genewise output
Score 341.34 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000100_2.0    1 MERQEESLSARPALETEGLRFLHTT                         
                     MER+E+SLSARPALETEGLRFLH T                         
                     MEREEDSLSARPALETEGLRFLHVT          V:V[gtg]       
gi|511782564|-102995 agcgggtttgccgcgaggcctccgaGGTGAGTC  Intron 1       
                     tagaaactccgcctacagtgttatc <1-----[102919:102258   
                     gggagtcgcgggcggcgagccgccg                         


SPP00000100_2.0   26      GSLLATYGWYIVFSCILLYVVFQKLSARLRALRQRQLDRAAAAV 
                          GSLLA+YGWYIVFSCILLYVVFQKLSARLRALRQRQL+RAAA+V 
                          GSLLASYGWYIVFSCILLYVVFQKLSARLRALRQRQLERAAASV 
gi|511782564|-102260 CAGTGgttcgatgttagtatacctggtcactgccagtacaccgcgggtg 
                     -1>  gcttcgaggatttggtttatttaatccgtgctgagatagcccct 
                          ctggcctcgccccccctccgctggtccggacgggggggatgttg 


SPP00000100_2.0   71                           PDVVVKRQEALAAARLKMQEELN 
                                               PDVVVKRQEALAAARLKMQEELN 
                               E:E[gaa]        PDVVVKRQEALAAARLKMQEELN 
gi|511782564|-102123 GGTTAGTG  Intron 2   TAGAAcggggaccggtgggctaacggca 
                      <1-----[102122:10094-1>  catttagaactcccgtataaata 
                                               tttttaaaataattagagaaaat 


SPP00000100_2.0   95 AQVEKHKEKLKQ                       LEEEKRRQKIEMWD 
                     AQ+EKHKEKLKQ                       LEEEKRRQKIEMWD 
                     AQIEKHKEKLKQ                       LEEEKRRQKIEMWD 
gi|511782564|-100873 gcagacagacacGTATGAA  Intron 3   CAGcgggaaacaagatg 
                     cataaaaaataa<0-----[100837:10026-0>taaaaggaatatga 
                     gatagtgaagag                       taaaagaggtaggc 


SPP00000100_2.0  121 SMQEGKSYKGNAKKPQ                       EEDSPGPSTS 
                     SMQEGKSYKGNAKKPQ                       EEDSPGPSTS 
                     SMQEGKSYKGNAKKPQ                       EEDSPGPSTS 
gi|511782564|-100222 aacggaatagagaaccGTGACTG  Intron 4   CAGgggacgctat 
                     gtaagagaagacaaca<0-----[100174:10008-0>aaagcgcccc 
                     cgaacatcaataggtg                       gacttgtcta 


SPP00000100_2.0  147 S-VLKRKSDRKPLRGG                          YNPLSGE 
                     S V+KRKSDRKPLRGG                          YNPLSGE 
                     SVVVKRKSDRKPLRGG          G:G[ggt]        YNPLSGE 
gi|511782564|-100050 tgggacatgcactcggGGTAAGCA  Intron 5   TAGGTtacttgg 
                     ctttagacagactggg <1-----[100001:98411-1>  aactcga 
                     tccgagagcagggggt                          tctgtta 


SPP00000100_2.0  170 GGGACSWRPGRRGPSSGG                                
                     GGG+CSWRPGRRGPSSGG                                
                     GGGSCSWRPGRRGPSSGG                                
gi|511782564|g-98387 gggatttacgcagcttgg                                
                     gggggcggcggggcccgg                                
                     atacccgatacacaatta                                


