genewise output
Score 19.31 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000010_1.0  163 VSVEEVRPQITALVRKLILLKREDL                         
                     +S EE   ++ +L R   L  REDL                         
                     ISAEETEAELVSLSRTSRLALREDL                         
GL856722.1:sub269596 atgggagggcgattaatccgtaggc                         
                     tccaacacattgtcgccgtctgaat                         
                     agcgaggaagccgtgcagaagggtg                         


//
>GL856722.1:subseq(0,300000).pep
ISAEETEAELVSLSRTSRLALREDL
//
>GL856722.1:subseq(0,300000).[269596:269670].sp
ATATCGGCCGAGGAAACGGAGGCAGAACTGGTCAGCTTGTCTAGGACCTCACGGCTAGCA
TTGAGGGAGGATCTG
//
GL856722.1:subseq(0,300000)	GeneWise	match	269596	269670	19.31	+	.	GL856722.1:subseq(0,300000)-genewise-prediction-1
GL856722.1:subseq(0,300000)	GeneWise	cds	269596	269670	0.00	+	0	GL856722.1:subseq(0,300000)-genewise-prediction-1
//

genewise output
Score 282.82 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000010_1.0   47 VSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPD 
                     VSLVVNVASECG+TDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPD 
                     VSLVVNVASECGYTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPD 
GL856722.1:sub-76923 gtcggaggagtgtagcctcgccccccgcgccctagcgtctactgccgcg 
                     tctttatcgaggacaaaagctaatagatgcaatattctcgaatgaaaca 
                     gagtccgctgtccacgccactgggggcgcgctccggcttccgtgggggc 


SPP00000010_1.0   96 SNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLA            
                     +NKEIE+FAR+TY VSFPMFSKIAV G GA+ AFKYL             
                     TNKEIENFARKTYGVSFPMFSKIAVRGAGANAAFKYLI            
GL856722.1:sub-76776 aaagagatgcaatggttcataaaggcggggaggtatca            
                     caaataatcgacagtctcttgatctggcgcacctaatt            
                     ccggtactgggttattccgccgctctttgctcccatat            


SPP00000010_1.0  134                           TSGKEPTWNFWKYLVAPDGKVVG 
                                               +SG+EPTWNFWKYLVAP+GKVVG 
                               Q:E[gaa]        SSGEEPTWNFWKYLVAPNGKVVG 
GL856722.1:sub-76662 GGTGAGCT  Intron 1   CAGAAttgggcatattattggcagaggg 
                      <1-----[76661:75768]-1>  ccgaaccgatgaattccagattg 
                                               ccgaaatgtcggcaccgtaagga 


SPP00000010_1.0  158 AWDPTVSVEEVRPQITALVRKLILLKREDL                    
                      WD TVSVEE+RP+I  LV KLI+ K+E+L                    
                     TWDSTVSVEEIRPKIHELVGKLIVGKKEEL                    
GL856722.1:sub-75696 atgtagtgggaccaacgcggacaggaaggt                    
                     cgacctctaatgcataattgatttgaaaat                    
                     cgcataaaaatacgctgcgggccggggaaa                    


//
Making a E in phase 1 intron
>GL856722.1:subseq(0,300000).pep
VSLVVNVASECGYTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDTNKEIENFARK
TYGVSFPMFSKIAVRGAGANAAFKYLIESSGEEPTWNFWKYLVAPNGKVVGTWDSTVSVE
EIRPKIHELVGKLIVGKKEEL
//
>GL856722.1:subseq(0,300000).[76923:75605].sp
GTGTCACTGGTTGTCAACGTGGCCAGTGAGTGTGGCTACACAGACCAGCACTACCGAGCC
CTTCAGCAGCTGCAGCGGGACCTGGGCCCGCACCATTTCAACGTGCTGGCCTTTCCTTGC
AACCAGTTTGGGCAGCAGGAGCCGGACACCAACAAGGAGATTGAAAACTTTGCGCGGAAG
ACTTATGGAGTTTCTTTCCCCATGTTCAGCAAGATCGCTGTCCGTGGTGCTGGGGCCAAT
GCCGCCTTCAAATATCTAATTGAATCCTCCGGGGAAGAACCAACTTGGAATTTCTGGAAG
TACTTAGTCGCCCCGAATGGAAAAGTGGTGGGAACCTGGGACTCAACTGTATCAGTAGAA
GAAATTCGACCCAAGATCCATGAGCTCGTGGGGAAGCTCATCGTGGGGAAGAAGGAAGAA
TTA
//
GL856722.1:subseq(0,300000)	GeneWise	match	76923	75607	282.82	-	.	GL856722.1:subseq(0,300000)-genewise-prediction-1
GL856722.1:subseq(0,300000)	GeneWise	cds	76923	76662	0.00	-	0	GL856722.1:subseq(0,300000)-genewise-prediction-1
GL856722.1:subseq(0,300000)	GeneWise	intron	76661	75768	0.00	-	.	GL856722.1:subseq(0,300000)-genewise-prediction-1
GL856722.1:subseq(0,300000)	GeneWise	cds	75767	75607	0.00	-	2	GL856722.1:subseq(0,300000)-genewise-prediction-1
//