genewise output Score 913.43 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000034_1.0 1 MNGPEDLPKSYDYDLIIIGGGSGGLAAAK MNG + P+SYDYDLIIIGGGSGGLAAAK MNGSNETPESYDYDLIIIGGGSGGLAAAK GL861603.1:subs42774 aagtagacgttgtgcaaagggtggcgggaGTATGTG Intron 1 tagcaaccacaaaattttgggcggtccca<0-----[42861:45377] gtgatgccaccttcatccagttacgttcg SPP00000034_1.0 30 EAAQYGKKVMVLDFVTPTPLGTRW EAA+YGKK+MVLDFVTPTPLG RW EAARYGKKIMVLDFVTPTPLGNRW G:G[ggt] GL861603.1:subs45375 CAGgggctgaaaagcgtgacaccgaatGGTAAGTG Intron 2 -0>accgagaattttattcccctgagg <1-----[45451:50000] aacatcggcgggttttatttatag SPP00000034_1.0 54 LGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEET LGGTCVNVGCIPKKLMHQAALLGQALQDSR YGW++EE LGGTCVNVGCIPKKLMHQAALLGQALQDSRKYGWQIEEE GL861603.1:subs49998 AAGGTcggatgaggtacaacaccggctgcgtcgtcatgtcaggg -1> tggcgtatggtcaattaaccttgactaacgaaggataaa taaatgttctacgatgcggtgaggcgacccataggtaga SPP00000034_1.0 94 KHDWDRMIEAVQNHIGSLNWGYR KH+W+RM EAVQN+IGSLNWGYR V:V[gtc] KHNWERMTEAVQNYIGSLNWGYR GL861603.1:subs50120 GGTATGGA Intron 3 CAGTCacatgaaagggcatagtcatgtc <1-----[50121:58073]-1> aaagagtcactaaatgctaggag attgaagaagcgtccctgcgtca SPP00000034_1.0 118 VALREKKVVYENAYGQFIGPHRIK AT VALRE KV YENAYG+F+GPH+IK AT VALRENKVTYENAYGEFVGPHKIK AT GL861603.1:subs58145 ggtcgaagatgagtggtggccaaaGTAAAAA Intron 4 CAGga tctgaaatcaaacagattgcaata<0-----[58217:58380]-0>cc acaggcgcccgtttaatggccgtg ac SPP00000034_1.0 144 NNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCIS NNKGKEK+Y+AERFLIATGERPRY GIPGDKEYCIS NNKGKEKFYTAERFLIATGERPRYPGIPGDKEYCIS GL861603.1:subs58387 aaagagattaggatcagaggacctcgacggagttaa aaagaaataccagtttccgagcgacgtcgaaaagtg tcgcaagttggaacctcataaatcgccaacaatctc SPP00000034_1.0 180 DDLFSLPYCPGKTLVVGASYVAL DDLFSLPYCPGKTLVVGASYVAL S:S[agt] DDLFSLPYCPGKTLVVGASYVAL GL861603.1:subs58495 AGGTAGGGC Intron 5 CAGTggctttcttcgaacggggttggc <2-----[58497:60983]-2> aattctcagcgactttgccatct tctccatccgagaggtggccacg SPP00000034_1.0 204 ECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFV ECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIG+HME HGIKFIRQFV ECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGDHMEGHGIKFIRQFV GL861603.1:subs61054 gtggtcggagtggagagctaccagtgcgagaaaggcaggcgaataactg agcgttcgtgtatctttgctttggtaaatcaatgaatagagtattgatt attgtgacttgtctggtgttcgagccacgccatgccggatccaccggtg SPP00000034_1.0 253 PIK VEQIEAGTPGRLRVVAQSTNSEE PIK +EQIE G PGRLRVVAQST+ +E PIK IEQIEEGMPGRLRVVAQSTDGKE GL861603.1:subs61201 caaGTAAGTA Intron 6 TAGagcagggacgacagggctaggag cta<0-----[61210:64612]-0>taataagtcggtgttcaccagaa tta tagtaacgttacggctgcctcag SPP00000034_1.0 279 IIEGEYNT VMLAIGRDACTRKIGLET IEGEYNT V+LAIGRD+CTRKIGLE TIEGEYNT VLLAIGRDSCTRKIGLEV GL861603.1:subs64682 aagggtaaGTAAGTC Intron 7 CAGgccgagcgttaaaagtgg ctagaaac<0-----[64706:65355]-0>tttctggacgcgatgtat ctgaactg ggggaaatacgaatcgaa SPP00000034_1.0 305 VGVKINE TGKIPVTDEEQTNVPY VGVKINE TGKIPV DEEQTNVPY VGVKINE K:K[aag] TGKIPVNDEEQTNVPY GL861603.1:subs65410 gggaaagAAGTAAGAA Intron 8 TAGGagaacgagggcaagct tgtataa <2-----[65433:66275]-2> cgatctaaaaacatca tgggcta agaatcttgagctatc SPP00000034_1.0 329 IYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVK IYAIGDILEDK+ELTPVAIQAGRLLA+RLYAGS VK IYAIGDILEDKLELTPVAIQAGRLLARRLYAGSNVK GL861603.1:subs66325 atgaggatggacgcacggacggactgccctggtaga