TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP02 tRNA selenocysteine 1-associated protein 1 [Homo sapiens]
         (287 letters)

Database: /cursos/BI/genomes/project_2013/Saimiri_boliviensis/genome.f
a 
           2685 sequences; 2,608,572,064 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|JH378323.1| Saimiri boliviensis boliviensis unplaced genomic ...    98   5e-19
gb|JH378129.1| Saimiri boliviensis boliviensis unplaced genomic ...    76   2e-12
gb|JH378149.1| Saimiri boliviensis boliviensis unplaced genomic ...    69   3e-10
gb|JH378127.1| Saimiri boliviensis boliviensis unplaced genomic ...    66   2e-09
gb|JH378105.1| Saimiri boliviensis boliviensis unplaced genomic ...    65   3e-09
gb|JH378109.1| Saimiri boliviensis boliviensis unplaced genomic ...    64   9e-09
gb|JH378210.1| Saimiri boliviensis boliviensis unplaced genomic ...    60   1e-07
gb|JH378123.1| Saimiri boliviensis boliviensis unplaced genomic ...    56   2e-06
gb|JH378163.1| Saimiri boliviensis boliviensis unplaced genomic ...    54   1e-05
gb|JH378257.1| Saimiri boliviensis boliviensis unplaced genomic ...    52   3e-05
gb|JH378197.1| Saimiri boliviensis boliviensis unplaced genomic ...    50   1e-04
gb|JH378166.1| Saimiri boliviensis boliviensis unplaced genomic ...    48   6e-04

>gb|JH378323.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00219,
              whole genome shotgun sequence
          Length = 850937

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -1

Query: 243    DPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIPAMM 287
              DPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIPAMM
Sbjct: 114251 DPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIPAMM 114117



 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 45/45 (100%), Positives = 45/45 (100%)
 Frame = -2

Query: 93     SPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSK 137
              SPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSK
Sbjct: 127363 SPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSK 127229



 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 40/41 (97%), Positives = 41/41 (100%)
 Frame = -3

Query: 137    KGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKA 177
              +GYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKA
Sbjct: 123639 RGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKA 123517



 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = -1

Query: 43     IPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFK 80
              IPAGYCFVEFADLATAEKCLHKINGKPLPGATP + F+
Sbjct: 131513 IPAGYCFVEFADLATAEKCLHKINGKPLPGATPVRTFR 131400



 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = -3

Query: 10     LEPYMDENFISRAFATMGETVMSVKIIRNRLTG 42
              LEPYMDENFISRAFATMGETVMSVKIIRNRLTG
Sbjct: 142485 LEPYMDENFISRAFATMGETVMSVKIIRNRLTG 142387


>gb|JH378129.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00025,
                whole genome shotgun sequence
          Length = 25294431

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 54/164 (32%), Positives = 84/164 (51%)
 Frame = +1

Query: 3        ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62
                ASL++GDL   + E+ + R F+  G  V+S++I R++LT    GY +V F  LA A+K L
Sbjct: 16681231 ASLYVGDLHADVTEDLLFRKFSAAGP-VLSIRICRDQLTRRSLGYAYVNFLHLADAQKAL 16681407

Query: 63       HKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPS 122
                  +N   + G    K  +L ++        S   ++F+ +L   +D+  LYE F   +  
Sbjct: 16681408 DTMNFDVIQG----KSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHF-SAFGR 16681572

Query: 123      CRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSK 166
                    KV+ D  G SKGY FV F ++    RA+ E  G +  G K
Sbjct: 16681573 ILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLQGCK 16681701



 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
 Frame = +1

Query: 4        SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
                ++++ +L+  +D   +   F+  G  ++S K++ +       GY FV F + + A++ + 
Sbjct: 16681498 NVFIKNLDKSIDNKTLYEHFSAFGR-ILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIE 16681668

