genewise output
Score 523.60 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000002_1.0    1 MGILSVDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRG 
                     MG+LS+DLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRG 
                     MGLLSIDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRG 
GL834538.1:subs50000 agccaagttaaccaccgtttatctcgctgtgaccacggcccactatacg 
                     tgttgtatttctattctttcagtttctaacttttaatttttggcaccgg 
                     gtgccacggtagacgattcccctcgtctcgcccagcgggagcgcgcttc 


SPP00000002_1.0   50 EWRRMLTSEGLRCVWKSFLLDAYKQ                       V 
                     EWRRMLTSEGLRCVWKSFLLDAYKQ                       V 
                     EWRRMLTSEGLRCVWKSFLLDAYKQ                       V 
GL834538.1:subs50147 gtccacatggcctgtaatccggtacGTAAGTC  Intron 1   TAGg 
                     agggttccagtggtgagtttacaaa<0-----[50222:59831]-0>t 
                     gggcggcaagactcgactcgttcag                       g 


SPP00000002_1.0   76 KLGEDAPNSSVVHVSSTEGGDNSGNGTQEKIAEG---ATCHLLDFASPE 
                     KLG DAPNSSVVH++S E G+   N ++ K  +G   A CHLLDFA+PE 
                     KLGGDAPNSSVVHITSAEVGNGQQNNSKWKRFDGGYGAECHLLDFANPE 
GL834538.1:subs59835 atggggcataggcaaaggggagccaatataatgggtgggtcccgtgacg 
                     atggaccacgttatcgcatgagaaaacagagtaggagcagattatcaca 
                     agtatgctcttcctcttatgttagttcgggattgataagctcgttcctg 


SPP00000002_1.0  122 RPLVVNFGSATXPPFTSQLPAFRKLVEEFSSVADFLLVYIDEAHPSDGW 
                     RPLVVNFGSATXPPFTSQLPAF KLVEEFS+VADFLLVYIDEAHPSDGW 
                     RPLVVNFGSATXPPFTSQLPAFSKLVEEFSTVADFLLVYIDEAHPSDGW 
GL834538.1:subs59982 cccggatgtgatcctaacccgtaacgggttagggtttgtagggcctggt 
                     gctttatgcccgcctcgatcctgattaatcctcattttataacaccagg 
                     taggccttattaagcacgggctcgggagcaagtccggccttattaattg 


SPP00000002_1.0  171 AIPGDSSLSFEVKKHQNQEDRCAAAQQLLERFSLPPQCRVVADRMDNNA 
                     A+PG+SS+SFEVKKHQNQEDRCAAA QLLERFSLPPQC+VVAD MDNNA 
                     AVPGNSSVSFEVKKHQNQEDRCAAAHQLLERFSLPPQCQVVADCMDNNA 
GL834538.1:subs60129 ggcgattgttggaaccacggctgggccccgctttccctcggggtagaag 
                     ctcgacctctataaaaaaaaggcccaattagtctccagattcagtaaac 
                     gatttctgtcgggacgcgacctaactatggtccggcgcgggtccgtctc 


SPP00000002_1.0  220 NIAYGVAFERVCIVQRQKIAYLGGKGPFSYNLQEVRHWLEKNFSKR    
                     NIAYGV+FERVCIVQRQKIAYLGGKGPF YNLQEVR WLEKNFSKR    
                     NIAYGVSFERVCIVQRQKIAYLGGKGPFFYNLQEVRLWLEKNFSKR    
GL834538.1:subs60276 aagtggttgcgtagcacaagttggagctttaccggccttgaataaa    
                     atcagtctagtgttagaatcatggagcttaataatgtgtaaatgag    
                     cactgactgtgttggaaattcaaggcctctctgatatgaggcccga    


