genewise output Score 18.87 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000032_1.0 120 DNMLMLLGVSNKMTDRERDKVM +NM L G N +TD E ++ + ENMATLFGDVNDLTDEENEETQ GL861628.1:subs58435 gaagactgggagcagggaggac aatccttgataatcaaaaaaca atgctccatcttgacggtaacg // >GL861628.1:subseq(1532909,300000).pep ENMATLFGDVNDLTDEENEETQ // >GL861628.1:subseq(1532909,300000).[58435:58500].sp GAAAATATGGCCACTCTCTTCGGAGATGTCAATGATCTGACAGACGAGGAGAATGAAGAA ACCCAG // GL861628.1:subseq(1532909,300000) GeneWise match 58435 58500 18.87 + . GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise cds 58435 58500 0.00 + 0 GL861628.1:subseq(1532909,300000)-genewise-prediction-1 // genewise output Score 838.43 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000032_1.0 1 MSTRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENH MS RE+FNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLE LQENH MSVRETFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLECLQENH GL861628.1:su-250000 atgcgatacgatgtgaatccactagcagagtagccggccatcgttcgac tctgactacagaataagtgtcgtcatagcggatcaattaattagtaaaa gttgattcaatcagtgtcgacactaggcaccgaaatcagaggacaagtc SPP00000032_1.0 50 FQEDEQFLGAVMPRL IGMDTCVI FQEDEQFLGAVMPRL IGMDTCVI FQEDEQFLGAVMPRL G:G[ggc] IGMDTCVI GL861628.1:su-249853 tcgggcttgggacacGGTATGTA Intron 1 CAGGCagagatga taaaaattgcttcgt <1-----[249807:24286-1> tgtacgtt cgatagtgaatgaga tagttttt SPP00000032_1.0 74 PLRHGGLSLVQTTDYIYPIVDDPYMM PLRHGGLSLVQTTDYIYPIVDDPYMM PLRHGGLSLVQTTDYIYPIVDDPYMM GL861628.1:su-242836 ctacggcttgcaagtatcagggctaaGTGAGTC Intron 2 CAG ctgaggtcttaccaatacttaacatt<0-----[242758:23785-0> tgatttttgtgcatcttttgtttcgg SPP00000032_1.0 100 GRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDR GRIACANVLSDLYAMGVTECDNMLMLLG+SNKMTDR GRIACANVLSDLYAMGVTECDNMLMLLGISNKMTDR GL861628.1:su-237849 gcagtgagcagctgaggagtgaataccgaaaaaaga ggtcgcattgatactgtcagaatttttgtgaatcag cgactcttatctctgtcgatccgggctatttagacg SPP00000032_1.0 136 ERDKVMPLIIQGFKDAAEEAGTSVTG ERDKV+PLIIQGFKDAAEEAGTSVTG ERDKVIPLIIQGFKDAAEEAGTSVTG GL861628.1:su-237741 GTAAGAT Intron 3 TAGgagagactaacgtagggggggatgag <0-----[237741:23500-0>agaattctttagtaaccaacgcctcg agcagacatagttataagaaaatatt SPP00000032_1.0 162 GQTVLNPWIVLGGVATTVCQPNEFI GQTVLNPWIVLGGVATTVCQPNEFI GQTVLNPWIVLGGVATTVCQPNEFI M:M[atg] GL861628.1:su-234925 gcagtactagtggggaagtccagtaATGTAAGTT Intron 4 gacttacgtttggtccctgacaatt <2-----[234848:232694 caaggtcgcagtaataactgctgtc SPP00000032_1.0 187 PDNAVPGDVLVLTKPLGTQVAVAVHQWLDI PDNAVPGDVLVLTKPLGTQVAVAVHQWLDI PDNAVPGDVLVLTKPLGTQVAVAVHQWLDI GL861628.1:su-232696 TAGGcgaggcgggcgtaaccgacgggggccttga -2> caactcgattttcactgcatctctaagtat ttttgaatgtagaacgaaaatatgcgggtt SPP00000032_1.0 218 PEKWNKIKLVVTQEDVELAYQEAMMN PEKWNKIKLVVTQEDVELAYQEAMMN PEKWNKIKLVVTQEDVELAYQEAMMN GL861628.1:su-232602 GTAAGTA Intron 5 TAGcgataaaacggacggggtgtcggaaa <0-----[232602:23017-0>caagaatatttcaaatatcaaactta aaggtatacgccgatgggataaaggc SPP00000032_1.0 244 MARLNRT AGLMHTFNAHAATDIT MARLNRT AGLMHTFNAHAATDIT MARLNRT A:A[gct] AGLMHTFNAHAATDIT GL861628.1:su-230099 agacacaGGTAGGAA Intron 6 TAGCTggcacatagcggagaa tcgtagc <1-----[230077:21707-1> cgttactacacccatc gtgccaa tacgctttacacgcca SPP00000032_1.0 268 GFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGT GFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGT GFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGT GL861628.1:su-217019 gtgatgcgcacgaccaaggttgacaccgtgaagggaagtgaatgcacga gtgttgacaatcaaagaatctttaatcttcatcctgacggattgttagc gtgcgctagctcggggtaactcccttaggcggtcttgctacgtctgtac SPP00000032_1.0 317 CPETS GLLICLPREQAARFCAEI CPETS GLLICLPREQAARFCAEI CPETS G:G[gga] GLLICLPREQAARFCAEI GL861628.1:su-216872 tcgatGGTGAGGC Intron 7 CAGGAgccattccgcggcttgga gcacc <1-----[216856:21421-1> gtttgtcgaaccgtgcat tagaa ctgctaatggattccagt