genewise output Score 673.64 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000015_1.0 19 KYSAVDTNPLSLYVMHPFWNTIVK VF +Y AVDTNPLSLYVMHPFWNTIVK +F QYKAVDTNPLSLYVMHPFWNTIVK IF GL856719.1:subs14331 ctagggaacctttgaccttaaagaGTAAGAC Intron 1 TAGat aaactacactctattactgactta<0-----[14403:16284]-0>tt gcgtgtctgctgttgcatgttaag tt SPP00000015_1.0 45 PTWLAPNLITFSGFLLVVFNFLLMAYFDPDFYAS PTWLAPNLIT+SGFLL+VFNFLLMAYFDPDF+AS PTWLAPNLITLSGFLLLVFNFLLMAYFDPDFFAS GL856719.1:subs16291 catcgcataactgtctcgtattcagttgcgttgt ccgtccattctcgttttttattttcatacattcc tgggtgtgacaactgatactcatgcctttctcaa SPP00000015_1.0 79 PGHKHVPDWVWIVVGILNFVAYT PGHKHVP W+WIVVGILNFVAYT A:A[gca] PGHKHVPGWIWIVVGILNFVAYT GL856719.1:subs16393 GGTAAGAC Intron 2 CAGCAcgcacgcgtatagggacatggta <1-----[16394:18251]-1> cgaaatcggtgtttgttattcac atcatatagagtagccttcttct SPP00000015_1.0 103 L GVDGKQARRTNSSTPLGELFDH L GVDGKQARRTNSSTPLGELFDH L D:D[gat] GVDGKQARRTNSSTPLGELFDH GL856719.1:subs18323 cGGTAAGAT Intron 3 CAGATggggacgcaaataactggttgc t <1-----[18327:19656]-1> gtagaacggcacgcctgattaa a tttagattaccccttaaaattt SPP00000015_1.0 127 GLDSWSCVYFVVTVYSIFGRGSTGVSVFVLYLLLWVVLFSFILSHWEKY GLDSWSCVYFVVTVYSIFGRG+TGVSVFVLY LLWVVLFSFILSHWEKY GLDSWSCVYFVVTVYSIFGRGTTGVSVFVLYTLLWVVLFSFILSHWEKY GL856719.1:subs19725 gtgatttgttggagttatgcgaaggagtgttacttggttttactctgat gtaggcgtatttctacttgggccgtgttttacttgttttctttcagaaa aattgattctagtatcctagaagccttttattcagacgtttcgccgagt SPP00000015_1.0 176 NTGILFLPWGYDISQV TISFVYIVTA NTGILFLPWGYDISQV TIS VYIVTA NTGILFLPWGYDISQV TISVVYIVTA GL856719.1:subs19872 aagacttctgtgaacgGTAAGTT Intron 4 CAGaatggtagag acgttttcggaatgat<0-----[19920:20702]-0>ctcttattcc taatccgtgatctcgg ttttccagtg SPP00000015_1.0 202 VVGVEAWYEPFLFNFLYRDLFTAMII +VGVEAWYEPFLFNFLYRDLFTAMII IVGVEAWYEPFLFNFLYRDLFTAMII G:G[gga] GL856719.1:subs20733 agggggttgctctatttagctagaaaGGTAAGAA Intron 5 ttgtacgaactttattagattccttt <1-----[20812:24887] tgatgcgtatcgttcatacactagtt SPP00000015_1.0 228 CALCVTLPMSLLNFF SYK CA CVTLPMSL NFF +Y+ CAACVTLPMSLYNFF R:K[aag] AYR GL856719.1:subs24885 TAGGAtggtgaccaattattAAGTAAGTT Intron 6 CAGGgta -1> gccgtctctgtaatt <2-----[24937:31436]-2> cag taatgtgtgtatctc cca SPP00000015_1.0 248 NNTLKLNSVYEAMVPLFSPCLLFILSTAWILWSPSDILELHPRVFYFMV NNTLK +S+YE M+P FSP LLFILST+WILWSPSDILE HPR+FY+MV NNTLKHSSIYETMLPFFSPFLLFILSTSWILWSPSDILETHPRLFYYMV GL856719.1:subs31447 aaatacatatgaacctttcttctacaaatacttctgatgaccactttag aactaagctaacttcttccttttttgcggttgcccattacacgttaatt tccggctcctaaggctttatgtctgtatgccgaatttagattatcccgt SPP00000015_1.0 297 GTAFANST CQLIVCQMSSTRCPTLNW GTAFAN T C+LIVCQMS+TRC TLN GTAFANIT CRLIVCQMSNTRCQTLNL GL856719.1:subs31594 gagtgaaaGTGAGAA Intron 7 AAGtccagtcaaaaatcacac gcctcatc<0-----[31618:34174]-0>ggtttgatgacggactat aattccca tcttgtggccaacatgta SPP00000015_1.0 323 LLVPLFLVVLVVNLGVASYVESILLYTLTTAFTLAHIHYGVRV LLVPL LVVL+V L ++ ++E ILLY L+ +TLAH+HYG++V LLVPLALVVLLVYLELSPHMEPILLYLLSIIITLAHVHYGIQV GL856719.1:subs34229 tcgccgcggctgttgttccagcaccttcaaaaatgcgctgacg tttctcttttttatatccatactttattgtttctcataagtat gtaagcccttgacaaatttgacttccaacttttgatcttaaag SPP00000015_1.0 366 VKQLSSHFQIYPFSLRKPNSD V QLSSHF+I PFSLRKP+SD VNQLSSHFKILPFSLRKPSSD GL856719.1:subs34358 GTAAGTC Intron 8 CAGgactaactaacctttaacatg <0-----[34358:37228]-0>taatggatattctctgacgca tcggctctgtattaaaaacat // Making a A in phase 1 intron Making a D in phase 1 intron Making a G in phase 1 intron Making a K in phase 2 intron >GL856719.1:subseq(0,300000).pep QYKAVDTNPLSLYVMHPFWNTIVKIFPTWLAPNLITLSGFLLLVFNFLLMAYFDPDFFAS APGHKHVPGWIWIVVGILNFVAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWSCVYFVV TVYSIFGRGTTGVSVFVLYTLLWVVLFSFILSHWEKYNTGILFLPWGYDISQVTISVVYI VTAIVGVEAWYEPFLFNFLYRDLFTAMIIGCAACVTLPMSLYNFFKAYRNNTLKHSSIYE TMLPFFSPFLLFILSTSWILWSPSDILETHPRLFYYMVGTAFANITCRLIVCQMSNTRCQ TLNLLLVPLALVVLLVYLELSPHMEPILLYLLSIIITLAHVHYGIQVVNQLSSHFKILPF SLRKPSSD // >GL856719.1:subseq(0,300000).