//
Making a V in phase 1 intron
Making a E in phase 1 intron
Making a G in phase 1 intron
>gi|511782564|gb|CM001970.1|:subseq(19629328,202995).pep
MEREEDSLSARPALETEGLRFLHVTVGSLLASYGWYIVFSCILLYVVFQKLSARLRALRQ
RQLERAAASVEPDVVVKRQEALAAARLKMQEELNAQIEKHKEKLKQLEEEKRRQKIEMWD
SMQEGKSYKGNAKKPQEEDSPGPSTSSVVVKRKSDRKPLRGGGYNPLSGEGGGSCSWRPG
RRGPSSGG
//
>gi|511782564|gb|CM001970.1|:subseq(19629328,202995).[102995:98332].sp
ATGGAGCGGGAAGAGGATTCCTTGTCCGCGCGGCCGGCCCTGGAGACCGAGGGACTGCGC
TTCCTGCACGTCACGGTGGGCTCTTTGCTGGCCAGCTATGGCTGGTACATCGTCTTCAGC
TGCATCCTTCTCTACGTGGTCTTTCAGAAGCTTTCCGCCCGGCTGAGAGCCTTGAGGCAG
AGGCAGCTGGAGCGAGCTGCGGCTTCTGTGGAACCTGATGTTGTTGTTAAACGACAAGAA
GCTTTAGCAGCTGCTCGATTGAAAATGCAAGAAGAACTAAATGCGCAAATTGAAAAGCAT
AAGGAAAAACTGAAACAGCTTGAAGAAGAAAAAAGGAGACAGAAGATTGAAATGTGGGAC
AGCATGCAAGAAGGCAAAAGTTACAAAGGAAATGCAAAGAAGCCTCAGGAGGAAGACAGT
CCTGGGCCTTCCACTTCATCTGTCGTCGTGAAACGGAAATCGGACCGAAAGCCGTTGCGG
GGGGGTGGTTATAACCCTTTGTCTGGTGAAGGAGGTGGAAGCTGCTCCTGGAGACCTGGA
CGCAGAGGCCCATCATCTGGTGGA
//
gi|511782564|gb|CM001970.1|:subseq(19629328,202995)	GeneWise	match	102995	98334	341.34	-	.	gi|511782564|gb|CM001970.1|:subseq(19629328,202995)-genewise-prediction-1
gi|511782564|gb|CM001970.1|:subseq(19629328,202995)	GeneWise	cds	102995	102920	0.00	-	0	gi|511782564|gb|CM001970.1|:subseq(19629328,202995)-genewise-prediction-1
gi|511782564|gb|CM001970.1|:subseq(19629328,202995)	GeneWise	intron	102919	102258	0.00	-	.	gi|511782564|gb|CM001970.1|:subseq(19629328,202995)-genewise-prediction-1
gi|511782564|gb|CM001970.1|:subseq(19629328,202995)	GeneWise	cds	102257	102123	0.00	-	2	gi|511782564|gb|CM001970.1|:subseq(19629328,202995)-genewise-prediction-1
gi|511782564|gb|CM001970.1|:subseq(19629328,202995)	GeneWise	intron	102122	100945	0.00	-	.	gi|511782564|gb|CM001970.1|:subseq(19629328,202995)-genewise-prediction-1
gi|511782564|gb|CM001970.1|:subseq(19629328,202995)	GeneWise	cds	100944	100838	0.00	-	2	gi|511782564|gb|CM001970.1|:subseq(19629328,202995)-genewise-prediction-1
gi|511782564|gb|CM001970.1|:subseq(19629328,202995)	GeneWise	intron	100837	100265	0.00	-	.	gi|511782564|gb|CM001970.1|:subseq(19629328,202995)-genewise-prediction-1
gi|511782564|gb|CM001970.1|:subseq(19629328,202995)	GeneWise	cds	100264	100175	0.00	-	0	gi|511782564|gb|CM001970.1|:subseq(19629328,202995)-genewise-prediction-1
gi|511782564|gb|CM001970.1|:subseq(19629328,202995)	GeneWise	intron	100174	100081	0.00	-	.	gi|511782564|gb|CM001970.1|:subseq(19629328,202995)-genewise-prediction-1
gi|511782564|gb|CM001970.1|:subseq(19629328,202995)	GeneWise	cds	100080	100002	0.00	-	0	gi|511782564|gb|CM001970.1|:subseq(19629328,202995)-genewise-prediction-1
gi|511782564|gb|CM001970.1|:subseq(19629328,202995)	GeneWise	intron	100001	98411	0.00	-	.	gi|511782564|gb|CM001970.1|:subseq(19629328,202995)-genewise-prediction-1
gi|511782564|gb|CM001970.1|:subseq(19629328,202995)	GeneWise	cds	98410	98334	0.00	-	2	gi|511782564|gb|CM001970.1|:subseq(19629328,202995)-genewise-prediction-1
//