Output_id:  GPx.12.cysteine
----------  ---------------
-Species        Chlorocebus sabaeus                          -Taxid 60711
-Target         /home/U73970/luke/Selenoprofiles/selenoprofiles_3_installation/genome_linked/genome.fa
-Chromosome (+) gi|511782576|gb|CM001958.1|
-Program        genewise
-Query name     gi|116667974|pdb|2I3Y|A Chain A, Crystal Structure Of Human Glutathione Peroxidase 5
-Query range    23-215     length:215   coverage: 0.9
-Profile range  105-445    length:445   coverage: 0.77    sec_position: [192]
-ASI:           0.4008     (ignoring gaps: 0.4603)
-AWSIc:         0.7232     Z-score: 0.731
-AWSIw:         0.7307     Z-score: 0.864
-State          kept

------- alignment -------
Query   MKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYUGLTAQYPE <---Intron---> LNALQEELKPYGLVVLGFPCNQFGKQEPGD
         /||||||||||||||||||||||||| ||||||||||||||||| |||||||| <   2258nt   > ||||||||||||||||||||||||||||||
Target  FQMDCHKDEKGTIYDYEAIALNKNEYVPFKQYVGKHILFVNVATYCGLTAQYPE                LNALQEELKPYGLVVLGFPCNQFGKQEPGD
        tcagtcaggagaatgtggagcaaagtgctactggacactgaggattgcagctcg                cagccggcactgcggcgtctactgacgcgg
        tatagaaaaagctaaaactctaaaaatctaaatgaattttatccaggtccaac    gt     ag   atactaaatacagttttgtcgaatgaaacga
        cggttcatgaccctctgccattgcattccggtgcgccccccgcccttgagatt                aatacgggggcttacggctcccatagaaaat
                                                     *                                                      

Query   NKEILPGLK <---Intron---> YVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLK <---Intron---> HSCPHPSEILGTFKSISWDPVKVHDI
        ||||||||| <   422nt    > ||||||||||/|||||||||||||||||||||| <   1545nt   > ||||||||||||||||||/|||||||
Target  NKEILPGLK                YVRPGGGFVPNFQLFEKGDVNGEKEQKVFSFLK                HSCPHPSEILGTFKSISWNPVKVHDI
        aagaccgca                tgccgggtgcatcctgagggaggagcagtatta                cttccctgatgatatattacgagcga
        aaattcgta   gt     ag    atgcgggttcatattaagatagaaaaattgtta   gt     ag    acgcaccattgctactcgactataat
        cagtttgc                gtctagaatattcgttgagtgttaaagaccccgg                cctttctgtgcacatacgctagctcc
                                                                                                            

Query   RWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKT-
        |||||||||||||||||||||/||||||||||||||||||| 
Target  RWNFEKFLVGPDGIPVMRWSHQATVSSVKTDILAYLKQFKTK
        ctatgatcggcggacgacttccgagatgaagacgttactaaa
        ggataatttgcagtcttggcaacctgctacattcataataca
        cgctagcgggttactcgcgccgtcccaagaccggcggacaca
                                                  
------- positions -------
Exon 1    44075582     44075741
Exon 2    44078000     44078117
Exon 3    44078540     44078639
Exon 4    44080185     44080388

-------- features -------
None
--------- 3' seq --------
Total sequence length available downstream >= 6000
Sequence until first stop codon: 
TAG
 *