Query: 64       KINGKPLPGATP-AKRFKLNYATYGKQPDNSPEYS-LFVGDLTPDVDDGMLYEFFVKVYP 121
                ++NGK L G      RFK       +    + E++ +++ +   D+DD  L + F K Y 
Sbjct: 16681669 EMNGKLLQGCKVFVGRFKSRQDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSK-YG 16681845

Query: 122      SCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQG 159
                     KV+ D +G SKG+GFV F      K+A+ E  G
Sbjct: 16681846 KTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNG 16681959


>gb|JH378149.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00045,
               whole genome shotgun sequence
          Length = 17462316

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 30/51 (58%), Positives = 40/51 (78%)
 Frame = -3

Query: 234     EEVGDDALEDPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIP 284
               E   +D LEDP   +++ E+N+EF+ +SEELYD+LM+CHWQPLD V SEIP
Sbjct: 2628367 ENQDEDPLEDPHLHVNIEESNQEFIVKSEELYDSLMNCHWQPLDIVYSEIP 2628215


>gb|JH378127.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00023,
                whole genome shotgun sequence
          Length = 26360658

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 28/42 (66%), Positives = 36/42 (85%)
 Frame = +1

Query: 243      DPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIP 284
                DP   +++ E+N+EFM +SEELYD+LM+CHWQPLDTV SEIP
Sbjct: 15724432 DPHLHVNIEESNQEFMVKSEELYDSLMNCHWQPLDTVYSEIP 15724557


>gb|JH378105.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00001,
                whole genome shotgun sequence
          Length = 72162052

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 43/159 (27%), Positives = 81/159 (50%)
 Frame = +1

Query: 1        MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60
                +  SL++GDL P + E  +   F+ +G  + S+++ R+ +TG   GY +V F     A++
Sbjct: 59983264 LMTSLYVGDLHPDVTETMLYDKFSPVGP-IFSIRVCRDMVTGRSLGYAYVNFQQPLDADR 59983440

Query: 61       CLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
                 L+ +N   + G    +  ++ ++        S   ++F+ +L   +D   LY+ F  V+
Sbjct: 59983441 ALNTMNFDVING----RPVRIMWSHRDPSLRKSGVGNIFIKNLDKSIDSKALYDTF-SVF 59983605

Query: 121      PSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQG 159
                 +    K+V D+ G SKGYGFV F  +   + A+ +  G
Sbjct: 59983606 GNILSCKLVCDENG-SKGYGFVHFDTQEAAQSAIEKMNG 59983719



 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 47/156 (30%), Positives = 77/156 (49%)
 Frame = -2

Query: 4       SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
               SL++GDL P + E  +   F+  G  ++S+++ R+ LT   +GY +V F     AE  L 
Sbjct: 6936258 SLYVGDLHPDVTEAMLYEKFSAAGP-ILSIRVCRDVLTRRSSGYAYVNFRHPKDAECALE 6936082

Query: 64      KINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSC 123
                +N   + G    K  ++ ++        S   ++FV +L   V +  LY+  V  +   
Sbjct: 6936081 TMNFDVIKG----KSVRIMWSQRDPSLRRSGVGNIFVKNLDRSVGNKALYDT-VSAFGKI 6935917

Query: 124     RGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQG 159
                  KVV D+ G SKGYGFV F  +   +RA+ +  G
Sbjct: 6935916 LSCKVVCDENG-SKGYGFVHFDTQEAAERAIEKMNG 6935812



 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 7/173 (4%)
 Frame = +1

Query: 14       MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPG- 72
                MD   +   F   G  V+SVK++ +  +G   G+ FV F     A+K + ++NGK L G 
Sbjct: 59983843 MDNERLKDLFGKFGP-VLSVKVMTDA-SGKSRGFGFVNFERHENAQKAVDEMNGKELNGK 59984016

Query: 73       ---ATPAKRFKLNYATYGKQPDNSPEY---SLFVGDLTPDVDDGMLYEFFVKVYPSCRGG 126
                      A+R          + DN   Y   +L+V +L   +DD  L + F   + +    
Sbjct: 59984017 RIYVARAQRKGERQTKLKMKRDNITRYQGVNLYVKNLDDSIDDERLRKEF-SPFGTITSA 59984193

Query: 127      KVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASR 179
                KV++D    SKG+GFV F+   E  +ALT+ +G + L +KP+ +++A  K  R
Sbjct: 59984194 KVMMDGNR-SKGFGFVCFSSPEEATKALTKMKGRI-LDTKPLYVALAQSKEER 59984346



 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 12/178 (6%)
 Frame = -2

Query: 14      MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGA 73
               MD+  +   F   G   +SVK++++  +G   G+ FV F     A+K + ++NGK L G 
Sbjct: 6935688 MDDERLKDLFGKFGPA-LSVKVMKDE-SGKSKGFGFVSFERREDAQKAVDEMNGKELSGK 6935515

Query: 74      T---------PAKRFKLNYATYGKQPDNSPEY---SLFVGDLTPDVDDGMLYEFFVKVYP 121
                           ++ +L       + D    Y   +L+V +L  D+DD  L + F   + 
Sbjct: 6935514 QIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDDIDDERLRKEF-SPFG 6935338

Query: 122     SCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASR 179
               +    KV++   G SKG+GFV F+   E   A+TE  G + + +KP+ +++A  K  R
Sbjct: 6935337 TITSAKVMMGG-GRSKGFGFVCFSSPEEATNAVTEMNGRI-VATKPLYVALAQRKEER 6935170



 Score = 52.4 bits (124), Expect = 3e-05
 Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
 Frame = -2

Query: 46      GYCFVEFADLATAEKCLHKINGKPLPGATP-AKRFKLNYATYGKQPDNSPEYS-LFVGDL 103
               GY FV F     AE+ + K+NG  L        RFK       +    + E++ +++ + 
Sbjct: 6935877 GYGFVHFDTQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNF 6935698

Query: 104     TPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGL 163
                 D+DD  L + F K  P+    KV+ D++G SKG+GFV F    + ++A+ E  G   L
Sbjct: 6935697 GEDMDDERLKDLFGKFGPAL-SVKVMKDESGKSKGFGFVSFERREDAQKAVDEMNGK-EL 6935524

Query: 164     GSKPVRLSVAIPKASR 179
                 K + +  A  K  R
Sbjct: 6935523 SGKQIYVGRAQKKVER 6935476


>gb|JH378109.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00005,
                whole genome shotgun sequence
          Length = 50794693

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
 Frame = +3

Query: 3        ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62
                ASL++G L P + E   +  F+  G  ++S+++ R+R+T    GY +V F   A AE+ L
Sbjct: 16764612 ASLYVGYLHPDVTE---AMKFSPAGP-ILSIRVCRDRITHHSLGYGYVNFQQPADAERAL 16764779

Query: 63       HKIN-----GKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFV 117
                  +N     GKP+P         + ++        S    +F+ +L   +D+  LY+ F 
Sbjct: 16764780 DTMNFDVIKGKPVP---------IMWSQCDPSLRKSGVGDIFIKNLDKSIDNKALYDTF- 16764929

Query: 118      KVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSK 166
                  + +    KVV D+ G SKGYGFV F  +   +RA+ +  G +  G K
Sbjct: 16764930 SAFGNILSCKVVCDENG-SKGYGFVHFERQEAAERAIEKMNGMLLNGHK 16765073


>gb|JH378210.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00106,
               whole genome shotgun sequence
          Length = 7615532

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 46/159 (28%), Positives = 78/159 (49%)
 Frame = -2

Query: 1       MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60
               + A+L++GDL+P + E+ + + F   G  +   +I R+ +T  P GY +V F   A AE 
Sbjct: 2701870 LKAALYVGDLDPDVTEDMLYKKFRPAG-PLRFTRICRDPVTRSPLGYGYVNFRFPADAEW 2701694

