genewise output
Score 341.85 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000024_1.0    1 MERQEESLSARPALETEGLRFLHTT                         
                     MER+EE LSARPALETEGLRFLH T                         
                     MEREEEPLSARPALETEGLRFLHVT          V:V[gtg]       
gi|357434129|-154165 agcgggcctgccgcgaggcctccgaGGTGAGTC  Intron 1       
                     tagaaactccgcctacagtgttatc <1-----[154089:153440   
                     gggaggtgcgggcggcgggccaccc                         


SPP00000024_1.0   26      GSLLATYGWYIVFSCILLYVVFQKLSARLRALRQRQLDRAAAAV 
                          GSLLATYGWYIVFSC+LLYVVFQKLSARLRALRQRQLDRAAAAV 
                          GSLLATYGWYIVFSCLLLYVVFQKLSARLRALRQRQLDRAAAAV 
gi|357434129|-153442 CAGTGgtccgatgttagtatccctggtcactgccagtacaccgaggggg 
                     -1>  gcttccaggatttggtttatttaatccgtgctgagatagcccct 
                          ccggcctcgccccccccccgccggtccgaacgggaggcatgttg 


SPP00000024_1.0   71                           PDVVVKRQEALAAARLKMQEELN 
                                               PDVVVKRQEALAAARLKMQEELN 
                               E:E[gaa]        PDVVVKRQEALAAARLKMQEELN 
gi|357434129|-153305 GGTTAGTG  Intron 2   TAGAAcggggaccggtgggctaacggca 
                      <1-----[153304:15109-1>  catttagaactcccgtataaata 
                                               tttttaaaataattagagaaaat 


SPP00000024_1.0   95 AQVEKHKEKLKQ                       LEEEKRRQKIEMWD 
                     AQVEKHKEKLKQ                       LEEEKRRQKIEMWD 
                     AQVEKHKEKLKQ                       LEEEKRRQKIEMWD 
gi|357434129|-151024 gcggacagacacGTAGCAC  Intron 3   CAGcgggacacaagatg 
                     cataaaaaataa<0-----[150988:15026-0>taaaaggaatatga 
                     tatagtagaaag                       taaaagaggtaggc 


SPP00000024_1.0  121 SMQEGKSYKGNAKKPQ                       EEDSPGPSTS 
                     SMQEGKSYKGNAKKPQ                        EDSPGPSTS 
                     SMQEGKSYKGNAKKPQ                       GEDSPGPSTS 
gi|357434129|-150225 aacggaatagagaaccGTGACTG  Intron 4   CAGgggacgctat 
                     gtaagagaagacaaca<0-----[150177:15008-0>gaagcgcccc 
                     cgaaaatcaataggtg                       gacttgtcta 


SPP00000024_1.0  147 SVL-KRKSDRKPLRGG                          YNPLSGE 
                     SV+ KRKSDRKPLRGG                          YNPLSGE 
                     SVIPKRKSDRKPLRGG          G:G[ggt]        YNPLSGE 
gi|357434129|-150050 tgacacatgaactcggGGTAAGCA  Intron 5   CAGGTtacttgg 
                     cttcagacagactggg <1-----[150001:14843-1>  aactcga 
                     tccgagagcagtggat                          tctgtta 


SPP00000024_1.0  170 GGGACSWRPGRRGPSSGG                                
                     GGG CSWRPGRRGPSSGG                                
                     GGGTCSWRPGRRGPSSGG                                
gi|357434129|-148413 gggatttacgcagcttgg                                
                     gggcgcggcggggcccgg                                
                     atacccgatacacggtca                                


