T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=94
*
 BAD AVG GOOD
*
JH126754.1        :  94
gi|35903099|ref   :  94
cons              :  94

JH126754.1        FIFPLL-PNSGG-GYEPRYRDLAQAVQAKYPDAEVIGVVGRTGSF
gi|35903099|ref   MGVQIKVEYCGGXGYEPRYQELKRVVTAEFTDADVSGFVGRQGSF

cons              : . :    .** ******::* :.* *::.**:* *.*** ***


JH126754.1        EVEINGQPVFSKLETGGFPYSEDICEAVVKASKGEAIQKITRSRP
gi|35903099|ref   EIEINGQLIFSKLETSGFPYEDDIMGVIQRAYDGQPVEKITKSQP

cons              *:***** :******.****.:**  .: :* .*:.::***:*:*


JH126754.1        PCVIL
gi|35903099|ref   PCVIL

cons              *****