genewise output
Score 592.84 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000146_2.0    1 MAASLWMGD                       LEPYMDENFISRAFATM 
                     MAASLWMGD                       LEPYMDENFISRAFATM 
                     MAASLWMGD                       LEPYMDENFISRAFATM 
gi|511782573|-124487 aggactaggGTGAGTG  Intron 1   CAGcgctaggatatagtgaa 
                     tccgtgtga<0-----[124460:12396-0>tacataaattcgctcct 
                     ggccgggcc                       gaccgtgccccattccg 


SPP00000146_2.0   27 GETVMSVKIIRNRLT                          IPAGYCFV 
                     GETVMSVKIIRNRLT                          IPAGYCFV 
                     GETVMSVKIIRNRLT           G:G[ggg]       IPAGYCFV 
gi|511782573|-123908 ggagaagaaacaccaGGGTAAGTC  Intron 2   CAGGacggtttg 
                     gacttgtattgagtc  <2-----[123861:12094-2> tccgagtt 
                     gggagccatcaccct                          catcccta 


SPP00000146_2.0   51 EFADLATAEKCLHKINGKPLPGATP                       A 
                     EFADLATAEKCLHKINGKPLPGATP                       A 
                     EFADLATAEKCLHKINGKPLPGATP                       A 
gi|511782573|-120916 gtggtgaggattcaaagacccggacGTAAGGA  Intron 3   CAGg 
                     atcatcccaagtaatagactcgccc<0-----[120841:12022-0>c 
                     acatgcttggtgtattgactaacat                       g 


SPP00000146_2.0   77 KRFKLNYATYGKQPDN                          PEYSLFV 
                     KRFKLNYATYGKQPDN                          PEYSLFV 
                     KRFKLNYATYGKQPDN           S:S[agc]       PEYSLFV 
gi|511782573|-120225 actacatgatgaccgaAGGTAGGTA  Intron 4   CAGCcgttctg 
                     agtataaccagaacaa  <2-----[120175:11492-2> caacttt 
                     attagctcttgaaatc                          tgtcctg 


SPP00000146_2.0  101 GDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVS              
                     GDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVS              
                     GDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVS              
gi|511782573|-114900 ggcacgggggactgttgagtcttcggaggtgcaggt              
                     gatccataagttaatttataccggggatttaacgtc              
                     gcgcacgttcggtacccacccctgacggtgcgacgt              


SPP00000146_2.0  137                           GYGFVKFTDELEQKRALTECQGA 
                                               GYGFVKFTDELEQKRALTECQGA 
                                K:K[aag]       GYGFVKFTDELEQKRALTECQGA 
gi|511782573|-114792 AAGTAAGGC  Intron 5   CAGGgtgtgataggcgcacgcagtcgg 
                       <2-----[114790:11185-2> gagttatcaataaagctcagagc 
                                               ttttgacatagaggacgggcgaa 


SPP00000146_2.0  161 VGLGSKPVRLSVAIPK                          SRVKPVE 
                     VGLG+KPVRLSVAIPK                          SRVKPVE 
                     VGLGAKPVRLSVAIPK           A:A[gcg]       SRVKPVE 
gi|511782573|-111780 ggcggacgccaggacaGCGTGAGTC  Intron 6   AAGGacgacgg 
                     tgtgcactgtgtctca  <2-----[111730:10796-2> ggtacta 
                     gaggtgtgggcgacta                          ctagaga 


SPP00000146_2.0  185 YSQMYSYSYNQYYQQYQNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQ   
                     YSQMYSYSYNQYYQQYQNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQ   
                     YSQMYSYSYNQYYQQYQNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQ   
gi|511782573|-107942 tacatatatacttcctcattgctgtgcaagatatatcctgtacaaac   
                     agatagagaaaaaaaaaaaacaggaaaacggagagacaagacagcta   
                     ttggctccccgttggcgccttggctcgcaccccctccgtctcgccgg   


SPP00000146_2.0  232                        TYEEVGDDALE                
                                            TYEEVGDDALE                
                                            TYEEVGDDALE                
gi|511782573|-107801 GTAACCA  Intron 7   CAGatgggggggtg                
                     <0-----[107801:10726-0>caaatgaacta                
                                            ataatattaga                