//
Making a V in phase 1 intron
Making a E in phase 1 intron
Making a G in phase 1 intron
>gi|357434129|gb|JH378234.1|:subseq(3007467,304165).pep
MEREEEPLSARPALETEGLRFLHVTVGSLLATYGWYIVFSCLLLYVVFQKLSARLRALRQ
RQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWD
SMQEGKSYKGNAKKPQGEDSPGPSTSSVIPKRKSDRKPLRGGGYNPLSGEGGGTCSWRPG
RRGPSSGG
//
>gi|357434129|gb|JH378234.1|:subseq(3007467,304165).[154165:148358].sp
ATGGAGCGGGAAGAGGAGCCTCTGTCCGCGCGGCCGGCCCTGGAGACCGAGGGGCTGCGC
TTCCTACACGTCACCGTGGGCTCCCTGCTGGCCACCTATGGCTGGTACATCGTCTTCAGC
TGCCTCCTCCTCTACGTGGTCTTCCAGAAGCTTTCCGCCCGGCTAAGAGCCTTGAGGCAG
AGACAGCTGGACAGAGCTGCGGCTGCTGTGGAACCTGATGTTGTTGTTAAACGACAAGAA
GCTTTAGCAGCTGCTCGATTGAAAATGCAAGAAGAACTAAATGCTCAAGTTGAAAAGCAT
AAAGAGAAACTAAAACAGCTTGAAGAAGAAAAACGGAGACAGAAGATTGAAATGTGGGAC
AGCATGCAAGAAGGAAAAAGTTACAAAGGAAATGCAAAGAAGCCTCAGGGGGAAGACAGT
CCTGGGCCTTCCACTTCATCTGTCATCCCGAAACGGAAATCGGACAGAAAGCCTTTGCGG
GGAGGTGGTTATAACCCTTTGTCTGGTGAAGGAGGTGGAACCTGCTCCTGGAGACCTGGA
CGCAGAGGCCCGTCGTCTGGCGGA
//
gi|357434129|gb|JH378234.1|:subseq(3007467,304165)	GeneWise	match	154165	148360	341.85	-	.	gi|357434129|gb|JH378234.1|:subseq(3007467,304165)-genewise-prediction-1
gi|357434129|gb|JH378234.1|:subseq(3007467,304165)	GeneWise	cds	154165	154090	0.00	-	0	gi|357434129|gb|JH378234.1|:subseq(3007467,304165)-genewise-prediction-1
gi|357434129|gb|JH378234.1|:subseq(3007467,304165)	GeneWise	intron	154089	153440	0.00	-	.	gi|357434129|gb|JH378234.1|:subseq(3007467,304165)-genewise-prediction-1
gi|357434129|gb|JH378234.1|:subseq(3007467,304165)	GeneWise	cds	153439	153305	0.00	-	2	gi|357434129|gb|JH378234.1|:subseq(3007467,304165)-genewise-prediction-1
gi|357434129|gb|JH378234.1|:subseq(3007467,304165)	GeneWise	intron	153304	151096	0.00	-	.	gi|357434129|gb|JH378234.1|:subseq(3007467,304165)-genewise-prediction-1
gi|357434129|gb|JH378234.1|:subseq(3007467,304165)	GeneWise	cds	151095	150989	0.00	-	2	gi|357434129|gb|JH378234.1|:subseq(3007467,304165)-genewise-prediction-1
gi|357434129|gb|JH378234.1|:subseq(3007467,304165)	GeneWise	intron	150988	150268	0.00	-	.	gi|357434129|gb|JH378234.1|:subseq(3007467,304165)-genewise-prediction-1
gi|357434129|gb|JH378234.1|:subseq(3007467,304165)	GeneWise	cds	150267	150178	0.00	-	0	gi|357434129|gb|JH378234.1|:subseq(3007467,304165)-genewise-prediction-1
gi|357434129|gb|JH378234.1|:subseq(3007467,304165)	GeneWise	intron	150177	150081	0.00	-	.	gi|357434129|gb|JH378234.1|:subseq(3007467,304165)-genewise-prediction-1
gi|357434129|gb|JH378234.1|:subseq(3007467,304165)	GeneWise	cds	150080	150002	0.00	-	0	gi|357434129|gb|JH378234.1|:subseq(3007467,304165)-genewise-prediction-1
gi|357434129|gb|JH378234.1|:subseq(3007467,304165)	GeneWise	intron	150001	148437	0.00	-	.	gi|357434129|gb|JH378234.1|:subseq(3007467,304165)-genewise-prediction-1
gi|357434129|gb|JH378234.1|:subseq(3007467,304165)	GeneWise	cds	148436	148360	0.00	-	2	gi|357434129|gb|JH378234.1|:subseq(3007467,304165)-genewise-prediction-1
//