T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=99
*
 BAD AVG GOOD
*
gi|170671712|re   :  99
JH208026.1_subs   :  99
cons              :  99

gi|170671712|re   MPPPGQTQLPDWDGLKLRVRTLIATHRVMIFSKSYCPYCHRVKEL
JH208026.1_subs   -------------------------------------FLHKVKEL

cons                                                   : *:****


gi|170671712|re   FSSLGVQYYALELDVTDDGPSIQQVLAELTNQRTVPNVFINGKHI
JH208026.1_subs   FHSMGIDYYALELDLTDDGSNIQQVLADITGQRTVPNVFVNGTHV

cons              * *:*::*******:****..******::*.********:**.*:


gi|170671712|re   GGCDATYKAYENGTLQRILGDVKD-AETYDYDLIVIGGGSGGLAC
JH208026.1_subs   GGYDTTFQAYQSGSLQNVLGNQADGAEVYDYDLIVVGGGSGGLAC

cons              ** *:*::**:.*:**.:**:  * **.*******:*********


gi|170671712|re   SKEAATLGKKVMVLDYVVPTPLGTSWGLGGTCVNVGCIPKKLMHQ
JH208026.1_subs   SKEAAALGKKVLVLDYVVPTPSGTSWGLGGTCVNVGCIPKKLMHQ

cons              *****:*****:********* ***********************


gi|170671712|re   AALLGQALKDSRAYGWQYDEQVKHNWEIMVEAVQNYIGSLNWGYR
JH208026.1_subs   AALLGQALQDSRKFGWEYDEQVKHNWETMVEAVQNYIGSLNWGYR

cons              ********:*** :**:********** *****************


gi|170671712|re   LSLREKSVTYQNSYGEFVEPHKIKATNRKGQVTYHTAETFVLATG
JH208026.1_subs   VSLREKTVTYINAYAEFIDPHKIKATNRKGQETFHTAQTFVLATG

cons              :*****:*** *:*.**::************ *:***:*******


gi|170671712|re   ERPRYLGIPGDKEYCITSDDLFSLPYCPGKTLVVGASYVALECAG
JH208026.1_subs   ERPRYLGIPGDKEYCITSDDLFSLPYCPGKTLIVGASYVALECAG

cons              ********************************:************


gi|170671712|re   FLAGLGLDVTVMVRSILLRGFDQEMAEKIGAHMETHGVTFIRKFV
JH208026.1_subs   FLAGIGLDVTIMVRSILLRGFDQEMAERSGAYMESHGVKFIRKFV

cons              ****:*****:****************: **:**:***.******


gi|170671712|re   PTQVERLEDGTPGRLKVTAKSTEGPEFFEGEYNTVLIAIGRDACT
JH208026.1_subs   PIQIERLEEGMPGRLKVVAQSTEGTEIVEGEYNTILIAIGRDACT

cons              * *:****:* ******.*:****.*:.******:**********


gi|170671712|re   RNIGLQTIGVKINEKNGKVPVNDEERTNVPYVYAIGDILDGKLEL
JH208026.1_subs   RNIGLDKIGVKINEKNGKIPVNDEEQTNVPHIYAIGDILDGKLEL

cons              *****:.***********:******:****::*************


gi|170671712|re   TPVAIQAGKLLARRLYGGSSTKCDYINVPTTVFTPLEYGSCGLAE
JH208026.1_subs   TPVAIQAGKLLARRLFGGSFIKCDYVNVPTTVFTPLEYGCCGLPE

cons              ***************:***  ****:*************.***.*


gi|170671712|re   EKAIEEYGKQNLEVYHSLFWPLEWTVPGRDNNTCYAKIICNKLDG
JH208026.1_subs   ERAIEEYGKDNLEVYHTLFWPLEWTVPSRDNNTCFAKIICNKHDG

cons              *:*******:******:**********.******:******* **


gi|170671712|re   NRVVGFHVLGPNAGEVTQGFAAAIKCGLTKELLDETIGIHPTCAE
JH208026.1_subs   DRVIGFHVLGPNAGEITQGFGAAMKCGLTKELLDETIGIHPTCAE

cons              :**:***********:****.**:*********************


gi|170671712|re   VFTTMDITKSSGQDITQRGCUG
JH208026.1_subs   VFTTMEITKSSGKEITQTGCUG

cons              *****:******::*** ****