//
>GL834538.1:subseq(998020,300000).pep
MGLLSIDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRGEWRRMLTSEGL
RCVWKSFLLDAYKQVKLGGDAPNSSVVHITSAEVGNGQQNNSKWKRFDGGYGAECHLLDF
ANPERPLVVNFGSATXPPFTSQLPAFSKLVEEFSTVADFLLVYIDEAHPSDGWAVPGNSS
VSFEVKKHQNQEDRCAAAHQLLERFSLPPQCQVVADCMDNNANIAYGVSFERVCIVQRQK
IAYLGGKGPFFYNLQEVRLWLEKNFSKR
//
>GL834538.1:subseq(998020,300000).[50000:60413].sp
ATGGGTCTGCTCAGCATAGACTTGTTGATTACACTGCAAATCCTGCCAGTTTTTTTCTCC
AACTGCCTTTTCCTGGCTCTCTATGACTCGGTCATCCTCCTAAAGCACGTGGTGCTGCTA
CTGAGCCGGTCCAAGTCCACTCGTGGCGAGTGGCGGCGCATGCTGACCTCAGAAGGGCTA
CGCTGTGTCTGGAAAAGCTTTCTCCTGGATGCTTACAAACAGGTGAAATTGGGTGGAGAT
GCGCCCAATTCCAGTGTTGTCCACATTACCAGTGCTGAAGTTGGGAATGGTCAACAGAAT
AATTCCAAGTGGAAGAGATTTGATGGGGGATATGGAGCAGAGTGCCATCTCCTGGATTTT
GCCAACCCTGAGCGTCCACTGGTGGTCAACTTTGGTTCAGCTACTTGACCACCGTTCACA
AGCCAGCTGCCGGCCTTTAGCAAGCTGGTGGAAGAGTTCTCAACAGTGGCTGACTTCTTG
TTGGTCTACATTGATGAAGCTCATCCATCAGATGGTTGGGCGGTACCTGGTAATTCCTCT
GTGTCTTTCGAGGTGAAGAAACACCAGAACCAGGAAGACCGCTGTGCAGCAGCCCATCAA
CTTCTGGAGCGTTTCTCCTTGCCGCCCCAGTGCCAGGTGGTGGCTGACTGCATGGATAAC
AATGCCAACATAGCCTATGGGGTATCCTTTGAGCGTGTGTGTATTGTGCAGAGACAAAAA
ATTGCTTACTTAGGAGGGAAGGGCCCCTTTTTCTATAACCTTCAGGAAGTTCGACTTTGG
TTAGAGAAGAACTTCAGCAAGAGA
//
GL834538.1:subseq(998020,300000)	GeneWise	match	50000	60413	525.60	+	.	GL834538.1:subseq(998020,300000)-genewise-prediction-1
GL834538.1:subseq(998020,300000)	GeneWise	cds	50000	50221	0.00	+	0	GL834538.1:subseq(998020,300000)-genewise-prediction-1
GL834538.1:subseq(998020,300000)	GeneWise	intron	50222	59831	0.00	+	.	GL834538.1:subseq(998020,300000)-genewise-prediction-1
GL834538.1:subseq(998020,300000)	GeneWise	cds	59832	60413	0.00	+	0	GL834538.1:subseq(998020,300000)-genewise-prediction-1
//

genewise output
Score 20.99 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000002_1.0   15 LPVFFSNCLFLALYDSVI                                
                     +P+FFS C+F  L+  ++                                
                     IPIFFSACIFDFLHRLIV                                
GL834538.1:subs-2780 acatttgtatgtccatag                                
                     tctttccgttattagttt                                
                     ctatttcctttctcgata                                


//
>GL834538.1:subseq(998020,300000).pep
IPIFFSACIFDFLHRLIV
//
>GL834538.1:subseq(998020,300000).[2780:2725].sp
ATCCCTATATTTTTTTCTGCCTGCATTTTTGATTTCCTTCACAGGTTAATTGTA
//
GL834538.1:subseq(998020,300000)	GeneWise	match	2780	2727	20.99	-	.	GL834538.1:subseq(998020,300000)-genewise-prediction-1
GL834538.1:subseq(998020,300000)	GeneWise	cds	2780	2727	0.00	-	0	GL834538.1:subseq(998020,300000)-genewise-prediction-1
//