Output_id:  SelR.3.selenocysteine
----------  ---------------------
-Species        Chlorocebus sabaeus                          -Taxid 60711
-Target         /home/U73970/luke/Selenoprofiles/selenoprofiles_3_installation/genome_linked/genome.fa
-Chromosome (-) gi|511782588|gb|CM001945.1|
-Program        genewise
-Query name     gi|215794531|pdb|2KAO|A Chain A, Structure Of Reduced Mouse Methionine Sulfoxide Reductase B1 (Sec95cys Mutant)
-Query range    1-116      length:124   coverage: 0.94
-Profile range  1-546      length:792   coverage: 0.69    sec_position: [448]
-ASI:           0.2549     (ignoring gaps: 0.3774)
-AWSIc:         0.48     Z-score: -3.341
-AWSIw:         0.5744     Z-score: -2.953
-State          kept

------- alignment -------
Query   MSFCSFFGGEVFQNHFEPG <---Intron---> VYVCAKCSYELFSSHSKYAHSSPWPAFTETIHPDSVTKCPEKNRPEALK <---Intron---> 
        ||||||||||||||||||| <   1696nt   > ||||||| |||||| ||||||||||||||||| ||| | || ||||||| <   351nt    > 
Target  MSFCSFFGGEVFQNHFEPG                VYVCAKCGYELFSSRSKYAHSSPWPAFTETIHADSVAKRPEHNRPEALK                
        atttattggggtcactgcg                gtgtgatgtgcttactatgcttctcgtagaacggaggaccgcaccggta                
        tctggttggattaaatac    gt     ag   gtatgcaggaattcggcaacacccgcctcactacagtcagcaaagcacta   gt     ag    
        ggcccccgcgtcgtctgc                cttgtcgtctggccccggtacgccggactgctctccgcgtagctatacgg                
                                                                                                            

Query   VSCGKCGNGLGHEFLNDGPKRGQSRFUIFSSSLKFVPKG <---Intron---> KEAAASQGH
        |||||||||||||||||||| |||||||||||||||||| <   1437nt   > || /|||||
Target  VSCGKCGNGLGHEFLNDGPKPGQSRFUIFSSSLKFVPKG                KETSASQGH
        gttgatgagtgcgtcaggcacgctcttataatcatgcag                agatgtcgc
        tcggaggagtgaattaagcacgacgtgttggctattca    gt     ag   gaaccccaga
        gctcgtctggccgcgctccgaggcacaacccgggtcta                caattccggc
                                  *                                     
------- positions -------
Exon 1    1840696      1840750
Exon 2    1838851      1838999
Exon 3    1838385      1838499
Exon 4    1836919      1836947

-------- features -------
None
--------- 3' seq --------
Total sequence length available downstream >= 6000
Sequence until first stop codon: 
TAG
 *