SPP00000032_1.0 341 KSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPG KSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPG KSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNVNPTPG GL861628.1:su-214158 atcatgggccgtaagaggagacagaaagaccaagggccggacagacacg accaagagaacgttgttaagagccgttaacgttatccatccaatacccg accatgatcaagttgtagacctacatacgcgccaaaaagccatgtcgtt SPP00000032_1.0 390 ATS ATS ATS GL861628.1:su-214011 gat ccc ccc // Making a G in phase 1 intron Making a M in phase 2 intron Making a A in phase 1 intron Making a G in phase 1 intron >GL861628.1:subseq(1532909,300000).pep MSVRETFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLECLQENHFQEDEQFLGAV MPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECD NMLMLLGISNKMTDRERDKVIPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVC QPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEA MMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMA AVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKG NRTARIIDKPRIIEVAPQVATQNVNPTPGATS // >GL861628.1:subseq(1532909,300000).[250000:214001].sp ATGTCTGTTCGGGAAACTTTTAACCCAGAAAGTTACGAATTGGATAAGAGTTTCCGGCTA ACCCGATTCACTGAACTGAAGGGCACAGGCTGCAAGGTACCACAAGATGTCCTACAGAAA TTGCTGGAATGCTTACAAGAGAATCACTTCCAGGAAGATGAACAGTTTTTGGGAGCAGTT ATGCCAAGGCTAGGCATTGGAATGGATACTTGTGTTATTCCTTTGAGACATGGTGGTCTT TCTTTGGTTCAGACCACAGATTACATTTATCCTATTGTGGATGATCCTTACATGATGGGC CGGATAGCCTGTGCCAATGTTCTAAGTGACCTTTACGCTATGGGTGTCACGGAATGTGAC AACATGTTGATGCTCCTTGGAATTAGTAATAAAATGACAGACAGGGAAAGGGACAAAGTG ATACCCTTAATTATACAGGGTTTTAAAGATGCAGCAGAGGAAGCAGGAACATCTGTAACT GGTGGCCAAACAGTGTTGAATCCCTGGATCGTATTGGGTGGAGTAGCTACAACAGTCTGT CAGCCCAATGAGTTTATCATGCCTGATAATGCTGTGCCAGGAGATGTGCTTGTATTGACA AAACCCCTGGGAACACAAGTAGCTGTAGCTGTGCACCAGTGGTTGGATATTCCAGAAAAG TGGAATAAAATTAAACTCGTGGTCACCCAGGAAGATGTGGAGTTGGCATATCAAGAAGCA ATGATGAACATGGCTAGGCTCAACCGAACAGCTGCTGGACTCATGCACACTTTTAATGCA CACGCAGCCACGGACATCACAGGGTTTGGGATCTTGGGCCATGCACAGAACCTTGCCAAG CAGCAGAGGAATGAAGTATCCTTTGTCATCCACAATCTTCCAGTGTTGGCCAAGATGGCT GCCGTTAGTAAGGCCTGTGGAAACATGTTTGGCCTTATGCATGGAACCTGTCCAGAGACA TCAGGAGGCCTTCTGATCTGTTTACCACGTGAGCAGGCAGCTCGTTTCTGCGCAGAGATT AAATCCCCCAAATATGGGGAAGGTCACCAAGCATGGATTATTGGGATTGTAGAGAAAGGC AACCGTACAGCCAGAATTATAGACAAGCCCCGGATCATCGAAGTAGCACCACAAGTGGCC ACCCAAAATGTGAATCCCACGCCTGGTGCCACCTCC // GL861628.1:subseq(1532909,300000) GeneWise match 250000 214003 838.43 - . GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise cds 250000 249808 0.00 - 0 GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise intron 249807 242863 0.00 - . GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise cds 242862 242759 0.00 - 2 GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise intron 242758 237850 0.00 - . GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise cds 237849 237742 0.00 - 0 GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise intron 237741 235004 0.00 - . GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise cds 235003 234849 0.00 - 0 GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise intron 234848 232694 0.00 - . GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise cds 232693 232603 0.00 - 1 GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise intron 232602 230178 0.00 - . GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise cds 230177 230078 0.00 - 0 GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise intron 230077 217070 0.00 - . GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise cds 217069 216857 0.00 - 2 GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise intron 216856 214215 0.00 - . GL861628.1:subseq(1532909,300000)-genewise-prediction-1 GL861628.1:subseq(1532909,300000) GeneWise cds 214214 214003 0.00 - 2 GL861628.1:subseq(1532909,300000)-genewise-prediction-1 //