SelO

1. Fastatranslate:

>JH126763.1 dna:scaffold scaffold:LatCha1:JH126763.1:1:1995336:1 REF:[translate(1)]

KGNLSASSAMGTASSGRGFLQTLRFDNLALRRLPVDPSDVNVPRQVPGACFSRVRPAPVEKPRLVVLSGD ALALLDLDGDELERWEEETAEYFSGNRLLPGCQPAAHCYCGHQFGNFAGQLGDGAAMYLGEVLNSKGERW EMQLKGTGPTPYSRQADGRKVLRSSTREFLCSEAIFHLGIPTTRAGTCVTSDSQVLRDIFYDGNPKHEKC TIVLRIAPTFIRFGSFEIFKPMDEFTGRQGPSVNRNDIRVEMLDYVIGTFYPEIQQSYPDNKVERNAAFF REITRRTARLVAEWQCVGFCHGVLNTDNMSIIGLTIDYGPFGFLDRYDADHICNASDSAGHYAYRKQPEI CKWNLKKLAEALVPELPLEVSQPVLDEEYDAEFEKHYLMKMRNKLGLVQEQEEDSKLVSELLETMQSTGM DFTNCFRLLSSFPIPGVSSSFKMEDYIEKIIEQCGSLEELKVLCKPQMDPRQLSMILMLAQSNPQLFDLI GSKAAVTKELDRIERYSKLQQLTDADLLSRNKKQWTEWLQKYSSRLEEEKEGTTDIDELNVQRVKLMNSN NPKFVLRNYIAQNAIEAAENGDFSEVRRVLKLLENPYSEEALSNLDVNEEPVAEAAVAACAASCLQTTPQ MPYNSKPPFWASELRVTUSS

2. SECISearch: 1 hit

Pattern: Loose

1 JH126763.1:subseq(1773392 15000) dna:scaffold scaffold:LatCha1:JH126763.1:1:1995336:1 REF: 7745 7639 (SECIS on complementary strand) upstemen: -5.27 fullstructen: -15.37

AAACGCAGUG GACAGAU GUGUACC CUGAG UGUGUGAAUGU AA ACAAAUGUCUUGUCUGGAUGGAC GGGGUUGCUA AGGAG CUUGAAGAAA AGGCGUU UAAGGCCAUG

COVE score: 0 (Recommended threshold for COVE: 15)