T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=99
*
 BAD AVG GOOD
*
JH128433.1        :  99
gi|116812916|re   :  99
cons              :  99

JH128433.1        ---------------------------------------------
gi|116812916|re   MSADLRKRKKDTTADNDAPQEAQAEEENKKEKPSSCRYRFLWKLL

cons                                                           


JH128433.1        ------------------------EEALKSLGNEGLFLFSSLDTD
gi|116812916|re   LGLLLIALLFGIKIHRDNELVRQQEAALRTLGAEGLFLFSSLDTD

cons                                      * **::** ************


JH128433.1        NDLFLSPEEFKPIAEKLMGLAPVPDFEEDEVPDPSGESLTVVAKF
gi|116812916|re   NDMHISPEEFKPISEKLTGISTTSDYEEEELLDPNGETLSVASRF

cons              **:.:********:*** *::...*:**:*: **.**:*:*.::*


JH128433.1        QPLLLETMTKSKDGFLGVSHHALDGLQSWRKPQTLTSVFFARQFK
gi|116812916|re   QPLLMETMTKSKDGFLGITHSALSGLRNWTTPVVPNNVFYAGQFK

cons              ****:************::* **.**:.* .* . ..**:* ***


JH128433.1        AFLPPKNKLEVGDPWWVVPSELNIFTGYLSNNRFYPALPKGKEVI
gi|116812916|re   AFLPPKNKLEVGNPWWIIPSELSIFTGYLPNNRIYPPPPKGKEVI

cons              ************:***::****.******.***:**. *******


JH128433.1        IHNLLSMFHPRPFVKTRFGPQGAVACIRAVSDFYYDIIFRIHSEF
gi|116812916|re   IHKLLSMFHPRPFIKTRFAPQGSVACIRAISDFYYDIVFRIHAEF

cons              **:**********:****.***:******:*******:****:**


JH128433.1        QLNEPPGFPFWFSPAQFTGHIVLSKDSSHVREFRLFVPNNRSLNV
gi|116812916|re   QLNEPPNFPFWFSPGQFTGNIVISKDAAHVRHFKLFVPNNRTLNV

cons              ******.*******.****:**:***::***.*:*******:***


JH128433.1        DMEWLYGTSENSNMEVDIGYLPQMELELVSPSVPTILYDEEGNVI
gi|116812916|re   DMEWLYGASESSNMEVDIGYLPQMEIESLGPSIPSTIYDENGNIM

cons              *******:**.**************:* :.**:*: :***:**::


JH128433.1        DSQDSSGEPIQFVFEEIKWQSEISWEEAARRLEITMYPFKKVPYL
gi|116812916|re   ESRNAEGEAIEFVFEDINWQSEMTFEEAARKLEVTMYPFKRVSYY

cons              :*:::.**.*:****:*:****:::*****:**:******:*.* 


JH128433.1        PFTEAFHRAKAENKLVHSILLWGALDDQSC-GSGRTLRETVLESS
gi|116812916|re   PFPEAFDRALAEKKLVHSVLLWGALDDQSCXGSGRTLRETVLESL

cons              **.***.** **:*****:*********** ************* 


JH128433.1        PVLALLSENFISSWSLVKELEILQNNEENELLAKQASLHLEKYNF
gi|116812916|re   PVLALLNESFISTWSLVKELEELQSNKDS--YATFASLHLEKYNF

cons              ******.*.***:******** **.*::.   *. **********


JH128433.1        PVEMMLCFPNGTVVHHMNANYFLDITSMKPEEMEGGIFSFSAGFE
gi|116812916|re   PVEMMICLPNGTVVHHINANYFLDITSLKPDEVETNLFSFSDGVE

cons              *****:*:********:**********:**:*:* .:**** *.*


JH128433.1        DPSTAMYLKFLKEGLEKAKMFLQPV
gi|116812916|re   DLSTVTYIKFLKEGLEKAKPFLH-S

cons              * **. *:*********** **: