genewise output Score 551.18 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info gi|74761781|sp| 1 MAASLWMGD LEPYMDENFISRAFATM MAASLWMGD LEPYMDENFISRAFATM MAASLWMGD LEPYMDENFISRAFATM GL849748.1:subs47778 aggtctaggGTAAGTG Intron 1 TAGcgctaggatatagtgaa tccctgtga<0-----[47805:49999]-0>tacataaattcgctcct ggctggggc gatcgcgctcgactccg gi|74761781|sp| 27 GETVMSVKIIRNRLT IPAGYCFV GETV+SVKIIRNRLT IPAGYCFV GETVLSVKIIRNRLT G:G[ggg] IPAGYCFV GL849748.1:subs50051 ggagcagaaacaccaGGGTATTGT Intron 2 CAGGacggtttg gacttgtattgagtc <2-----[50098:55251]-2> tccgagtt agcggtgaccccgct cttccctg gi|74761781|sp| 51 EFADLATAEKCLHKINGKPLPGATP A EFADLATAEKCLHKINGKPLPGATP A EFADLATAEKCLHKINGKPLPGATP A GL849748.1:subs55277 gtggcgaggattcaaagacccggacGTAAGGA Intron 3 CAGg atcatcccaagtaatagactcgccc<0-----[55352:56006]-0>c gtctgcttggtgtaataacccacaa a gi|74761781|sp| 77 KRFKLNYATYGKQPDN PEYSLFV KRFKLNYATYGKQPDN PEYSLFV KRFKLNYATYGKQPDN S:S[agc] PEYSLFV GL849748.1:subs56010 actacatgatgaccgaAGGTGAGTT Intron 4 CAGCcgttctg agtataaccagaacaa <2-----[56060:56575]-2> caacttt actagcccttgaactc cgcactg gi|74761781|sp| 101 GDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVS DL+PDVDDGMLYEFFVKVYPSCRGGKVVLDQ G+S RDLSPDVDDGMLYEFFVKVYPSCRGGKVVLDQAGIS GL849748.1:subs56598 agcacgggggactgttgagtcttcggaggcgcggat gatgcataagttaatttataccggggatttaacgtc gcccacgttcgccacttatccgtaacggcgcgaact gi|74761781|sp| 137 GYGFVKFTDELEQKRALTECQGA GYGFVKFTDELEQKRALTECQGA K:K[aag] GYGFVKFTDELEQKRALTECQGA GL849748.1:subs56706 AAGTAAGGC Intron 5 CAGGgtgtgataggcgcacgcagtcgg <2-----[56708:58375]-2> gagttatcaataaagctcagagc tttcgacatggagagcgtgcaga gi|74761781|sp| 161 VGLGSKPVRLSVAIPK SRVKPVE VGLGSKPVRLSVAIPK +RVKP+E VGLGSKPVRLSVAIPK A:A[gcg] NRVKPLE GL849748.1:subs58446 ggcgtacgccaggacaGCGTAAGTC Intron 6 AAGGaagaccg tgtgcactgtgtctca <2-----[58496:59382]-2> agtacta gggcggagcgcgttca caggtgg gi|74761781|sp| 185 YSQMYSYSYNQYYQQYQNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQ YSQMYSYS NQYYQQYQNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQ YSQMYSYSLNQYYQQYQNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQ GL849748.1:subs59405 tacatatacacttcctcattgctgtgcaagatatatcctgtacaaac agatagagtaaaaaaaaaaacaggaaaacggagagacaagacagcta ccggccccccgtcggcgcccaggctcgcacccccctcgccccgccgg gi|74761781|sp| 232 TYEEVGDDALE TYEEVGDDALE TYEEVGDDALE GL849748.1:subs59546 GTACCTC Intron 7 CAGatgggggggtg <0-----[59546:59914]-0>caaatgaacta acaactctaaa gi|74761781|sp| 243 PMPQLDVTEANKEFMEQSEELYD P PQLDV EAN+EFMEQSEELYD D:D[gac] PTPQLDVNEANREFMEQSEELYD GL849748.1:subs59948 GGTAAGGT Intron 8 TAGACcacccggaggaagtagcaggctg <1-----[59949:63462]-1> cccatataacagattaagaataa aacggcgtaccgacgagtagctt gi|74761781|sp| 267 ALMDCHWQPLDTVSSEIPAMM A+M+CHWQPLDTVSSEIP +M AMMNCHWQPLDTVSSEIPPVM GL849748.1:subs63534 gaaatctcctgagttgaccga cttagagactactccatcctt cggctcggtgctgaagcttgg // Making a G in phase 2 intron Making a S in phase 2 intron Making a K in phase 2 intron Making a A in phase 2 intron Making a D in phase 1 intron >GL849748.1:subseq(337936,300000).pep MAASLWMGDLEPYMDENFISRAFATMGETVLSVKIIRNRLTGIPAGYCFVEFADLATAEK CLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVRDLSPDVDDGMLYEFFVKVY PSCRGGKVVLDQAGISKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKANRV KPLEYSQMYSYSLNQYYQQYQNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQTYEEVGDDA LEDPTPQLDVNEANREFMEQSEELYDAMMNCHWQPLDTVSSEIPPVM // >GL849748.1:subseq(337936,300000).[47778:63596].sp ATGGCGGCCTCTCTGTGGATGGGGGACCTGGAACCTTACATGGACGAGAACTTTATCTCG AGAGCCTTTGCCACCATGGGAGAGACCGTGCTGAGTGTGAAAATCATCCGCAACCGGCTC ACTGGGATCCCTGCTGGCTACTGCTTTGTGGAGTTTGCCGATCTGGCCACTGCTGAGAAG TGTTTGCATAAAATAAATGGAAAACCCCTCCCCGGAGCCACACCAGCAAAACGCTTTAAA CTGAACTACGCCACTTATGGGAAACAACCCGATAACAGCCCCGAGTACTCACTCTTTGTG AGGGACCTCAGCCCAGACGTGGATGATGGCATGCTCTACGAATTCTTTGTTAAAGTTTAC CCCTCGTGTCGAGGAGGCAAGGTGGTCCTGGACCAGGCAGGAATCTCTAAGGGTTATGGT TTCGTGAAATTCACAGATGAGCTGGAACAGAAACGGGCCCTGACTGAGTGCCAAGGGGCA GTGGGGCTGGGCTCGAAGCCAGTGCGCCTGAGCGTGGCTATTCCCAAAGCGAACAGAGTG AAGCCTCTGGAGTACAGCCAGATGTACAGCTACAGCCTCAACCAGTATTACCAGCAGTAC CAGAACTACTACGCACAGTGGGGCTATGACCAGAACACAGGCAGCTACAGCTACAGCTAT CCCCAGTACGGCTACACCCAGAGCACCATGCAGACATACGAAGAAGTCGGTGACGATGCA TTAGAAGACCCAACACCCCAGCTGGACGTGAATGAAGCCAACAGGGAATTCATGGAACAG AGTGAAGAGCTCTATGATGCCATGATGAACTGTCACTGGCAGCCTTTGGACACTGTGTCA TCAGAGATCCCTCCTGTGATG // GL849748.1:subseq(337936,300000) GeneWise match 47778 63596 551.18 + . GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise cds 47778 47804 0.00 + 0 GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise intron 47805 49999 0.00 + . GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise cds 50000 50097 0.00 + 0 GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise intron 50098 55251 0.00 + . GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise cds 55252 55351 0.00 + 1 GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise intron 55352 56006 0.00 + . GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise cds 56007 56059 0.00 + 0 GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise intron 56060 56575 0.00 + . GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise cds 56576 56707 0.00 + 1 GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise intron 56708 58375 0.00 + . GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise cds 58376 58495 0.00 + 1 GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise intron 58496 59382 0.00 + . GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise cds 59383 59545 0.00 + 1 GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise intron 59546 59914 0.00 + . GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise cds 59915 59948 0.00 + 0 GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise intron 59949 63462 0.00 + . GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise cds 63463 63596 0.00 + 2 GL849748.1:subseq(337936,300000)-genewise-prediction-1 // genewise output Score 20.73 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info gi|74761781|sp| 272 HWQPLDTVSSEIP HW PL VSS P HWSPLQAVSSIAP GL849748.1:sub-70864 ctacccggttagc aggctactcctcc cgcaagactccct // >GL849748.1:subseq(337936,300000).pep HWSPLQAVSSIAP // >GL849748.1:subseq(337936,300000).[70864:70824].sp CACTGGAGCCCACTACAGGCAGTCTCTTCCATCGCCCCT // GL849748.1:subseq(337936,300000) GeneWise match 70864 70826 20.73 - . GL849748.1:subseq(337936,300000)-genewise-prediction-1 GL849748.1:subseq(337936,300000) GeneWise cds 70864 70826 0.00 - 0 GL849748.1:subseq(337936,300000)-genewise-prediction-1 //