Query: 61      CLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
                L+ +N   + G    K F+L ++    +   S   ++F+ +L   +D+  L+  F   +
Sbjct: 2701693 ALNTMNFDLING----KPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAF 2701529

Query: 121     PSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQG 159
                +    KVV D  G SKGY +V F       RA+    G
Sbjct: 2701528 GNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNG 2701415



 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
 Frame = -2

Query: 4       SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
               ++++ +L+  +D   +   F+  G  ++S K++ +       GY +V F  LA A + + 
Sbjct: 2701597 NIFIKNLDKSIDNRALFYLFSAFGN-ILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIW 2701427

Query: 64      KINGKPLPGATP-AKRFKL--NYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
                +NG  L        RFK     A   +  D +   ++FV ++  D+DD  L E F +  
Sbjct: 2701426 HMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYG 2701247

Query: 121     PSCRGGKVVLDQTGVSKGYGFVKF-TDELEQKRAL 154
               P+    KV+ D +G SKG+GFV++ T E  QK  L
Sbjct: 2701246 PT-ESVKVIRDASGKSKGFGFVRYETHEAAQKAVL 2701145


>gb|JH378123.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00019,
               whole genome shotgun sequence
          Length = 29834108

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 43/157 (27%), Positives = 75/157 (47%)
 Frame = +2

Query: 3       ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62
               ASL++GDL P + E  +   F   G  ++S+++ R+ +T    GY  V     A AE   
Sbjct: 6713045 ASLYVGDLHPDVTEAILYEKFGPAG-PILSIRVCRDMITCRSLGYACVNCQQPADAEPAA 6713221

Query: 63      HKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPS 122
               + +N   +      +  ++ +A +      S E  +F+ +L   +D+  LY+ F   + +
Sbjct: 6713222 NAMNFDVIED----EPVRILWAQHDPSLRKSGEGYIFIKNLDRSIDNKALYDTF-SAFGN 6713386

Query: 123     CRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQG 159
                R  KVV D+   SK YG V F  +   +RA+ +  G
Sbjct: 6713387 IRSCKVVCDE-NCSKDYGIVHFEAQEAAERAIEKMNG 6713494



 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 12/178 (6%)
 Frame = +2

Query: 14      MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGA 73
               MD+  +   F   G   +SVK++ +  +G   G+ FV F     A+K + ++NGK L G 
Sbjct: 6713618 MDDEQLKDLFGKFG-LPLSVKVVTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKDLNGK 6713791

Query: 74      T---------PAKRFKLNYATYGKQPDNSPEYS---LFVGDLTPDVDDGMLYEFFVKVYP 121
                           ++ +L         DN+  Y    L+V +L   +DD  L + F   + 
Sbjct: 6713792 LIYVGRAQKKVERQMELKCKFEQMMQDNTTRYHSVHLYVENLDDCIDDERLQKEF-SPFG 6713968

Query: 122     SCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASR 179
               +    KV+++ +G+SKG GFV F+      +A+TE  G + + +KP+ +++A  K  R
Sbjct: 6713969 TVTSAKVMME-SGLSKGVGFVCFSSPEAATKAVTEMNGRI-VATKPLYVTLAQRKGLR 6714136


>gb|JH378163.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00059,
               whole genome shotgun sequence
          Length = 14671897

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 45/144 (31%), Positives = 64/144 (44%)
 Frame = +2

Query: 33      VKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYGKQPDN 92
               +K+ +N+  G    Y F+EFA    A++ L+  N + + G   A R +L          +
Sbjct: 8821166 IKVPQNQ-NGKSKRYAFIEFASFEDAKEALNSCNKREIKGR--AIRLELQGPRESPNARS 8821336

Query: 93      SPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKR 152
                P  +LFV  L+ D  +  L E       S R G V   +TG SKG+GFV F  E E  +
Sbjct: 8821337 QPSKTLFVKGLSEDTTEETLKE---SSDGSVRAGTVTDRETGSSKGFGFVDFNSE-EDAK 8821504

