T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=99
*
 BAD AVG GOOD
*
JH208030.1_subs   :  99
gi|144953871|re   :  99
cons              :  99

JH208030.1_subs   -------------------------ICVYGAHLSSEACRELGFSS
gi|144953871|re   MAARRDGWLGPAFGLRLLLATVLQTVSALGAEFSSESCRELGFSS

cons                                       :.. **.:***:********


JH208030.1_subs   NLLCSSCNLLGQFSLNQLDPFCRECCQEEAQFETRKLYAGAILEV
gi|144953871|re   NLLCSSCDLLGQFNLLQLDPDCRGCCQEEAQFETKKLYAGAILEV

cons              *******:*****.* **** ** **********:**********


JH208030.1_subs   CGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDSG
gi|144953871|re   CGUKLGRFPQVQAFVRSDKPKLFKGLQIKYVRGSDPVLKLLDDSG

cons              ***********************:*********************


JH208030.1_subs   NIAEELSILKWNTDSVEEFLSEKLERI
gi|144953871|re   NIAEELSILKWNTDSVEEFLSEKLERI

cons              ***************************