#! /usr/bin/perl my @row; my $fam; my $id; my $ini; my $fin; my $chr; my $sense; my $sense2; while () { chomp($_); @row = split(/\t/,$_); $fam = substr ($row[0],0,-1); $id = substr ($row[1],0,-1); $chr = substr ($row[2],0,-1); $ini = substr ($row[3],1); $ini2 = substr ($ini,0,-1); $fin = substr ($row[4],1); $sense = substr ($row[5],2); if ($sense eq "-trev") {$sense2 = "(-)";} else {$sense2 = "(+)";} print "$fam \t $id \t $chr$sense2:$ini2...$fin \n"; }