[14331:37291].sp CAGTACAAGGCTGTGGATACCAATCCGCTCTCTTTGTATGTTATGCACCCATTTTGGAAT ACTATAGTAAAGATTTTTCCTACGTGGCTGGCTCCGAATTTGATAACCCTATCAGGCTTT CTGTTACTTGTATTCAATTTCTTACTTATGGCCTACTTTGATCCTGACTTTTTCGCATCA GCACCAGGTCACAAACATGTACCTGGATGGATATGGATTGTAGTGGGCATCCTTAATTTC GTTGCTTACACTCTAGATGGTGTTGATGGAAAGCAAGCTCGTAGAACCAACTCCAGCACT CCTTTAGGAGAATTATTTGATCATGGATTAGATAGTTGGTCATGTGTTTACTTTGTAGTG ACTGTATATTCCATCTTTGGACGGGGAACAACGGGCGTCAGTGTTTTTGTTTTATATACT CTCTTATGGGTAGTCTTGTTTTCTTTTATCCTGTCCCACTGGGAAAAGTATAATACAGGA ATTCTCTTCTTGCCTTGGGGATATGACATTAGCCAGGTGACTATTTCTGTTGTCTACATA GTGACTGCGATTGTGGGAGTTGAGGCCTGGTATGAACCTTTCCTGTTTAATTTCTTATAT AGAGACCTATTCACTGCAATGATTATTGGATGTGCAGCATGTGTGACTCTGCCTATGAGT TTATATAACTTTTTCAAGGCCTACAGAAATAACACCTTGAAGCACAGTTCCATCTATGAA ACAATGCTGCCCTTTTTTTCTCCATTTTTGCTTTTCATTCTGAGTACAAGTTGGATCCTC TGGTCACCATCTGATATTTTAGAGACACATCCTAGACTTTTCTACTACATGGTTGGAACA GCTTTTGCCAACATCACATGTCGCCTTATTGTGTGTCAGATGAGCAACACAAGATGCCAA ACTCTGAATCTATTGCTTGTACCACTGGCCCTCGTCGTTCTTTTGGTATACTTAGAATTA TCTCCTCATATGGAACCCATTCTTCTCTACTTACTAAGCATTATTATTACTTTGGCACAT GTCCATTATGGAATACAAGTGGTTAACCAGTTGAGCAGTCACTTTAAGATTCTACCTTTT TCATTAAGAAAACCAAGCTCAGAT // GL856719.1:subseq(0,300000) GeneWise match 14331 37291 673.64 + . GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise cds 14331 14402 0.00 + 0 GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise intron 14403 16284 0.00 + . GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise cds 16285 16393 0.00 + 0 GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise intron 16394 18251 0.00 + . GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise cds 18252 18326 0.00 + 2 GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise intron 18327 19656 0.00 + . GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise cds 19657 19919 0.00 + 2 GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise intron 19920 20702 0.00 + . GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise cds 20703 20811 0.00 + 0 GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise intron 20812 24887 0.00 + . GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise cds 24888 24936 0.00 + 2 GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise intron 24937 31436 0.00 + . GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise cds 31437 31617 0.00 + 1 GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise intron 31618 34174 0.00 + . GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise cds 34175 34357 0.00 + 0 GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise intron 34358 37228 0.00 + . GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise cds 37229 37291 0.00 + 0 GL856719.1:subseq(0,300000)-genewise-prediction-1 // genewise output Score 26.24 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000015_1.0 153 VFVLYLLLWVVLFSFILSH VFV +++L+V+ + F++SH VFVFFVILFVLFYCFLISH GL856719.1:su-140911 gtgttgactgttttttatc ttttttttttttagtttca gtcttcttttgtttcgttt // >GL856719.1:subseq(0,300000).pep VFVFFVILFVLFYCFLISH // >GL856719.1:subseq(0,300000).[140911:140853].sp GTGTTTGTCTTTTTTGTCATTCTTTTTGTTTTGTTTTATTGTTTCTTGATTTCTCAT // GL856719.1:subseq(0,300000) GeneWise match 140911 140855 26.24 - . GL856719.1:subseq(0,300000)-genewise-prediction-1 GL856719.1:subseq(0,300000) GeneWise cds 140911 140855 0.00 - 0 GL856719.1:subseq(0,300000)-genewise-prediction-1 //