genewise output Score 21.45 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000036_1.0 115 SPPQSPGPGKAGDAPNRRSGHVRGARVLSPPGRRARLSSPGPSRSSEAR SPP+ P PG A R PP R R PG + S+ R SPPRPPPPGTPARAAALSGQRRRRGAAPPPPSRPGRRPLPGTAARSDRR GL841599.1:sub255102 acccccccgacgagggctgccaccgggcccctccgcacccgaggcagca gccgccccgcccgccctcgagggggcccccccgcgggctcgcccggagg tcgtgcttgggagcgggcggggacaaagcatgggggggcggctcgccaa // >GL841599.1:subseq(716049,300000).pep SPPRPPPPGTPARAAALSGQRRRRGAAPPPPSRPGRRPLPGTAARSDRR // >GL841599.1:subseq(716049,300000).[255102:255248].sp AGTCCCCCGCGTCCGCCCCCTCCTGGGACGCCGGCAAGGGCCGCGGCGCTGTCCGGGCAG CGGAGGCGACGCGGAGCAGCACCGCCCCCACCTTCGCGGCCGGGGCGGAGGCCGCTCCCG GGGACCGCTGCCCGGAGCGACCGAAGA // GL841599.1:subseq(716049,300000) GeneWise match 255102 255248 21.45 + . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 255102 255248 0.00 + 0 GL841599.1:subseq(716049,300000)-genewise-prediction-1 // genewise output Score 922.42 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000036_1.0 161 EAREELRRHLVGLIERSRVVIFSKSYCPHSTR E RE+LRR L LIE +RV+IFSKSYCP+ST+ EPREDLRRRLWRLIETNRVMIFSKSYCPYSTK GL841599.1:su-255033 gccggccccctccagaacgaataaattctaaa acgaatgggtggttacagttttgagagcagca ggcacggagggccagcccggcccacccccccg SPP00000036_1.0 193 VKELFSSLGVECNVLELDQV VKELF++LGVEC +LELD V VKELFTTLGVECKILELDLV GL841599.1:su-254937 GTGACAG Intron 1 TAGgagctaatgggtaatgcgcg <0-----[254937:25086-0>taattcctgtagattatatt aaactttgaaatacgattat SPP00000036_1.0 213 DGARVQEVLSEITNQKTVPNIFV DG RVQ++L EIT+QKTVPNIFV D:D[gat] DGPRVQDLLLEITSQKTVPNIFV GL841599.1:su-250806 GGTAAGTA Intron 2 TAGATggcagcgcttgaaacaagcaatg <1-----[250805:24999-1> agcgtaatttatcgaactcattt tacgtacgaggattggaattatg SPP00000036_1.0 237 NKVHVGGCDQTFQ AYQSGLLQKLLQE NK+H+GGCD+T+Q A+QSGLLQ+LLQ+ NKIHMGGCDKTLQ AHQSGLLQRLLQD GL841599.1:su-249925 aaacaggtgaaccGTAGGGT Intron 3 TAGgccagtccacccg aatatgggaacta<0-----[249886:24627-0>caaggttagttaa taccgtatcatgg tcgttaagatagt SPP00000036_1.0 263 DLA-YDYDLIIIGGGSGGLSCAK EAA + A Y+YDLI+IGGGSGGL+C+K EAA ESATYEYDLIVIGGGSGGLACSK EAA GL841599.1:su-246233 gtgatgtgcagagggtggcgttaGTAAGAG Intron 4 TAGggg acccaaaattttgggcggtcgca<0-----[246164:24591-0>acc gagttattttattttttaggctg aaa SPP00000036_1.0 288 ILGKKVMVLDFVVPSPQGTSW LG +LGKKVMVLDFV PSP GT+W LG VLGKKVMVLDFVKPSPLGTTW G:G[ggt] LG GL841599.1:su-245909 gtgaagagcgtgactctgaatGGTAAGCT Intron 5 TAGGTcg ttgaattttattaccctgccg <1-----[245845:24068-1> tg tggggtgaatttgattgcaag tt SPP00000036_1.0 312 GTCVNVGCIPKKLMHQAALLGQALCDSRKFGWEYNQQ GTCVNVGCIPKKLMHQAALLGQAL DSR FGWEY + GTCVNVGCIPKKLMHQAALLGQALQDSRNFGWEYEEH GL841599.1:su-240680 gatgaggtacaataccggctgcgtcgtaatgtgtggc gcgtatggtcaattaaccttgactaacgatggaaaaa cttattctttagggtatctggacaaccgctcggtgat SPP00000036_1.0 349 RHNWETMTKAIQNHISSLNWGYR +HNWETM +AIQNHI SLNWGYR V:V[gtt] KHNWETMKEAIQNHIGSLNWGYR GL841599.1:su-240569 GGTAGGTA Intron 6 TAGTTacatgaaaggacacagttatgta <1-----[240568:23784-1> aaagactaactaaatgctaggag gccggcgaaatgccactatgttg SPP00000036_1.0 373 LSLREKAVAYVNSYGEFVEHHKIK AT +SLRE+AV Y N+Y EFVE HKIK AT VSLRERAVTYSNAYAEFVEDHKIK AT GL841599.1:su-237775 gttagaggattagtggtgggcaaaGTACAGT Intron 7 CAGga tctgagctcacacacattaaaata<0-----[237703:23666-0>cc gtgagataacctcttattactaag ac SPP00000036_1.0 399 NKKGQETYYTAAQFVIATGERPRYLGIQGDKEYCIT NKKG+ET++TA +FVIATGERPRYLGI GDKEYCIT NKKGEETFHTAGKFVIATGERPRYLGIPGDKEYCIT GL841599.1:su-236654 aaagggatcaggatgagaggaccttgacggagttaa aaagaactaccgatttccgagcgatgtcgaaaagtc cgaagactttaggtcaaataacgtaacgataattct SPP00000036_1.0 435 DDLFSLPYCPGKTLVVGASYVAL DDLFSLPYCPG TLVVGASYVAL S:S[agt] DDLFSLPYCPGNTLVVGASYVAL GL841599.1:su-236546 AGGTAAGGA Intron 8 TAGTggcttccttcgaatggggttggc <2-----[236544:23641-2> aattctcagcgactttgccatct ttttcgttctattatggtttttg SPP00000036_1.0 459 ECAGFLAGFGLDVTVMVRSILLRGFDQEMAEKVGSYMEQHGVKFLRKFI ECAGFLAG+GL VTVMVRSILLRGFDQE+AEK+G+YME +GVKFLRK+I ECAGFLAGIGLKVTVMVRSILLRGFDQEIAEKIGAYMEMNGVKFLRKYI GL841599.1:su-236342 gtggtcggagcagagagctacccgtgcgaggaaggtagaaggatcaata agcgttcgtgtatctttgctttggtaaatcaatgcatatagtattgaat gtaacttttgaacatgagcctttcttgaaggaatttgagtgggccgaca SPP00000036_1.0 508 PVM VQQLEKGSPGKLKVLAKSTEGTE PV +QQLE+G+PGKLKV AKSTEG+E PVK IQQLEEGTPGKLKVEAKSTEGSE GL841599.1:su-236195 cgaGTGAGTT Intron 9 TAGacctgggacgacagggataggtg cta<0-----[236186:23589-0>taataagccgatatacaccagca tgg tggaaacataagagacataagaa SPP00000036_1.0 534 TIEGVYNT VLLAIGRDSCTRKIGLEK TIE YNT VLLAIGRDSCTRKIGLEK TIEEEYNT VLLAIGRDSCTRKIGLEK GL841599.1:su-235825 aagggtaaGTAAGTT Intron 10 TAGgttgagcgttaaaagtga ctaaaaac<0-----[235801:23396-0>tttctggacgcgatgtaa tcaaatca tgacttacctagatcggg SPP00000036_1.0 560 IGVKINE SGKIPVNDVEQTNVPY IGVKINE +GKIPVND EQTNVPY IGVKINE K:K[aag] TGKIPVNDEEQTNVPY GL841599.1:su-233905 aggaaagAAGTAAGTG Intron 11 TAGGagaacgagggcaagct tgtataa <2-----[233882:23299-2> cgatctaaaaacatca ttcactg taaaaattaaaccgct SPP00000036_1.0 584 VYAVGDILEDKPELTPVAIQSGKLLAQRLFGASLEK VYA+GD+LEDK ELTPVAIQ+GKLLA+RLFG LEK VYAIGDVLEDKLELTPVAIQAGKLLARRLFGGRLEK GL841599.1:su-232941 gtgagggtggacgcacggacggactgcactggctga tactgattaaatatcctctacgattcggttgggtaa ttttgtaagtgagcctttagaagggaaattgcaaag SPP00000036_1.0 620 CDYINVPTTVFTPLEYGCCGLSEEKA CDYINVPTTVFTPLEYGCCGLSEEKA CDYINVPTTVFTPLEYGCCGLSEEKA GL841599.1:su-232833 GTGATTG Intron 12 TAGtgtaagcaagtactgtgttgttggag <0-----[232833:23205-0>gaatatcccttcctaaggggtcaaac ttcttgatagtttgattctagtagac SPP00000036_1.0 646 IEVYKKENLE IYHTLFWPLEWTVAGR +E+YKK+N+E +YHT FWP+EWT+AGR VELYKKDNVE VYHTFFWPVEWTIAGR GL841599.1:su-231972 ggttaagaggGTATGGC Intron 13 TAGgtcatttcggtaagga tataaaaata<0-----[231942:22846-0>taacttgctagctcgg gaataattag attctcgttagaacca SPP00000036_1.0 672 ENNTCYAKIICNKFDHDRVI FHI ENN C+ KIICNK D+ + FH+ ENNACFGKIICNKHDNVCIG G:R[aga] FHV GL841599.1:su-228412 gaagttgaaataacgagtagAGTGGAAA Intron 14 TAGGAtcg