tactgattaaatatcctctacggttcggtacgcata ctctgtcaacagagaaaacgacagatgatttattag SPP00000034_1.0 365 CDYENVPTTVFTPLEYGACGLSEEKA CDY+NVPTTVFTP+EYG+CGLSEEKA CDYDNVPTTVFTPMEYGSCGLSEEKA GL861603.1:subs66433 GTAAGCA Intron 9 CAGtgtgagcaagtacagtgttgctggag <0-----[66433:68840]-0>gaaaatcccttcctaagcggtcaaac tctctccctatctgatgtttctagac SPP00000034_1.0 391 VEKFGEENIE VYHSYFWPLEWTIPSR +EKFGEENIE VYHSYFWPLEWTIPSR IEKFGEENIE VYHSYFWPLEWTIPSR GL861603.1:subs68919 agatgggaagGTAAGGG Intron 10 CAGgtcatttccgtaacta taatgaaata<0-----[68949:70238]-0>taagatgctagctccg cggtaaacag cctcctgagagccaaa SPP00000034_1.0 417 DNNKCYAKIICNTKDN ERVVGFHVLG DNNKCYAK+IC+ KDN ERVVGFHVLG DNNKCYAKVICHVKDN ERVVGFHVLG GL861603.1:subs70287 gaaattgagatcgagaGTAAGTA Intron 11 TAGgcgggtcgcg aaaagacattgataaa<0-----[70335:75015]-0>agttgtattg tctacccgccctcacc attgtcccgt SPP00000034_1.0 443 PNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAE PNAGEVTQGFAAALKCGLTK+QLDSTIGIHPVCAE PNAGEVTQGFAAALKCGLTKEQLDSTIGIHPVCAE GL861603.1:subs75046 caggggacgtgggcatgcaagccgaaagaccgtgg cacgatcagtccctaggtcaaatagctgtactgca atacagtgcttaccgtagcagggccataccagtag SPP00000034_1.0 478 VFTTLSVTKRSGASILQAGC VFTTLSVTKRSG SILQAGC VFTTLSVTKRSGGSILQAGC GL861603.1:subs75151 GTAGGTC Intron 12 CAGgtaactgaactggaaccggt <0-----[75151:79729]-0>ttcctctcagcgggttacgg gtgggtgtatagacccgatc // Making a G in phase 1 intron Making a V in phase 1 intron Making a S in phase 2 intron Making a K in phase 2 intron >GL861603.1:subseq(314969,179822).pep MNGSNETPESYDYDLIIIGGGSGGLAAAKEAARYGKKIMVLDFVTPTPLGNRWGLGGTCV NVGCIPKKLMHQAALLGQALQDSRKYGWQIEEEVKHNWERMTEAVQNYIGSLNWGYRVAL RENKVTYENAYGEFVGPHKIKATNNKGKEKFYTAERFLIATGERPRYPGIPGDKEYCISS DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGDHM EGHGIKFIRQFVPIKIEQIEEGMPGRLRVVAQSTDGKETIEGEYNTVLLAIGRDSCTRKI GLEVVGVKINEKTGKIPVNDEEQTNVPYIYAIGDILEDKLELTPVAIQAGRLLARRLYAG SNVKCDYDNVPTTVFTPMEYGSCGLSEEKAIEKFGEENIEVYHSYFWPLEWTIPSRDNNK CYAKVICHVKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKEQLDSTIGIHPVCAEVFT TLSVTKRSGGSILQAGC // >GL861603.1:subseq(314969,179822).[42774:79789].sp ATGAATGGGTCAAATGAGACCCCCGAATCCTACGATTATGACCTAATTATCATCGGAGGG GGTTCTGGAGGCCTGGCTGCTGCCAAGGAAGCAGCCCGATATGGCAAGAAGATCATGGTG CTGGATTTTGTTACTCCAACTCCTCTTGGAAATAGATGGGGTCTTGGAGGAACATGTGTG AATGTTGGCTGTATACCCAAGAAACTTATGCACCAGGCGGCTCTGTTAGGGCAGGCCTTG CAAGACTCCCGCAAATATGGATGGCAGATTGAAGAGGAAGTCAAACATAATTGGGAAAGA ATGACAGAAGCGGTCCAGAATTACATCGGCTCTCTGAACTGGGGTTACCGAGTAGCCTTA CGGGAGAACAAGGTCACCTACGAGAATGCTTATGGAGAATTTGTGGGGCCCCACAAGATT AAGGCAACCAATAACAAGGGCAAAGAAAAGTTTTATACGGCGGAAAGATTCCTCATTGCC ACAGGTGAAAGACCACGTTACCCGGGCATCCCAGGAGACAAAGAATATTGCATTAGCAGT GATGACCTTTTCTCCTTACCTTACTGCCCGGGAAAGACACTGGTGGTTGGGGCGTCCTAC GTAGCCCTGGAATGTGCTGGGTTTCTGGCAGGCATTGGTTTGGATGTCACTGTGATGGTT CGGTCTATTCTCCTGAGAGGGTTCGACCAAGACATGGCCAACAAAATTGGGGACCACATG GAGGGACATGGCATCAAATTCATCAGGCAGTTTGTGCCTATTAAAATTGAACAGATTGAA GAAGGCATGCCTGGTAGACTCAGGGTGGTCGCTCAGTCCACCGATGGCAAAGAGACCATT GAGGGAGAATACAATACGGTGCTGCTGGCGATAGGACGAGATTCATGCACGAGAAAAATT GGCTTGGAAGTAGTTGGGGTGAAGATCAATGAAAAGACAGGGAAAATACCTGTCAATGAT GAGGAACAGACCAATGTACCTTACATCTATGCCATTGGGGATATCTTAGAAGACAAACTG GAACTGACACCAGTAGCAATCCAGGCAGGCAGACTGTTAGCTCGGCGACTTTATGCTGGA TCTAATGTAAAGTGTGACTATGACAATGTCCCCACCACTGTATTTACCCCTATGGAATAT