Output_id:  SelK.1.uga_containing
----------  ---------------------
-Species        Saimiri boliviensis                          -Taxid 27679
-Target         /cursos/BI/genomes/project_2013/Saimiri_boliviensis/genome.fa
-Chromosome (-) gi|357434171|gb|JH378192.1|
-Program        genewise
-Query name     gi|87047634|gb|ABD18450.1| MODIFIED selenoprotein K [Sus scrofa]
-Query range    6-91       length:94    coverage: 0.91
-Profile range  18-146     length:153   coverage: 0.84    sec_position: [150]
-Average sequence identity with profile: 0.3498   (ignoring gaps: 0.3907)
-State          kept

------- alignment -------
Query   NGQALDSRSQSPWRLSFITDFFWGIAEFVVLFFRTLLQQDVKKRRGYGGSSDSRYDDGRGPPGNPPRRMGRINHLRGPNPPPMAGG
        |   ||||/|| |||  |||||||||| |||||/|||||||/|   || |||| || | ||||||| |||||||| ||/|| ||||
Target  NEHMLDSRNQSSWRLFLITDFFWGIAECVVLFFKTLLQQDVEKISSYGNSSDSGYDGGSGPPGNPP*RMGRINHLHGPSPPLMAGG
        agcacgacactttatttaagtttgaggtggtttaaccccgggaaaatgattgtgtgggagccgacctaagaaacccgcacccaggg
        aaattaggaaccggttttcattggtcagtttttacttaaataatggagaccacgaaggggccgaccggtggtaatagcgccttcgg
        tacggccatgtagaatgaattcgaatatgtatcatgtggtaaaacctacattcatttatgaaactcaagtacttgtcctttagtta
                                                                          X                   
------- positions -------
Exon 1    1804599      1804856

--------- SECIS ---------
>SelK.1.uga_containing.esecis:str.1 chromosome:gi|357434171|gb|JH378192.1| strand:- positions:1804374-1804478 species:"Saimiri boliviensis" target:/cursos/BI/genomes/project_2013/Saimiri_boliviensis/genome.fa distance_from_sec_uga:None distance_from_cds:120
AAACAAGACU GCUCUGUG UCCUCACAGAUGA AUGAA GUCAUGCUGGG AA UUCCCUCUUCAGGGA ACUAGCCUGAC UGAC UUGCAGUUC CAUACAU GUACAUGUUG
......(((( (((((((( ....))))))..( .(((( ((((.(((((. .. ((((((....))))) )))))).)))) )))) .))))))). ...(((( ....))))..

--------- 3' seq --------
Total sequence length available downstream >= 3000
Sequence until first stop codon: 
TAA
 *