genewise output
Score 21.42 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000011_1.0   95 EFGPSHFSVLA                                       
                     E GPSH+SVLA                                       
                     ENGPSHYSVLA                                       
GL841771.1     94448 gagctcttgcg                                       
                     aagccaacttc                                       
                     atcttcttggt                                       


//
>GL841771.1.pep
ENGPSHYSVLA
//
>GL841771.1.[94448:94480].sp
GAAAATGGCCCTTCTCACTATTCTGTGCTGGCT
//
GL841771.1	GeneWise	match	94448	94480	21.42	+	.	GL841771.1-genewise-prediction-1
GL841771.1	GeneWise	cds	94448	94480	0.00	+	0	GL841771.1-genewise-prediction-1
//

genewise output
Score 390.95 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000011_1.0    1 MEPLAAYPLKCSGPRAKVFAVLLSIVLCTVTLFLLQLKFLKPKINSFYA 
                     MEPLAA PLKCS P+A+++AVLLS+VLC+VTLFLLQL++LKPKI  FY+ 
                     MEPLAATPLKCSIPKARLIAVLLSMVLCSVTLFLLQLRYLKPKIKDFYS 
GL841771.1   -117633 agccggaccattacagacaggtttagcttgattccccatcacaaagttt 
                     tactcccctagctcacgttctttctttgctcttttatgatacataatac 
                     ggtcagtggaccccgcggtcgggtgtgcgacgcgggggcagtacacctt 


SPP00000011_1.0   50 FEVKDAKGRTVSLEKYKGK                       VSLVVNV 
                     FEVKD+KGRTVSLEKY+GK                        SL+VNV 
                     FEVKDSKGRTVSLEKYRGK                       ASLIVNV 
GL841771.1   -117486 tggagtagaagttgatagaGTAAGTT  Intron 1   GAGgtcagag 
                     tataacaggctctaaagga<0-----[117429:11678-0>cctttat 
                     taggtagagtttgggcaca                       tagtacg 


SPP00000011_1.0   76 ASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVES 
                     AS+CQ TDRNYL L+ELH+EFG  HF+VLAFPCNQFGESEPRPS E+E+ 
                     ASNCQHTDRNYLALQELHREFGSFHFNVLAFPCNQFGESEPRPSHEIEA 
GL841771.1   -116765 gaatccagaattgccgcccgtgttctagtgtctactggtgcccacgagg 
                     cgagaacagaatctaatagatgctatattctcgaatgacacgcgaatac 
                     ctccgcacatcagggggcagtagcccccgtcgctgtaacgccctcaaat 


SPP00000011_1.0  125 FARKNYGVTFPIFHKIKILGSEGEPAFRFLV                   
                     F + NYGVTFPIFHKIKILGSEGEPAFRFL+                   
                     FVKSNYGVTFPIFHKIKILGSEGEPAFRFLI                   
GL841771.1   -116618 tgatatggatcatcaaaacgtgggcgtatca                   
                     ttacaagtctcttaatattgcagacctgttt                   
                     taacctcaccctccgtgtaataaatatactt                   


SPP00000011_1.0  156                           SSKKEPRWNFWKYLVNPEGQVVK 
                                               SSKKEPRWNFWKYLVNPEG+VVK 
                               D:D[gat]        SSKKEPRWNFWKYLVNPEGKVVK 
GL841771.1   -116525 GGTAAATA  Intron 2   TAGATttaagcatattatcgacggagga 
                      <1-----[116524:11287-1>  ccaaacggatgaattacagatta 
                                               aagggaagttgattcttgtatgg 


SPP00000011_1.0  180 FWKPEEPIEVIRPDIAALVRQVIIKKKEDL                    
                     FW+PEE +E IRPD+AALVRQ+IIKKKEDL                    
                     FWRPEESLEAIRPDVAALVRQIIIKKKEDL                    
GL841771.1   -112804 ttacggttggaacggggtgacaaaaaaggc                    
                     tggcaactactgcatccttgatttaaaaat                    
                     cgatgacgaccaataatataacctagaact                    


//
Making a D in phase 1 intron
>GL841771.1.pep
MEPLAATPLKCSIPKARLIAVLLSMVLCSVTLFLLQLRYLKPKIKDFYSFEVKDSKGRTV
SLEKYRGKASLIVNVASNCQHTDRNYLALQELHREFGSFHFNVLAFPCNQFGESEPRPSH
EIEAFVKSNYGVTFPIFHKIKILGSEGEPAFRFLIDSSKKEPRWNFWKYLVNPEGKVVKF
WRPEESLEAIRPDVAALVRQIIIKKKEDL
//
>GL841771.1.[117633:112713].sp
ATGGAGCCTCTCGCAGCGACTCCGCTGAAATGCTCCATCCCCAAGGCCAGGCTGATTGCC
GTGTTGTTGTCTATGGTTCTGTGCTCGGTAACCTTGTTCCTGCTGCAGCTGAGGTACCTA
AAGCCTAAAATCAAAGACTTCTATTCTTTTGAAGTGAAGGATTCAAAGGGAAGGACTGTT
TCTTTGGAGAAGTACAGAGGCAAAGCTTCACTGATTGTAAACGTGGCCAGTAACTGCCAG
CACACAGACAGAAATTACTTAGCGCTGCAGGAGCTGCACCGAGAGTTTGGATCGTTCCAC
TTCAACGTCTTGGCTTTCCCGTGCAATCAGTTTGGAGAATCCGAGCCCCGCCCCAGTCAC
GAAATAGAAGCTTTTGTAAAATCCAACTATGGCGTAACCTTCCCCATTTTCCACAAGATT
AAGATTCTAGGATCTGAAGGAGAACCTGCATTTAGATTCCTTATTGATTCATCAAAGAAG
GAGCCAAGATGGAATTTTTGGAAATATCTTGTCAATCCTGAGGGTAAAGTTGTGAAGTTC
TGGAGACCTGAGGAATCCTTGGAAGCCATCAGACCAGATGTAGCAGCTTTAGTTAGACAA
ATCATCATTAAAAAGAAAGAAGACCTT
//
GL841771.1	GeneWise	match	117633	112715	390.95	-	.	GL841771.1-genewise-prediction-1
GL841771.1	GeneWise	cds	117633	117430	0.00	-	0	GL841771.1-genewise-prediction-1
GL841771.1	GeneWise	intron	117429	116787	0.00	-	.	GL841771.1-genewise-prediction-1
GL841771.1	GeneWise	cds	116786	116525	0.00	-	0	GL841771.1-genewise-prediction-1
GL841771.1	GeneWise	intron	116524	112876	0.00	-	.	GL841771.1-genewise-prediction-1
GL841771.1	GeneWise	cds	112875	112715	0.00	-	2	GL841771.1-genewise-prediction-1
//