Query: 153     ALTECQGAVGLGSKPVRLSVAIPK 176
               A  E      +    V L  A PK
Sbjct: 8821505 AAKEAMEDDEIDGNKVTLDWAKPK 8821576


>gb|JH378257.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00153,
               whole genome shotgun sequence
          Length = 4070394

 Score = 52.4 bits (124), Expect = 3e-05
 Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
 Frame = +2

Query: 46      GYCFVEF-----ADLATAEKCLHKINGKPLPGATPAKRFKLNYAT-YGKQPDNSPEYSLF 99
               GY FVEF     AD A     + K+ GKP+         ++N A+ + K  D     ++F
Sbjct: 3848789 GYGFVEFLSEEDADYAIKIMNMIKLYGKPI---------RVNKASAHNKNLDVGA--NIF 3848935

Query: 100     VGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQ 158
               +G+L P++D+ +LY+ F       +  K++ D  TG SKGY F+ F    +   A  E  
Sbjct: 3848936 IGNLDPEIDEKLLYDTFSAFGVILQTPKIMQDPDTGNSKGYAFINFA-SFDASDAAIEAM 3849112

Query: 159     GAVGLGSKPVRLSVAIPKASR 179
                   L ++P+ +S A  K S+
Sbjct: 3849113 NGQYLCNRPITVSYAFKKDSK 3849175


>gb|JH378197.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00093,
               whole genome shotgun sequence
          Length = 8899380

 Score = 50.4 bits (119), Expect = 1e-04
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = +2

Query: 90      PDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDEL 148
               P    ++ +F GDL  +V+D +L   F + +PS    KV+ D+ TG +KGYGFV F D  
Sbjct: 6360110 PPTLDDFRIFCGDLGNEVNDDILARAFSR-FPSFLKAKVIRDKRTGKTKGYGFVSFKDPS 6360286

Query: 149     EQKRALTECQGAVG 162
               +  RA+ E  G  G
Sbjct: 6360287 DYVRAMREMNGG*G 6360328


>gb|JH378166.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00062,
                whole genome shotgun sequence
          Length = 14149710

 Score = 47.8 bits (112), Expect = 6e-04
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
 Frame = -2

Query: 30       VMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYGKQ 89
                V++  + ++R+TG   GY FV F     A+  +  +N   L G  P +  K +   + K 
Sbjct: 10133048 VVNTHMPKDRVTGQHQGYGFVGFLSEEDADYAIRIMNMIKLYGK-PIRENKAS--AHNKN 10132878

Query: 90       PDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDEL 148
                 D   +  +F+G+L PD+ + +LY+ F       +  K++ D  TG SKGY F+ F    
Sbjct: 10132877 LDVGAD--IFIGNLDPDIGEKLLYDTFSAFGVILQTPKIMQDPDTGNSKGYAFINFISS- 10132707

Query: 149      EQKRALTECQGAVGLGSKPV 168
                +   A  E      L ++P+
Sbjct: 10132706 DASDAAIEAMNGQYLYNRPI 10132647


  Database: /cursos/BI/genomes/project_2013/Saimiri_boliviensis/genome
  .fa
    Posted date:  Oct 24, 2012  8:25 PM
  Number of letters in database: 2,608,572,064
  Number of sequences in database:  2685
  
Lambda     K      H
   0.317    0.135    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 684,624,980
Number of Sequences: 2685
Number of extensions: 8353208
Number of successful extensions: 22803
Number of sequences better than 1.0e-03: 12
Number of HSP's better than  0.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 21712
Number of HSP's gapped (non-prelim): 4514
length of query: 287
length of database: 869,524,021
effective HSP length: 129
effective length of query: 158
effective length of database: 869,177,656
effective search space: 137330069648
effective search space used: 137330069648
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)