SPP00000146_2.0  243                           PMPQLDVTEANKEFMEQSEELYD 
                                               PMPQLDVTEANKEFMEQSEELYD 
                               D:D[gac]        PMPQLDVTEANKEFMEQSEELYD 
gi|511782573|-107230 GGTAAGGG  Intron 8   CAGACcacccggaggaagtagcaggctg 
                      <1-----[107229:10013-1>  ctcatatcacaaattaagaataa 
                                               cgaggtgtgccaacgagtgggtt 


SPP00000146_2.0  267 ALMDCHWQPLDTVSSEIPAMM                             
                     ALMDCHWQPLDTVSSEIPAMM                             
                     ALMDCHWQPLDTVSSEIPAMM                             
gi|511782573|-100062 gcagtctcccgagttgacgaa                             
                     cttagagactactccatcctt                             
                     tggctcggcgcagtagctcgg                             


//
Making a G in phase 2 intron
Making a S in phase 2 intron
Making a K in phase 2 intron
Making a A in phase 2 intron
Making a D in phase 1 intron
>gi|511782573|gb|CM001961.1|:subseq(104115074,223959).pep
MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK
CLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY
PSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGAKPVRLSVAIPKASRV
KPVEYSQMYSYSYNQYYQQYQNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQTYEEVGDDA
LEDPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIPAMM
//
>gi|511782573|gb|CM001961.1|:subseq(104115074,223959).[124487:99998].sp
ATGGCGGCCAGCCTGTGGATGGGCGACCTGGAACCCTACATGGATGAGAACTTCATCTCC
AGAGCTTTTGCCACCATGGGGGAGACGGTAATGAGCGTCAAAATTATCCGAAACCGCCTC
ACTGGGATCCCAGCTGGCTACTGCTTTGTAGAATTCGCAGATTTGGCCACTGCTGAGAAG
TGTTTGCATAAAATTAATGGGAAACCCCTTCCAGGAGCCACACCTGCGAAACGTTTTAAA
CTGAACTATGCCACTTATGGGAAACAACCAGATAACAGCCCTGAGTATTCCCTCTTTGTG
GGGGACCTGACCCCAGACGTGGATGATGGCATGCTGTATGAATTCTTCGTCAAAGTCTAC
CCCTCCTGTCGGGGAGGCAAGGTGGTTTTGGACCAGACAGGCGTGTCTAAGGGTTATGGT
TTTGTGAAATTCACAGATGAACTGGAACAGAAGCGAGCCCTGACGGAGTGCCAGGGAGCA
GTGGGACTGGGGGCTAAGCCTGTGCGGCTGAGCGTGGCAATCCCTAAAGCGAGCCGTGTA
AAGCCAGTGGAATATAGTCAGATGTACAGTTACAGCTACAACCAGTATTATCAGCAGTAC
CAGAACTACTATGCTCAGTGGGGCTATGACCAGAACACAGGCAGCTACAGCTACAGTTAC
CCCCAGTATGGCTATACCCAGAGCACCATGCAGACATATGAAGAAGTTGGAGATGATGCA
TTGGAAGACCCCATGCCACAGCTGGATGTGACTGAGGCCAACAAAGAATTCATGGAACAG
AGTGAGGAGCTGTATGATGCTCTGATGGACTGTCACTGGCAGCCCCTGGACACAGTGTCT
TCAGAGATCCCTGCCATGATG
//
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	match	124487	100000	592.84	-	.	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	cds	124487	124461	0.00	-	0	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	intron	124460	123960	0.00	-	.	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	cds	123959	123862	0.00	-	0	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	intron	123861	120942	0.00	-	.	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	cds	120941	120842	0.00	-	1	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	intron	120841	120229	0.00	-	.	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	cds	120228	120176	0.00	-	0	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	intron	120175	114923	0.00	-	.	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	cds	114922	114791	0.00	-	1	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	intron	114790	111851	0.00	-	.	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	cds	111850	111731	0.00	-	1	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	intron	111730	107965	0.00	-	.	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	cds	107964	107802	0.00	-	1	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	intron	107801	107264	0.00	-	.	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	cds	107263	107230	0.00	-	0	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	intron	107229	100134	0.00	-	.	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
gi|511782573|gb|CM001961.1|:subseq(104115074,223959)	GeneWise	cds	100133	100000	0.00	-	2	gi|511782573|gb|CM001961.1|:subseq(104115074,223959)-genewise-prediction-1
//