aaacgtgattgaaaaatgtg <1-----[228351:22448-1> tat acttttagatctatccatta ttt SPP00000036_1.0 696 LGPNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGE LGPNAGE+TQGFAAAMKCGLTKQLLDDTIGIHPTCGE LGPNAGEITQGFAAAMKCGLTKQLLDDTIGIHPTCGE GL841599.1:su-224472 cgcagggaacgtgggaatgcaactcggaagaccatgg tgcacgatcagtccctaggtcaattaactgtaccgga tcctttgtcgctatagatcccgggtttttccttcttg SPP00000036_1.0 733 VFTTLEITKSSGLDITQKGC +FTT+EITKSSGL I+QKGC IFTTMEITKSSGLSISQKGC GL841599.1:su-224361 GTAAGAA Intron 15 CAGataaagaaattgcaatcagt <0-----[224361:22415-0>ttcctatcaccgtgtcaagg ccatgatagaatgtctgatc // Making a D in phase 1 intron Making a G in phase 1 intron Making a V in phase 1 intron Making a S in phase 2 intron Making a K in phase 2 intron Making a R in phase 1 intron >GL841599.1:subseq(716049,300000).pep EPREDLRRRLWRLIETNRVMIFSKSYCPYSTKVKELFTTLGVECKILELDLVDDGPRVQD LLLEITSQKTVPNIFVNKIHMGGCDKTLQAHQSGLLQRLLQDESATYEYDLIVIGGGSGG LACSKEAAVLGKKVMVLDFVKPSPLGTTWGLGGTCVNVGCIPKKLMHQAALLGQALQDSR NFGWEYEEHVKHNWETMKEAIQNHIGSLNWGYRVSLRERAVTYSNAYAEFVEDHKIKATN KKGEETFHTAGKFVIATGERPRYLGIPGDKEYCITSDDLFSLPYCPGNTLVVGASYVALE CAGFLAGIGLKVTVMVRSILLRGFDQEIAEKIGAYMEMNGVKFLRKYIPVKIQQLEEGTP GKLKVEAKSTEGSETIEEEYNTVLLAIGRDSCTRKIGLEKIGVKINEKTGKIPVNDEEQT NVPYVYAIGDVLEDKLELTPVAIQAGKLLARRLFGGRLEKCDYINVPTTVFTPLEYGCCG LSEEKAVELYKKDNVEVYHTFFWPVEWTIAGRENNACFGKIICNKHDNVCIGRFHVLGPN AGEITQGFAAAMKCGLTKQLLDDTIGIHPTCGEIFTTMEITKSSGLSISQKGC // >GL841599.1:subseq(716049,300000).[255033:224095].sp GAGCCGCGCGAAGACCTGCGGCGACGGCTGTGGCGCCTCATAGAGACCAACCGCGTGATG ATCTTCAGCAAAAGCTACTGCCCCTACAGCACCAAGGTAAAAGAACTCTTTACTACTTTG GGAGTAGAATGTAAAATCTTGGAACTTGATCTAGTTGATGATGGACCCAGGGTTCAAGAC CTGTTATTGGAGATAACTAGTCAGAAGACAGTACCTAATATATTTGTGAATAAAATCCAC ATGGGTGGATGTGACAAAACTCTGCAGGCTCACCAGAGTGGTTTACTACAGAGACTTCTA CAGGATGAGTCAGCGACTTATGAATATGATCTTATTGTAATTGGTGGTGGTTCTGGTGGA CTGGCGTGCTCTAAGGAAGCAGCAGTTTTGGGGAAGAAGGTTATGGTACTAGATTTTGTT AAGCCATCTCCTTTGGGCACAACATGGGGTCTTGGTGGCACTTGTGTAAATGTTGGCTGT ATTCCTAAAAAGTTGATGCATCAAGCTGCCCTTTTGGGGCAAGCCTTACAAGACTCCAGG AACTTTGGCTGGGAGTATGAGGAACATGTTAAGCACAACTGGGAGACCATGAAAGAAGCA ATTCAGAACCACATAGGCTCTTTAAATTGGGGTTATAGGGTGTCTTTGAGAGAGAGAGCT GTAACATACTCCAATGCCTATGCTGAATTTGTTGAAGACCATAAAATAAAGGCAACCAAC AAGAAAGGAGAGGAAACCTTTCATACTGCAGGGAAGTTTGTCATAGCAACAGGTGAAAGA CCCCGGTATTTAGGAATCCCGGGAGATAAAGAATATTGTATCACTAGTGATGATCTTTTT TCCCTGCCTTATTGCCCTGGAAATACTTTAGTTGTGGGGGCTTCTTATGTTGCTCTGGAG TGTGCAGGATTCCTTGCTGGTATTGGGCTAAAAGTCACAGTTATGGTACGGTCCATCCTT CTTCGTGGCTTTGATCAGGAAATAGCGGAGAAAATAGGTGCTTATATGGAAATGAATGGG GTGAAGTTCCTCAGGAAATACATACCTGTGAAGATTCAGCAGTTAGAAGAAGGCACACCT GGAAAACTGAAAGTGGAAGCCAAATCTACAGAAGGGTCAGAAACTATCGAAGAAGAATAT AACACAGTTTTGTTAGCCATTGGTCGAGACTCCTGTACAAGGAAAATTGGCTTGGAGAAG ATTGGTGTCAAAATCAATGAGAAGACTGGAAAAATACCAGTAAATGATGAAGAACAAACC AACGTGCCCTATGTTTATGCTATTGGGGATGTATTAGAGGATAAGCTAGAGCTCACCCCT GTTGCTATACAGGCAGGAAAGCTGTTGGCACGAAGACTTTTTGGGGGCCGATTAGAAAAG