genewise output
Score 224.39 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000087_2.0    1 MSFCSFFGGEVFQNHFEP                          VYVCA 
                     MSFCSFFGGEVFQNHFEP                          VYVCA 
                     MSFCSFFGGEVFQNHFEP          G:G[ggc]        VYVCA 
gi|511782588|-102391 atttattggggtcactgcGGTTGGTC  Intron 1   CAGGCgtgtg 
                     tctggttggattaaatac <1-----[102336:10064-1>  tatgc 
                     ggcccccgcgtcgtctgc                          ttgtc 


SPP00000087_2.0   25 KCGYELFSSRSKYAHSSPWPAFTETIHADSVAKRPEHNRSEALK      
                     KCGYELFSSRSKYAHSSPWPAFTETIHADSVAKRPEHNR EALK      
                     KCGYELFSSRSKYAHSSPWPAFTETIHADSVAKRPEHNRPEALK      
gi|511782588|-100623 atgtgcttactatgcttctcgtagaacggaggaccgcaccggta      
                     aggaattcggcaacacccgcctcactacagtcagcaaagcacta      
                     gtctggccccggtacgccggactgctctccgcgtagctatacgg      


SPP00000087_2.0   69                        VSCGKCGNGLGHEFLNDGPKPGQSRF 
                                            VSCGKCGNGLGHEFLNDGPKPGQSRF 
                                            VSCGKCGNGLGHEFLNDGPKPGQSRF 
gi|511782588|-100491 GTGAGGG  Intron 2   CAGgttgatgagtgcgtcaggcacgctct 
                     <0-----[100491:10014-0>tcggaggagtgaattaagcacgacgt 
                                            gctcgtctggccgcgctccgaggcac 


SPP00000087_2.0   95 XIFSSSLKFVPK                          KETSASQGH   
                     XIFSSSLKFVPK                          KETSASQGH   
                     XIFSSSLKFVPK          G:G[ggc]        KETSASQGH   
gi|511782588|-100062 tataatcatgcaGGTGAGCT  Intron 3   CAGGCagatgtcgc   
                     gttggctattca <1-----[100025:98589-1>  aaccccaga   
                     aacccgggtcta                          aattccggc   


//
Making a G in phase 1 intron
Making a G in phase 1 intron
>gi|511782588|gb|CM001945.1|:subseq(1738359,202391).pep
MSFCSFFGGEVFQNHFEPGVYVCAKCGYELFSSRSKYAHSSPWPAFTETIHADSVAKRPE
HNRPEALKVSCGKCGNGLGHEFLNDGPKPGQSRFXIFSSSLKFVPKGKETSASQGH
//
>gi|511782588|gb|CM001945.1|:subseq(1738359,202391).[102391:98558].sp
ATGTCGTTCTGCAGCTTCTTCGGGGGCGAGGTTTTCCAGAATCACTTTGAGCCCGGCGTT
TATGTGTGTGCCAAGTGTGGCTATGAGCTGTTCTCCAGCCGCTCGAAGTATGCACACTCG
TCCCCCTGGCCGGCATTCACTGAGACCATTCACGCTGACAGCGTGGCCAAGCGTCCAGAG
CACAATCGACCTGAAGCCTTGAAGGTGTCCTGTGGCAAGTGTGGCAATGGGTTGGGCCAC
GAGTTCCTGAACGATGGCCCCAAGCCAGGGCAGTCCCGATTCTGAATATTCAGCAGCTCG
CTGAAGTTTGTCCCTAAAGGCAAAGAAACTTCTGCCTCCCAGGGGCAC
//
gi|511782588|gb|CM001945.1|:subseq(1738359,202391)	GeneWise	match	102391	98560	224.39	-	.	gi|511782588|gb|CM001945.1|:subseq(1738359,202391)-genewise-prediction-1
gi|511782588|gb|CM001945.1|:subseq(1738359,202391)	GeneWise	cds	102391	102337	0.00	-	0	gi|511782588|gb|CM001945.1|:subseq(1738359,202391)-genewise-prediction-1
gi|511782588|gb|CM001945.1|:subseq(1738359,202391)	GeneWise	intron	102336	100641	0.00	-	.	gi|511782588|gb|CM001945.1|:subseq(1738359,202391)-genewise-prediction-1
gi|511782588|gb|CM001945.1|:subseq(1738359,202391)	GeneWise	cds	100640	100492	0.00	-	2	gi|511782588|gb|CM001945.1|:subseq(1738359,202391)-genewise-prediction-1
gi|511782588|gb|CM001945.1|:subseq(1738359,202391)	GeneWise	intron	100491	100141	0.00	-	.	gi|511782588|gb|CM001945.1|:subseq(1738359,202391)-genewise-prediction-1
gi|511782588|gb|CM001945.1|:subseq(1738359,202391)	GeneWise	cds	100140	100026	0.00	-	0	gi|511782588|gb|CM001945.1|:subseq(1738359,202391)-genewise-prediction-1
gi|511782588|gb|CM001945.1|:subseq(1738359,202391)	GeneWise	intron	100025	98589	0.00	-	.	gi|511782588|gb|CM001945.1|:subseq(1738359,202391)-genewise-prediction-1
gi|511782588|gb|CM001945.1|:subseq(1738359,202391)	GeneWise	cds	98588	98560	0.00	-	2	gi|511782588|gb|CM001945.1|:subseq(1738359,202391)-genewise-prediction-1
//