genewise output Score 19.74 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000027_1.0 62 FVRHFLCYICKEYVEDLAKIPRSFLQEANVT F H+L Y+ K+ E K+P +F ++T FFFHILKYLIKQLKEFTLKFPNTFQSHFHIT GL841475.1:sub159994 tttcatattaactagtatatcaatctctcaa tttattaattaataatctatcactacatatc tttctagtaaaaaagcaaatatataattcac // >GL841475.1:subseq(468781,300000).pep FFFHILKYLIKQLKEFTLKFPNTFQSHFHIT // >GL841475.1:subseq(468781,300000).[159994:160086].sp TTTTTTTTTCACATTTTAAAGTATTTAATAAAACAATTAAAAGAGTTCACATTAAAATTT CCAAATACATTTCAATCACATTTTCACATAACC // GL841475.1:subseq(468781,300000) GeneWise match 159994 160086 19.74 + . GL841475.1:subseq(468781,300000)-genewise-prediction-1 GL841475.1:subseq(468781,300000) GeneWise cds 159994 160086 0.00 + 0 GL841475.1:subseq(468781,300000)-genewise-prediction-1 // genewise output Score 317.42 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000027_1.0 25 DSGQPLAAAVAELPVLDARGQRVPFGALFRERRAVVVFVR + G PLA VAELPVLDA G+ + FG LFRERRA+VVFVR ERGVPLAEDVAELPVLDASGKGILFGELFRERRAIVVFVR GL841475.1:su-257477 gcggctggggggccgcggtgagactggctcgccgaggtgc aggtctcaatcatcttaccgagtttgattgaggctttttg gccgcgcgcgcgcgggtctcagtgcggccggcgccagcgg SPP00000027_1.0 65 HFLCYICKEYVEDLAKIPRSFLQ HFLCY CKEYVEDLAKIP++FLQ HFLCYTCKEYVEDLAKIPKNFLQ GL841475.1:su-257357 GTGAGCC Intron 1 CAGcttttatagtgggtgaacaattc <0-----[257357:25664-0>attgacgaaataatcatcaatta tcgtcccaatgacgcatcgttaa SPP00000027_1.0 88 EANVTLIVIGQSSYHHIE +ANVTLIVIGQSS+ HIE DANVTLIVIGQSSFQHIE GL841475.1:su-256575 GTAAGTT Intron 2 AAGggagacagagctttccag <0-----[256575:25043-0>acatcttttgacctaata tttcaaattaaatcactg SPP00000027_1.0 106 PFCKLTGYSHEIYVDPEREIYKRLGM PFCKLTGYSHEIYVD ER+IY++LGM PFCKLTGYSHEIYVDTERKIYRKLGM GL841475.1:su-250378 GTATGTA Intron 3 TAGcttacagttcgatggagaaataacga <0-----[250378:25000-0>ctgatcgacaatatacagatagatgt tccggagtttacttctgaattaatag SPP00000027_1.0 132 KRGEEIASS QSPHIKSNLLSGSL K+GE I +S +SPH+KSNLLSGS+ KKGEGITTS G:V[gtg] RSPHVKSNLLSGSI GL841475.1:su-249922 aagggaaatGGTAAATA Intron 4 TAGTGcaccgatacctgaa aagagtccc <1-----[249894:24105-1> ggcatacattcggt gataattaa gcatgaccacaact SPP00000027_1.0 156 QSLWRAVTGPLFDFQGDPAQQGGTLILGP QSLWRAVTGP+FDFQGDPAQQGGTLILGP QSLWRAVTGPVFDFQGDPAQQGGTLILGP GL841475.1:su-241006 cactaggagcgtgtcggcgccggacatgc agtggctcgcttatagaccaaggctttgc acggacgtctttttaatatgataactatt SPP00000027_1.0 185 NNIHFIHRDRNRLDHKPINSVLQ NNIHFIH D+NRLDHKPINS+LQ G:G[ggt] NNIHFIHLDKNRLDHKPINSILQ GL841475.1:su-240919 GGTAAGTC Intron 5 CAGGTaaactaccgaaacgcacaatatc <1-----[240918:23758-1> aatattataaagtaaactactta cccttacttgtaatcagacttga SPP00000027_1.0 209 LVGVQHVNFTNRPSVIHV LVGVQ VNFTN+ +I V