TGTGATTACATTAATGTGCCAACTACAGTGTTTACTCCTTTGGAATATGGTTGCTGTGGA TTGTCTGAAGAGAAAGCCGTGGAATTATATAAAAAAGATAATGTAGAGGTATATCATACC TTTTTCTGGCCTGTTGAATGGACAATAGCCGGCAGAGAAAACAATGCTTGTTTTGGAAAG ATAATTTGCAATAAACATGACAACGTATGTATTGGAAGATTTCATGTTCTTGGCCCCAAT GCTGGTGAGATTACCCAGGGCTTTGCAGCTGCAATGAAATGTGGCCTCACCAAGCAGTTG CTTGATGATACTATTGGCATCCATCCTACCTGTGGTGAGATCTTCACAACTATGGAAATT ACAAAGTCATCAGGTCTGAGTATCTCTCAGAAAGGTTGC // GL841599.1:subseq(716049,300000) GeneWise match 255033 224097 922.42 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 255033 254938 0.00 - 0 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 254937 250867 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 250866 250806 0.00 - 0 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 250805 249997 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 249996 249887 0.00 - 2 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 249886 246273 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 246272 246165 0.00 - 0 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 246164 245919 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 245918 245846 0.00 - 0 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 245845 240689 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 240688 240569 0.00 - 2 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 240568 237847 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 237846 237704 0.00 - 2 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 237703 236661 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 236660 236545 0.00 - 0 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 236544 236413 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 236412 236187 0.00 - 1 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 236186 235895 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 235894 235802 0.00 - 0 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 235801 233960 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 233959 233883 0.00 - 0 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 233882 232991 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 232990 232834 0.00 - 1 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 232833 232051 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 232050 231943 0.00 - 0 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 231942 228461 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 228460 228352 0.00 - 0 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 228351 224484 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 224483 224362 0.00 - 2 GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise intron 224361 224157 0.00 - . GL841599.1:subseq(716049,300000)-genewise-prediction-1 GL841599.1:subseq(716049,300000) GeneWise cds 224156 224097 0.00 - 0 GL841599.1:subseq(716049,300000)-genewise-prediction-1 //