Output_id:  SelU.26.cysteine
----------  ----------------
-Species        Chlorocebus sabaeus                          -Taxid 60711
-Target         /home/U73970/luke/Selenoprofiles/selenoprofiles_3_installation/genome_linked/genome.fa
-Chromosome (-) gi|511782584|gb|CM001949.1|
-Program        genewise
-Query name     gi|149690874|ref|XP_001496590.1| PREDICTED: similar to SFLQ611 [Equus caballus]
-Query range    14-244     length:244   coverage: 0.95
-Profile range  21-585     length:585   coverage: 0.97    sec_position: [286]
-ASI:           0.2993     (ignoring gaps: 0.4265)
-AWSIc:         0.6328     Z-score: 1.576
-AWSIw:         0.6661     Z-score: 1.816
-State          kept

------- alignment -------
Query   LKMFFLQDPSLFTMGMWSIGVGALGAAALALFLANTDVFLPKSQKAALEYLEDTDLKTLEKE <---Intron---> PRTFKAKELWEKNGAVIMAVRR
        |/| |||||| ||||||||| |||||||||| |||||||| | |||||||||| |||||||| <   1769nt   > ||| ||||||||||||||||||
Target  LEMSFLQDPSFFTMGMWSIGAGALGAAALALLLANTDVFLSKPQKAALEYLEDIDLKTLEKE                PRTLKAKELWEKNGAVIMAVRR
        cgattccgcattaagattaggggcggggtgtccgaaggtctaccaggcgtcggagcaacgag                caatagagctgaagggaaggca
        tatcttaacgttctgtgctgcgctgccctctttcacatttcacaacctaataatatactaa    gt     ag   acgctacaatgaaagctttctgg
        aagtccgcatcccggggcttaacggttcgaggtccacgtgcgcgaaaggcggtacgaaggg                aagtgaaggagaatatgtgtggg
                                                                                                            

Query   PGUFLCRE <---Intron---> EAMDLSLLKPKLDELGVPLYAVVKEQLSTEVEDFQPYFKGEIFLDEK <---Intron---> KKFYGPQRRKMML
        || ||||| <   3372nt   > || ||| ||  ||/||||||||||| / ||||||||||||||||||| <   1318nt   > |||||||||||| 
Target  PGCFLCRE                EAADLSSLKSMLDQLGVPLYAVVKEHIRTEVEDFQPYFKGEIFLDEK                KKFYGPQRRKMMF
        cgttctcg                ggggcttcaaatgccggcctgggagcaaaggggtccttaggatcgga                aattgccacaaat
        cggttgga   gt     ag    accatcctagttaatgtctacttaaatgcataatacatagatttaaa   gt     ag    aatagcaggattt
        actcctag                atgtgccgacggcggcccctggaggccgcaggtcgttcaaaccgtag                agtttaagggggt
          *                                                                                                 

Query   LGFVRLGVWRNFFRAWDRGISGNLEGEGFILGGVFVVGSGRQ <---Intron---> GILLEHREKEFGDKVNVDSVLEAARKIKPQTLASEEK
        /||/||||| ||||||/ | ||||||||||||||||||||/| <   4404nt   > ||||||||||||||||/ ||||||/ |||||||||/|
Target  MGFIRLGVWYNFFRAWNGGFSGNLEGEGFILGGVFVVGSGKQ                GILLEHREKEFGDKVNLLSVLEAAKMIKPQTLASEKK
        agtaccggttattcgtaggttgacggggtacgggtgggtgac                gaccgccgagtggagatctgcgggaaaaccatgtgaa
        tgttgtgtgaattgcgaggtcgatagagtttggttttgcgaa   gt     ag    gtttaagaaatgaatattcttaccattacactccaaa
        gatctgaggccccacgtacctacgaaaccctgatcggaaagg                cttcgcagaatacaacatttgattggcaagtgcagaa
                                                                                                       
------- positions -------
Exon 1    51416183     51416366
Exon 2    51414322     51414413
Exon 3    51410809     51410949
Exon 4    51409326     51409490
Exon 5    51404811     51404921

-------- features -------
None
--------- 3' seq --------
Total sequence length available downstream >= 6000
Sequence until first stop codon: 
TGA
 *