genewise output
Score 280.72 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00001325_2.0    1 VSLVVNVASDCQLTDRNYLALKELHKEFGPSHFSVLAFPCNQFGESEPR 
                     VSLVVNVASDCQLTDRNYLALKELHKEFGPSHFSVLAFPCNQFGESEPR 
                     VSLVVNVASDCQLTDRNYLALKELHKEFGPSHFSVLAFPCNQFGESEPR 
gi|511782589|g100000 gtcggaggagtccagaattgcagccagtgctctagtgtctactggtgcc 
                     tctttatcgagatcagaatctaataaatgccatgttctcgaatgacacg 
                     taatacgttccacacatcaaggagcagtaaccccggttcctgtaaggcc 


SPP00001325_2.0   50 PSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLR            
                     PSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFL             
                     PSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLV            
gi|511782589|g100147 caagggttgaaatggatcatcaaaacgtgggcgtatcg            
                     cgaatactcgaaagtctcttaatattgcagacctgttt            
                     gcggaattaaaccaaacccccgtgtaaaaaatatattt            


SPP00001325_2.0   88                           -------WNFWKYLVNPEGQVVK 
                                                      WNFWKYLVNPEGQVVK 
                               -:D[gat]        SSKKEPRWNFWKYLVNPEGQVVK 
gi|511782589|g100261 GGTAAATA  Intron 1   TAGATttaagcatattatcgacggcgga 
                      <1-----[100262:10307-1>  ccaaacggatgaattacagatta 
                                               taggaaggttggttcctgtatgg 


SPP00001325_2.0  104 FWRPEEPIDVIRPDIAALVRK                             
                     FWRPEEPI+VIRPDIAALVR+                             
                     FWRPEEPIEVIRPDIAALVRQ                             
gi|511782589|g103147 ttacggcaggaacgaggcgac                             
                     tggcaactattgcatccttga                             
                     cggaggctaccgtcaatgtaa                             


//
Making a D in phase 1 intron
>gi|511782589|gb|CM001944.1|:subseq(51294294,203209).pep
VSLVVNVASDCQLTDRNYLALKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARK
NYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIE
VIRPDIAALVRQ
//
>gi|511782589|gb|CM001944.1|:subseq(51294294,203209).[100000:103209].sp
GTTTCACTAGTTGTAAACGTGGCTAGTGACTGCCAACTCACAGACAGAAATTACTTAGCA
CTGAAGGAACTGCACAAAGAGTTTGGACCATCCCACTTCAGCGTGTTGGCTTTTCCCTGC
AATCAGTTTGGAGAATCGGAGCCCCGCCCGAGCAAGGAGGTAGAATCTTTTGCAAGAAAA
AACTACGGAGTAACATTCCCCATCTTCCACAAGATTAAGATTCTAGGATCAGAAGGAGAA
CCTGCATTTAGATTTCTTGTTGATTCTTCAAAGAAGGAACCAAGGTGGAATTTTTGGAAG
TATCTTGTCAACCCTGAGGGTCAAGTTGTGAAGTTCTGGAGGCCAGAGGAGCCCATTGAA
GTCATCAGGCCTGACATAGCAGCTCTGGTTAGACAA
//
gi|511782589|gb|CM001944.1|:subseq(51294294,203209)	GeneWise	match	100000	103209	286.71	+	.	gi|511782589|gb|CM001944.1|:subseq(51294294,203209)-genewise-prediction-1
gi|511782589|gb|CM001944.1|:subseq(51294294,203209)	GeneWise	cds	100000	100261	0.00	+	0	gi|511782589|gb|CM001944.1|:subseq(51294294,203209)-genewise-prediction-1
gi|511782589|gb|CM001944.1|:subseq(51294294,203209)	GeneWise	intron	100262	103075	0.00	+	.	gi|511782589|gb|CM001944.1|:subseq(51294294,203209)-genewise-prediction-1
gi|511782589|gb|CM001944.1|:subseq(51294294,203209)	GeneWise	cds	103076	103209	0.00	+	2	gi|511782589|gb|CM001944.1|:subseq(51294294,203209)-genewise-prediction-1
//