Output_id:  GPx.16.selenocysteine
----------  ---------------------
-Species        Chlorocebus sabaeus                          -Taxid 60711
-Target         /home/U73970/luke/Selenoprofiles/selenoprofiles_3_installation/genome_linked/genome.fa
-Chromosome (+) gi|511782570|gb|CM001964.1|
-Program        genewise
-Query name     gi|212549567|ref|NP_001131079.1| glutathione peroxidase 6 [Sus scrofa]
-Query range    28-217     length:221   coverage: 0.86
-Profile range  105-376    length:445   coverage: 0.61    sec_position: [192]
-ASI:           0.3881     (ignoring gaps: 0.4637)
-AWSIc:         0.7212     Z-score: 0.71
-AWSIw:         0.7304     Z-score: 0.858
-State          kept

------- alignment -------
Query   MKMDCYKGVTGTIYEYGALTLNGEEYIPFKQYAGKHVLFVNVATYUGLTAQYPE <---Intron---> LNALQEELKPFGVVVLGFPCNQFGKQEPAK
         /|||/ ||/||||||||||//|||||||||| ||/|||||||/||||| || | <   1405nt   > |||||||| |||/|/||||||||||||| /
Target  FQMDCHGGVSGTIYEYGALTIDGEEYIPFKQYTGKYVLFVNVASYUGLTGQYIE                LNALQEELAPFGLVLLGFPCNQFGKQEPGE
        tcagtcgggagaatgtggcaaggggtactactagatgctgaggattgcagctag                cagccggcgctgcgccgtctactgacgcgg
        tatagaggtggctaaagctctagaaatctaaacgaattttatcgaggtcgaat    gt     ag   atactaaatcctgttttgtcgaatgaaacga
        cggccttcgccctcgcacccttgggccccggctcaccctccgcccacggcgct                agtaaaagtaattgctcctcccataagaacg
                                                     *                                                      

Query   NSEILLGLK <---Intron---> YVRPGGGFVPNFQLFEKGDVNGEKEQKVFTFLK <---Intron---> NSCPPTSDLLGSSNQLFWEPMKVHDI
        |||||  || <   420nt    > ||||||||||||||||||||||||||| /|||| <   378nt    > |||||||/|||/|//|||||||| ||
Target  NSEILPSLK                YVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLK                NSCPPTSELLGTSDRLFWEPMKVQDI
        atgaccaca                tgccgggtgcatcctgagggaggagcattatca                attccatgccgatgccttgcaagcga
        acattcgta   gt     ag    atgcgggttcatattaagatagaaaaatactta   gt     ag    acgccccattgccagttgactataat
        cagctccc                gtcaatactcttcgctgagtgtagaggacctcag                ccttccggcgtatccccgacggcgcc
                                                                                                            

Query   RWNFEKFLVGPDGVPVMRWYHRASVSTVKSDIMEYLKQ---------
        |||||||||||||/|||||/|| //| || ||/ |///         
Target  RWNFEKFLVGPDGIPVMRWHHRTTISNVKMDILSYMRRQAALGVKRK
        ctatgatcggcggacgactcccaaaaagaagacttaaccggcggaaa
        ggataatttgcagtcttggaagcctgatatattcatggacctgtaga
        cgctggcgggattatcgcgccgcgcctcggccgccggggacggcggg
                                                       
------- positions -------
Exon 1    53581652     53581811
Exon 2    53583217     53583334
Exon 3    53583755     53583854
Exon 4    53584233     53584451

-------- features -------
None
--------- 3' seq --------
Total sequence length available downstream >= 6000
Sequence until first stop codon: 
TAA
 *