SelR

1. Fastatranslate:

>JH127454.1 dna:scaffold scaffold:LatCha1:JH127454.1:1:880396:1 REF:[translate(1)]

MSFCSFFGGEVYADHFEPGIYVCSKCGYELFSSRSKYQHSSPWPAFTETIHKDSVLKKAEQSHHAYKISC GKCRNGLGHEFLNDGPSMGQSRFUVFSSSLKFVPKGGE

2. SECISearch: 1 hit

Pattern: Loose (canonical and non-canonical)

JH126695.1:subseq(1771513 15000) dna:scaffold scaffold:LatCha1:JH126695.1:1:2347075:1 REF: 10265 10168 (SECIS on complementary strand)

upstemen: -4.60 fullstructen: -14.78

AUUGGCUCUC UAUCAGG UGUUAACGAGCUG CUGAA UGAGGAUAAAC AA GUGCACAAAACGCA GGUGCUUCAUG GGAU ACCCAAAA CCAGGG AUUUUUAAAU

COVE score: 0 (Recommended threshold for COVE: 15)