Output_id:  SPS.5.threonine
----------  ---------------
-Species        Chlorocebus sabaeus                          -Taxid 60711
-Target         /home/U73970/luke/Selenoprofiles/selenoprofiles_3_installation/genome_linked/genome.fa
-Chromosome (+) gi|511782583|gb|CM001950.1|
-Program        genewise
-Query name     gi|73949038|ref|XP_857465.1| PREDICTED: similar to selenophosphate synthetase isoform 5 [Canis familiaris]
-Query range    1-397      length:397   coverage: 1.0
-Profile range  378-1232   length:1325  coverage: 0.65    sec_position: [551]
-ASI:           0.3151     (ignoring gaps: 0.3608)
-AWSIc:         0.6088     Z-score: -0.378
-AWSIw:         0.6133     Z-score: -0.447
-State          kept

------- alignment -------
Query   MSTRESFNPESYELDKSFRLTRFTELKGUGCKVPQDVLQKLLESLQENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVD-DPYMM
        | |||||||||||||/|| ||||||/|| | || ||||||||/||| ||||||/|||||||||| | |||||||||||| |||||||||||||/ |||| 
Target  MCTRESFNPESYELDRSFWLTRFTEMKGTGWKVSQDVLQKLLKSLQVNHFQEDKQFLGAVMPRLDIRMDTCVIPLRHGGRSLVQTTDYIYPIVEEDPYMT
        atacgttacgatgtgaattcaatagaagagtagtcggccatcattcgactcggactcgggacacgaaagatgactacggcttgcaagtatcaggggctaa
        tgcgactacagaataggtgtcgtcatagcggatcaattaattactataataaaaattgcttcgtatgtacgttctgagggcttaccaatacttaaacatc
        gtaggcccaatcagcgccgacactaggcacgagcatcaaaggataggctcaatggtgactgagtctagcttcttggctgtcgtacatctcgcaaactcga
                                    *                                                                       

Query   GRIACANVLSDLYAMGVTECDNMLMLLGISNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVL
        |||| |||||| ||/|||/|||||||||/|||||||| ||||||| | |||||||||||||||||||||||||||||||||||/||||||| ||||||||
Target  GRIASANVLSDFYAVGVTKCDNMLMLLGVSNKMTDREGDKVMPLINQDFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPSEFIMPDNTVPGDVLVL
        gaagagagcagttggggaatgaacaccggaaaaagagggagaccaacgtagggggggatgaggcagcactagcggggaagtccagtaacgaagcgggcgt
        ggtcgcattgatactgtcagaatttttgtgaatcagagaattcttaaataaccaacgcctcggacttacgtttggtccctgacgatttcaactcgatttt
        cgaatctcctcctaggcgatctgggctacttagtcgagtaggtgtcattatataaaagtacccaaaaccgtcgaactctccgctatcgactagaacgggg
                                                                                                            

Query   TKPLGTQVAVAVHQWLDIKRGGLKIEKLHGSASNEAPKTLLAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLP
        ||||||||||||||||||     ||/ /      |     |||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||
Target  TKPLGTQVAVAVHQWLDIPEKWNKIKLVFTQEDIE-----LAYQEAMMNMGRLNRTAAGLMHTFNAHAATDITGFGIWGHTQNLAKQQRNEVSFVIHNLP
        aaccgacgggggcctcgacgataaaacgtacggag-----cgtcggaaaagacaaagggcacatagcggagaagtgatgcacacgaccaaggttgacacc
        cactgcatctctaagtatcaagaatatttcaaata-----tcaaacttatggtagcccgttactacacccatcgtgtggacaatcaaagaatctttaatc
        aacggaggagtgcgggtttgagtgtaagctaatag-----gccggcggcgggccgataacgcgctccgctccgctgtgccggcgcggggcaggtatccca
                                                                                                            

Query   VLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPGATS
        |||||| ||||||||||||||||||||| |||||| /|||/|||||||||||||||||||||||||| |||||||| ||||||||| |||||| ||||
Target  VLAKMAVVSKACGNMFGLMHGTCPETSGSLLICLPLQQAAQFCAEIKSPKYGEGHQAWIIGIVEKGNCTARIIDKPGIIEVAPQVAPQNVNPTSGATS
        gcgaagggaagtgaatgcacgatcgatgaccattccccggcttggaatcatgggccgtaagaggagatagaaagacgaagggccggccagacatggat
        ttcatcttgacggattgttagcgcaccggtttgtctaaccatgcataccaagagaacgttgttaagagccgttaacgttatccatccaatacccgccc
        gtcggcggcgatacgcccgtgccagcacctgctaatgaatgctagagccattaccaagttgtaggcccacacacacgccgcaaagctatgtcatgcct
                                                                                                          
------- positions -------
Exon 1    85149797     85150975

-------- features -------
None
--------- 3' seq --------
Total sequence length available downstream >= 6000
Sequence until first stop codon: 
TAA
 *