genewise output
Score 418.93 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00001321_2.0    1 FQMDCHGGVSGTIYEYGALTIDGEEYIPFKQYIGKYVLFVNVASYXGLT 
                     FQMDCHGGVSGTIYEYGALTIDGEEYIPFKQY GKYVLFVNVASYXGLT 
                     FQMDCHGGVSGTIYEYGALTIDGEEYIPFKQYTGKYVLFVNVASYXGLT 
gi|511782570|g100000 tcagtcgggagaatgtggcaaggggtactactagatgctgaggattgca 
                     tatagaggtggctaaagctctagaaatctaaacgaattttatcgaggtc 
                     cggccttcgccctcgcacccttgggccccggctcaccctccgcccacgg 


SPP00001321_2.0   50 GQYI                          LNALQEELAPFGLVLLGFP 
                     GQYI                          LNALQEELAPFGLVLLGFP 
                     GQYI          E:E[gaa]        LNALQEELAPFGLVLLGFP 
gi|511782570|g100147 gctaGGTAAGAG  Intron 1   CAGAAcagccggcgctgcgccgtc 
                     gaat <1-----[100160:10156-1>  tactaaatcctgttttgtc 
                     cgct                          gtaaaagtaattgctcctc 


SPP00001321_2.0   74 CNQFGKQEPGENSEILPSL                          YVRP 
                     CNQFGKQEPGENSEILPSL                          YVRP 
                     CNQFGKQEPGENSEILPSL           K:K[aag]       YVRP 
gi|511782570|g101624 tactgacgcggatgaccacAAGTGAGTG  Intron 2   CAGGtgcc 
                     gaatgaaacgaacattcgt  <2-----[101683:10210-2> atgc 
                     ccataagaacgcagctccc                          tcaa 


SPP00001321_2.0   98 GGGFVPNFQLFEKGDVNGEKEQKFYTFLK                     
                     GGGFVPNFQLFEKGDVNGEKEQKFYTFLK                     
                     GGGFVPNFQLFEKGDVNGEKEQKFYTFLK                     
gi|511782570|g102116 gggtgcatcctgagggaggagcattatcaGTGAGTG  Intron 3    
                     gggttcatattaagatagaaaaatactta<0-----[102203:102580
                     tactcttcgctgagtgtagaggacctcag                     


SPP00001321_2.0  127    NSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPVMRWH 
                        NSCPPTSELLGTSDRLFWEPMKV DIRWNFEKFLVGPDGIPVMRWH 
                        NSCPPTSELLGTSDRLFWEPMKVQDIRWNFEKFLVGPDGIPVMRWH 
gi|511782570|g102578 TAGattccatgccgatgccttgcaagcgactatgatcggcggacgactc 
                     -0>acgccccattgccagttgactataatggataatttgcagtcttgga 
                        ccttccggcgtatccccgacggcgcccgctggcgggattatcgcgc 


SPP00001321_2.0  173 HRTTISNVKMDILSYMRR                                
                     HRTTISNVKMDILSYMRR                                
                     HRTTISNVKMDILSYMRR                                
gi|511782570|g102719 ccaaaaagaagacttaac                                
                     agcctgatatattcatgg                                
                     cgcgcctcggccgccggg                                


//
Making a E in phase 1 intron
Making a K in phase 2 intron
>gi|511782570|gb|CM001964.1|:subseq(53481652,202772).pep
FQMDCHGGVSGTIYEYGALTIDGEEYIPFKQYTGKYVLFVNVASYXGLTGQYIELNALQE
ELAPFGLVLLGFPCNQFGKQEPGENSEILPSLKYVRPGGGFVPNFQLFEKGDVNGEKEQK
FYTFLKNSCPPTSELLGTSDRLFWEPMKVQDIRWNFEKFLVGPDGIPVMRWHHRTTISNV
KMDILSYMRR
//
>gi|511782570|gb|CM001964.1|:subseq(53481652,202772).[100000:102772].sp
TTCCAGATGGACTGCCATGGTGGCGTGAGCGGCACCATTTACGAGTACGGAGCCCTCACC
ATTGATGGGGAGGAGTACATCCCCTTCAAGCAGTACACTGGCAAATACGTCCTCTTTGTC
AACGTGGCCAGCTACTGAGGCCTGACGGGCCAGTACATTGAACTGAATGCACTACAAGAA
GAGCTTGCACCATTTGGTCTGGTCCTTCTCGGCTTTCCCTGCAACCAATTTGGAAAACAG
GAACCAGGCGAGAACTCAGAGATCCTTCCCAGCCTCAAGTATGTCCGACCAGGTGGAGGC
TTTGTCCCTAATTTCCAGCTCTTTGAGAAAGGGGATGTGAATGGAGAGAAAGAGCAGAAA
TTCTACACTTTCCTAAAGAACTCCTGTCCTCCCACCTCGGAGCTCCTGGGTACATCTGAC
CGCCTCTTCTGGGAACCCATGAAGGTCCAGGACATCCGCTGGAACTTTGAGAAGTTCCTG
GTGGGGCCAGATGGTATACCTGTCATGCGCTGGCACCACCGGACCACGATCAGCAATGTC
AAGATGGACATCCTGTCCTACATGAGGCGG
//
gi|511782570|gb|CM001964.1|:subseq(53481652,202772)	GeneWise	match	100000	102772	418.93	+	.	gi|511782570|gb|CM001964.1|:subseq(53481652,202772)-genewise-prediction-1
gi|511782570|gb|CM001964.1|:subseq(53481652,202772)	GeneWise	cds	100000	100159	0.00	+	0	gi|511782570|gb|CM001964.1|:subseq(53481652,202772)-genewise-prediction-1
gi|511782570|gb|CM001964.1|:subseq(53481652,202772)	GeneWise	intron	100160	101564	0.00	+	.	gi|511782570|gb|CM001964.1|:subseq(53481652,202772)-genewise-prediction-1
gi|511782570|gb|CM001964.1|:subseq(53481652,202772)	GeneWise	cds	101565	101682	0.00	+	2	gi|511782570|gb|CM001964.1|:subseq(53481652,202772)-genewise-prediction-1
gi|511782570|gb|CM001964.1|:subseq(53481652,202772)	GeneWise	intron	101683	102102	0.00	+	.	gi|511782570|gb|CM001964.1|:subseq(53481652,202772)-genewise-prediction-1
gi|511782570|gb|CM001964.1|:subseq(53481652,202772)	GeneWise	cds	102103	102202	0.00	+	1	gi|511782570|gb|CM001964.1|:subseq(53481652,202772)-genewise-prediction-1
gi|511782570|gb|CM001964.1|:subseq(53481652,202772)	GeneWise	intron	102203	102580	0.00	+	.	gi|511782570|gb|CM001964.1|:subseq(53481652,202772)-genewise-prediction-1
gi|511782570|gb|CM001964.1|:subseq(53481652,202772)	GeneWise	cds	102581	102772	0.00	+	0	gi|511782570|gb|CM001964.1|:subseq(53481652,202772)-genewise-prediction-1
//