LVGVQEVNFTNKSLIIDV GL841475.1:su-237511 cgggcggataaatcaagg ttgtaatatcaactttat taataagttatatcttta // Making a V in phase 1 intron Making a G in phase 1 intron >GL841475.1:subseq(468781,300000).pep ERGVPLAEDVAELPVLDASGKGILFGELFRERRAIVVFVRHFLCYTCKEYVEDLAKIPKN FLQDANVTLIVIGQSSFQHIEPFCKLTGYSHEIYVDTERKIYRKLGMKKGEGITTSVRSP HVKSNLLSGSIQSLWRAVTGPVFDFQGDPAQQGGTLILGPGNNIHFIHLDKNRLDHKPIN SILQLVGVQEVNFTNKSLIIDV // >GL841475.1:subseq(468781,300000).[257477:237456].sp GAGCGCGGCGTGCCCTTGGCCGAGGACGTGGCCGAGCTCCCGGTGCTGGATGCCTCTGGC AAAGGGATTCTGTTCGGGGAGCTCTTCCGGGAGCGCCGGGCCATCGTAGTGTTCGTGCGG CATTTCTTGTGTTACACCTGCAAAGAATATGTGGAAGACTTGGCCAAAATTCCCAAGAAT TTTTTACAAGATGCTAATGTCACACTAATAGTTATTGGACAATCATCTTTCCAACACATT GAGCCTTTCTGCAAGCTGACAGGGTATTCTCATGAAATCTATGTTGACACTGAGAGAAAA ATTTATAGAAAACTTGGAATGAAGAAAGGTGAAGGAATTACTACATCAGTGCGGAGCCCA CATGTGAAATCCAACCTACTCTCAGGAAGCATTCAAAGCCTGTGGAGAGCCGTGACTGGC CCTGTTTTTGATTTTCAAGGAGATCCAGCTCAGCAAGGTGGAACACTCATTTTAGGTCCT GGTAACAACATCCATTTTATACACCTTGATAAGAATAGACTAGATCACAAACCGATAAAC TCTATTTTGCAACTTGTAGGAGTTCAAGAAGTGAATTTTACAAATAAATCTCTCATTATT GATGTA // GL841475.1:subseq(468781,300000) GeneWise match 257477 237458 317.42 - . GL841475.1:subseq(468781,300000)-genewise-prediction-1 GL841475.1:subseq(468781,300000) GeneWise cds 257477 257358 0.00 - 0 GL841475.1:subseq(468781,300000)-genewise-prediction-1 GL841475.1:subseq(468781,300000) GeneWise intron 257357 256645 0.00 - . GL841475.1:subseq(468781,300000)-genewise-prediction-1 GL841475.1:subseq(468781,300000) GeneWise cds 256644 256576 0.00 - 0 GL841475.1:subseq(468781,300000)-genewise-prediction-1 GL841475.1:subseq(468781,300000) GeneWise intron 256575 250433 0.00 - . GL841475.1:subseq(468781,300000)-genewise-prediction-1 GL841475.1:subseq(468781,300000) GeneWise cds 250432 250379 0.00 - 0 GL841475.1:subseq(468781,300000)-genewise-prediction-1 GL841475.1:subseq(468781,300000) GeneWise intron 250378 250001 0.00 - . GL841475.1:subseq(468781,300000)-genewise-prediction-1 GL841475.1:subseq(468781,300000) GeneWise cds 250000 249895 0.00 - 0 GL841475.1:subseq(468781,300000)-genewise-prediction-1 GL841475.1:subseq(468781,300000) GeneWise intron 249894 241051 0.00 - . GL841475.1:subseq(468781,300000)-genewise-prediction-1 GL841475.1:subseq(468781,300000) GeneWise cds 241050 240919 0.00 - 2 GL841475.1:subseq(468781,300000)-genewise-prediction-1 GL841475.1:subseq(468781,300000) GeneWise intron 240918 237583 0.00 - . GL841475.1:subseq(468781,300000)-genewise-prediction-1 GL841475.1:subseq(468781,300000) GeneWise cds 237582 237458 0.00 - 2 GL841475.1:subseq(468781,300000)-genewise-prediction-1 //