Output_id:  SelK.9.selenocysteine
----------  ---------------------
-Species        Chlorocebus sabaeus                          -Taxid 60711
-Target         /home/U73970/luke/Selenoprofiles/selenoprofiles_3_installation/genome_linked/genome.fa
-Chromosome (-) gi|511782571|gb|CM001963.1|
-Program        exonerate
-Query name     gi|87047634|gb|ABD18450.1| MODIFIED selenoprotein K [Sus scrofa]
-Query range    1-94       length:94    coverage: 1.0
-Profile range  1-152      length:153   coverage: 0.99    sec_position: [150]
-ASI:           0.4523     (ignoring gaps: 0.5134)
-AWSIc:         0.737     Z-score: 1.367
-AWSIw:         0.7512     Z-score: 1.386
-State          kept

------- alignment -------
Query   MVYISNG <---Intron---> QALDSRSQSPWRLSFITDFFWGIAEFVVLF <---Intron---> FRTLLQQDVKKRRGYGGSSDSRYDDGRG <-
        ||||||| <   3389nt   > | |||||||||||||||||||||||||||| <   1450nt   > |/||||||||||| || ||||||||||| < 
Target  MVYISNG                QVLDSRSQSPWRLSFITDFFWGIAEFVVLF                FKTLLQQDVKKRRSYGNSSDSRYDDGRG   
        agtatag                cgtgacactctatttaagtttgaggtggtt                taaccccggaaaaatgattgtatgggag   
        ttatca    gt     ag   gattagggaccggtcttcattggtcattttt   gt     ag    tacttaaataagggagaccacgaaaggg   
        gtccgc                aaggccgtgtagaatcaatccgaatgtgtg                tcatgtgatgaaaactacattcatttaa    
                                                                                                            

Query   --Intron---> PPGNPPRRMGRINHLRGPNPPPMAGGUGR
          942nt    > ||||||||||||||||||/||||||||||
Target               PPGNPPRRMGRINHLRGPSPPPMAGGUGR
                     ccgacccaagaaacccgcacccagggtga
        gt     ag    ccgaccggtggtaatggcgccctcggggg
                    gagactcaagtacttgtcttttaggtaaag
                                               *  
------- positions -------
Exon 1    15274714     15274732
Exon 2    15271234     15271324
Exon 3    15269700     15269783
Exon 4    15268670     15268757

-------- features -------
None
--------- 3' seq --------
Total sequence length available downstream >= 6000
Sequence until first stop codon: 
TAA
 *