Output_id:  GPx.7.selenocysteine
----------  --------------------
-Species        Chlorocebus sabaeus                          -Taxid 60711
-Target         /home/U73970/luke/Selenoprofiles/selenoprofiles_3_installation/genome_linked/genome.fa
-Chromosome (+) gi|511782587|gb|CM001946.1|
-Program        blast
-Query name     BLAST_QUERY_MASTER
-Query range    2-174      length:185   coverage: 0.94
-Profile range  2-367      length:445   coverage: 0.82    sec_position: [192]
-ASI:           0.2754     (ignoring gaps: 0.3523)
-AWSIc:         0.4974     Z-score: -1.688
-AWSIw:         0.5863     Z-score: -2.154
-State          kept

------- alignment -------
Query   TANQTIYDFSAKTLDGEEVSLSQY <---Intron---> RGKVLLIVNVASKUGFT-PQYTGLNALQEKYGPRGLVVLGFPCNQFGH <---Intron-
           /////|||| /||  |/| /| <    87nt    > || | // ||||/|| |   || |  |  /|   || /| |||||||  <   153nt  
Target  RCARSMHEFSAKDIDGHMVNLDKY                RGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGK            
        ctgctacgttgagaggcagacgat                agtgtagaaggtctgaaggataccggccgctggtgtcacgtctactga            
        ggcgctaatccaatagattataaa   cg     gc    ggttgttcatccaggacataacattatacgacaggtgttctcgaatga   ca     ca
        ctgccgcgtccgcccgcgtcgcgc                ggcgcccccgccgacgcagcctgtccgccactgctggcgccatcgcgg            
                                                             *                                              

Query   --> QEPGSNEEILNFLKYVRPGNGYGPNFPLFEKIDVNGENAHPLYTFLK <---Intron---> EECPGPLDL-IGDPKEIIWSPVGTNDIKWNFEK
          > |||||||||  |        ||   | /| || |||//||||/ //| <    27nt    >  /|    |/        /| | |     |    
Target      QEPGSNEEIKEF------AAGYNVKFDMFSKICVNGDDAHPLWKWMK                GKCVTSGDITAAGGGGAVWGPAGMRTPPW----
            cgcgaaggaagt------gggtagatgataaatgaggggccctataa                gatgatggaaggggggggtgcggacacct----
            aacggaaataat------ccgaatatattgatgtagaacactgagta   at     tg    gagtccgatcccggggctggccgtgcccg----
            ggagtcagcagc------cgccccaccgccgacgcgtcccggggggg                agcgctgctgtggttgtgggttggcatcg----
                                                                                                            

Query   FLVGRDGVPVKRYA----PTTKPESIE
           |//|    |/      |  |  / 
Target  ---GKNGSGWLRWGCWDPHTAWPPGVR
        ---gaagtgttatgttgccagtccgga
        ---gaagcggtgggggacaccgccgtg
        ---ggtcgggggggcgctctggttgaa
                                   
------- positions -------
Exon 1    874783       874854
Exon 2    874942       875085
Exon 3    875239       875361
Exon 4    875389       875547

-------- features -------
None
--------- 3' seq --------
Total sequence length available downstream >= 6000
Sequence until first stop codon: 
TGGCTGGGGGGGCGTGGGGGGGCCGCTGGGGACACTCATGTCCATGTGGCCTCCTGGAGACAGGATGGCTAG
 W  L  G  G  R  G  G  A  A  G  D  T  H  V  H  V  A  S  W  R  Q  D  G  *