Output_id:  SelH.1.selenocysteine
----------  ---------------------
-Species        Chlorocebus sabaeus                          -Taxid 60711
-Target         /home/U73970/luke/Selenoprofiles/selenoprofiles_3_installation/genome_linked/genome.fa
-Chromosome (-) gi|511782591|gb|CM001941.1|
-Program        genewise
-Query name     gi|194218122|ref|XP_001915098.1| PREDICTED: similar to Selenoprotein H [Equus caballus]
-Query range    1-121      length:121   coverage: 1.0
-Profile range  1-332      length:332   coverage: 1.0    sec_position: [186]
-ASI:           0.3245     (ignoring gaps: 0.3893)
-AWSIc:         0.5936     Z-score: 0.839
-AWSIw:         0.6027     Z-score: 0.679
-State          kept

------- alignment -------
Query   MASRGRKRKAEA-VVAVAEKREKLTSGGKGVEEVTVVIEHC <---Intron---> TSURVYGRNAAALSQALRLEAPELPVKVNPAKPRRGSFEVTLL
        || ||||||||| /|| ||||||| / |/|/|| ||||||| <    89nt    > |||||||||||||||||||||||||||||| ||||||||||||
Target  MAPRGRKRKAEAAMVAAAEKREKLANSGEGMEEATVVIEHC                TSURVYGRNAAALSQALRLEAPELPVKVNPTKPRRGSFEVTLL
        agccgaacaggggagggggacgacgaagggagggaggagct                aatcgtgcagggcacgcccggcgccgagacaaccagatggacc
        tccgggagacaccttcccaagaatcaggagtaacctttaag   gt     ag    cgggtaggaccctgactgtaccatctataccacggggtatctt
        gtcctggggtgcggccacggagggaccggagggacttcgt                cgcacctgcccgcgtgggcggcagtaaggcgcgcggcccagggg
                                                                   *                                        

Query   RPDGSS <---Intron---> AELWTGIKKGPPRKLKFPEPQEVVEELKKYLS
        |||||| <   143nt    > ||||||||||||||||||||||||||||||||
Target  RPDGSS                AELWTGIKKGPPRKLKFPEPQEVVEELKKYLS
        ccggaa                ggctagaaagcccacatcgccgggggtaatct
        gcagg    gt     ag   gcatgcgtaagccgatatcacaattaataaatc
        cgccc                tggcgtgtgggcacacactgtggggaggggcgg
                                                              
------- positions -------
Exon 1    15488727     15488848
Exon 2    15488492     15488637
Exon 3    15488251     15488348

-------- features -------
None
--------- 3' seq --------
Total sequence length available downstream >= 6000
Sequence until first stop codon: 
TAG
 *