GGGTCTTGTGGTCTCTCTGAAGAGAAAGCCATCGAGAAGTTTGGAGAAGAAAACATAGAG GTCTACCATAGCTACTTTTGGCCACTGGAATGGACCATCCCATCAAGAGATAACAATAAA TGCTACGCCAAGGTCATCTGCCATGTCAAAGACAACGAACGTGTTGTGGGTTTCCACGTC CTGGGTCCAAATGCAGGCGAAGTGACTCAGGGCTTTGCTGCAGCCCTCAAGTGTGGACTG ACCAAAGAGCAGCTGGACAGCACAATTGGAATCCACCCAGTGTGTGCAGAGGTGTTTACG ACGCTGTCTGTGACTAAACGTTCAGGGGGAAGCATCCTCCAGGCAGGTTGC // GL861603.1:subseq(314969,179822) GeneWise match 42774 79789 913.43 + . GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise cds 42774 42860 0.00 + 0 GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise intron 42861 45377 0.00 + . GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise cds 45378 45450 0.00 + 0 GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise intron 45451 50000 0.00 + . GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise cds 50001 50120 0.00 + 2 GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise intron 50121 58073 0.00 + . GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise cds 58074 58216 0.00 + 2 GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise intron 58217 58380 0.00 + . GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise cds 58381 58496 0.00 + 0 GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise intron 58497 60983 0.00 + . GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise cds 60984 61209 0.00 + 1 GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise intron 61210 64612 0.00 + . GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise cds 64613 64705 0.00 + 0 GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise intron 64706 65355 0.00 + . GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise cds 65356 65432 0.00 + 0 GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise intron 65433 66275 0.00 + . GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise cds 66276 66432 0.00 + 1 GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise intron 66433 68840 0.00 + . GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise cds 68841 68948 0.00 + 0 GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise intron 68949 70238 0.00 + . GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise cds 70239 70334 0.00 + 0 GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise intron 70335 75015 0.00 + . GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise cds 75016 75150 0.00 + 0 GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise intron 75151 79729 0.00 + . GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise cds 79730 79789 0.00 + 0 GL861603.1:subseq(314969,179822)-genewise-prediction-1 // genewise output Score 20.74 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000034_1.0 177 CISSDDLFSLPYCPGKTLV C+ S DLFS +C GK V CVKSKDLFS--FCKGKNFV GL861603.1:su-162674 tgatagttt ttagaatg gtacaattc tgagaatt tagaacgtt ttgaatcg // >GL861603.1:subseq(314969,179822).pep CVKSKDLFSFCKGKNFV // >GL861603.1:subseq(314969,179822).[162674:162622].sp TGTGTAAAGTCAAAAGACTTGTTTTCTTTTTGTAAGGGAAAAAATTTCGTG // GL861603.1:subseq(314969,179822) GeneWise match 162674 162624 21.74 - . GL861603.1:subseq(314969,179822)-genewise-prediction-1 GL861603.1:subseq(314969,179822) GeneWise cds 162674 162624 0.00 - 0 GL861603.1:subseq(314969,179822)-genewise-prediction-1 //