genewise output
Score 347.11 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00001362_2.0    1 EMSFLQDPSFFTMGMWSIGAGALGAAALALLLANTDVFLSKPQKAALEY 
                     EMSFLQDPSFFT+GMWSIGAGA GA ALALLLANTD+FLSK QKA LEY 
                     EMSFLQDPSFFTVGMWSIGAGAPGATALALLLANTDMFLSKSQKATLEY 
gi|511782585|-100685 gattccgcattaggattaggggcggagtgtccgaagatctatcagacgt 
                     atcttaacgttctgtgctgcgccgccctctttcacatttcacaacctaa 
                     agtccgcatcctgcggcttaatggctcgagggccacgtgtgcgagaggc 


SPP00001362_2.0   50 LEDIDLKTLEKEPRTLKAKELWEKNGA                       
                     LED+DLKTLEKEPRTLKAKEL    G                        
                     LEDVDLKTLEKEPRTLKAKELCGVGGG                       
gi|511782585|-100538 cggggcaacgagcaatagagctggggg                       
                     taatatactaaacgctacaatggtggg                       
                     ggtacgatgggaagtgaaggacggggg                       


//
Making a G in phase 2 intron
>gi|511782585|gb|CM001948.1|:subseq(68786748,200685).pep
EMSFLQDPSFFTVGMWSIGAGAPGATALALLLANTDMFLSKSQKATLEYLEDVDLKTLEK
EPRTLKAKELCGVGGGGAMIMAGRRPGCFLRXEEAADLSSLKPMLDELGVPLFAGVKEHI
RTEVKDFQPYFKGEIFLDEKKKFYGPQRRKMMFMGFLHLGVWYFFXAWNGGFSGNLEGEG
FILRDVFVVGSGNEGILLEHXEKXFGDKVNLFCLVWEAAEMIKPQ
//
>gi|511782585|gb|CM001948.1|:subseq(68786748,200685).[100685:100073].sp
GAAATGTCTTTCCTCCAGGACCCAAGTTTCTTCACTGTGGGCATGTGGTCCATTGGTGCA
GGAGCTCCGGGGGCCACTGCCTTGGCATTGCTGCTGGCCAACACAGACATGTTTCTGTCT
AAGTCCCAGAAAGCGACACTGGAGTACCTGGAGGATGTAGACCTGAAAACTCTGGAGAAG
GAACCAAGGACTTTGAAAGCAAAGGAGCTATGCGGGGTGGGGGGGGGGGGAGCTATGATT
ATGGCTGGGCGGAGGCCAGGCTGTTTCCTCCGTTGAGAGGAAGCTGCGGATCTGTCCTCC
CTGAAACCCATGTTGGACGAGCTGGGAGTCCCCCTCTTTGCAGGGGTAAAGGAGCACATC
AGGACTGAAGTGAAGGATTTCCAGCCTTATTTCAAAGGAGAAATCTTCCTGGATGAAAAG
AAAAAGTTCTATGGTCCACAAAGGCGGAAGATGATGTTTATGGGATTTCTCCATCTGGGA
GTGTGGTACTTCTTCTGAGCCTGGAATGGAGGCTTCTCTGGAAACCTGGAAGGAGAAGGC
TTCATCCTCAGGGACGTTTTCGTGGTAGGATCAGGAAACGAGGGGATTCTTCTCGAGCAC
>gi|511782585|gb|CM001948.1|:subseq(68786748,200685).[100073:100066].sp
GAGAAA
>gi|511782585|gb|CM001948.1|:subseq(68786748,200685).[100062:99998].sp
TTTGGAGACAAAGTAAATCTGTTTTGTCTGGTTTGGGAAGCTGCTGAGATGATCAAACCA
CAG
//
gi|511782585|gb|CM001948.1|:subseq(68786748,200685)	GeneWise	match	100685	100075	328.74	-	.	gi|511782585|gb|CM001948.1|:subseq(68786748,200685)-genewise-prediction-1
gi|511782585|gb|CM001948.1|:subseq(68786748,200685)	GeneWise	cds	100685	100456	0.00	-	0	gi|511782585|gb|CM001948.1|:subseq(68786748,200685)-genewise-prediction-1
gi|511782585|gb|CM001948.1|:subseq(68786748,200685)	GeneWise	intron	100455	100445	0.00	-	.	gi|511782585|gb|CM001948.1|:subseq(68786748,200685)-genewise-prediction-1
gi|511782585|gb|CM001948.1|:subseq(68786748,200685)	GeneWise	cds	100444	100075	0.00	-	1	gi|511782585|gb|CM001948.1|:subseq(68786748,200685)-genewise-prediction-1
gi|511782585|gb|CM001948.1|:subseq(68786748,200685)	GeneWise	match	100073	100068	-12.08	-	.	gi|511782585|gb|CM001948.1|:subseq(68786748,200685)-genewise-prediction-2
gi|511782585|gb|CM001948.1|:subseq(68786748,200685)	GeneWise	cds	100073	100068	0.00	-	0	gi|511782585|gb|CM001948.1|:subseq(68786748,200685)-genewise-prediction-2
gi|511782585|gb|CM001948.1|:subseq(68786748,200685)	GeneWise	match	100062	100000	30.45	-	.	gi|511782585|gb|CM001948.1|:subseq(68786748,200685)-genewise-prediction-3
gi|511782585|gb|CM001948.1|:subseq(68786748,200685)	GeneWise	cds	100062	100000	0.00	-	0	gi|511782585|gb|CM001948.1|:subseq(68786748,200685)-genewise-prediction-3
//