T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=100
*
 BAD AVG GOOD
*
JH205199.1_subs   : 100
gi|172046601|sp   : 100
cons              : 100

JH205199.1_subs   MAHVAKSFYDLSATDLHGEKVDFNNFRGRVVLIENVASLUGTTVR
gi|172046601|sp   MAYIAKSFYDLSAIGLDGEKIDFNTFRGRAVLIENVASLUGTTTR

cons              **::********* .*.***:***.****.*************.*


JH205199.1_subs   DYTQLNQLQARYPRRLVVLGFPCNQFGYQEPGQGASLLGPASDVR
gi|172046601|sp   DYNQLNELQCRFPRRLVVLGFPCNQFGHQENCQNEEILNSLKYVR

cons              **.***:**.*:***************:**  *. .:*.. . **


JH205199.1_subs   PGGGFEPNFTLLQKCQVNGQDVHPVFAYLKAHLPAPADEPAALMA
gi|172046601|sp   PGGGYQPTFSLTQKCDVNGQNEHPVFAYLKDKLPYPYDDPFSLMT

cons              ****::*.*:* ***:****: ******** :** * *:* :**:


JH205199.1_subs   DPKFLVWSPVRRDDLSWNFEKFLVGPEGEPFKRYSPRFQTSAIEP
gi|172046601|sp   DPKLIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRSFQTINIEP

cons              ***:::******.*:********:*******:***  ***  ***


JH205199.1_subs   DIPRLLKLAK
gi|172046601|sp   DIKRLLKVAI

cons              ** ****:*