T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=98
*
 BAD AVG GOOD
*
gi|117167838|gb   :  98
JH212624.1_subs   :  98
cons              :  98

gi|117167838|gb   MKTAAARGATRRDGQPKLGLCVLCGLPAAGKSTFARALALRLRR-
JH212624.1_subs   -------------GIRRLGVCVLCGLPAAGKSTLARALRDRLQRR

cons                           *  :**:*************:****  **:* 


gi|117167838|gb   -ERGWAVGVLSYDDVLPLALPDCDGTQPRPSQWKMFRQELLKHLE
JH212624.1_subs   EDPGWDCALLTYDDLMPLEAFNQPETEAELSRWKLYRHELLVYLE

cons               : **  .:*:***::**   :   *:.. *:**::*:*** :**


gi|117167838|gb   CFLVAVISGAQMSAPPNRTEAVWEDFITCLKSQDLMIFPTALEAQ
JH212624.1_subs   HFLQALINGDHLYAPLNRTEATWKRFVSCFKEQGL-ISSEIHDAK

cons               ** *:*.* :: ** *****.*: *::*:*.*.* * .   :*:


gi|117167838|gb   PCHLLAKPAVSRPLFLVLDDNFYYQSMRYEVYQLARKYSLGFCQL
JH212624.1_subs   SCHYLINATASRPLYLVLDDNFYYQSMRYEVYQLARKYSLSFCQL

cons              .** * :.:.****:*************************.****


gi|117167838|gb   FLDCPLETCLKRNGERSQPLPDETIQLMGRKIEKPNPEKNAWEHN
JH212624.1_subs   FLDCPLESCLQRNCLRSQPLPDETICLMARKIEVPNPEKNTWEQN

cons              *******:**:**  ********** **.**** ******:**:*


gi|117167838|gb   SLIIQSSACSLEASLEVTGLLLTALENPIKCVEDNTEQKETDRII
JH212624.1_subs   SLILKSVECTSEDNLQVINLLATALENPEKQAEDNTEQKETDRAI

cons              ***::*  *: * .*:* .** ****** * .*********** *


gi|117167838|gb   CSTNILHKADETLRRTVSQTMREAKDE
JH212624.1_subs   CAASILHQADQAFRRIVSQIMKDVKEE

cons              *::.***:**:::** *** *::.*:*