Command line: [exonerate -m p2g --showtargetgff -q ./proteins/SPP00000014_1.0.fa -t ./exonerate/SPP00000014_1.0_3_genomic.fa_exonerate.fa]
Hostname: [luke]

C4 Alignment:
------------
         Query: SPP00000014_1.0 # Protein # Selenoprotein H (SelH) # Homo sapiens # Complete
        Target: gi|357434081|gb|JH378282.1|:subseq(741359,300280) Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00178, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 219
   Query range: 21 -> 85
  Target range: 149993 -> 150185

     22 : GluLysLeuAlaAsnGlyGlyGluGlyMetGluGluAlaThrValValIleGluHisC :     41
          :!!||||||!.!|||||||||||||||:!!||||||||||||||||||! !||||||!
          LysLysLeuValAsnGlyGlyGluGlyValGluGluAlaThrValValThrGluHisT
 149994 : AAGAAGCTGGTAAATGGCGGGGAGGGAGTGGAGGAGGCGACCGTTGTTACTGAGCATT : 150051

     42 : ysThrSerUnkArgValTyrGlyArgAsnAlaAlaAlaLeuSerGlnAlaLeuArgLe :     60
           !:!!!!!    !!||||||||||||||||||||||||||||||!:!|||||| !!||
          yrSerArg***CysValTyrGlyArgAsnAlaAlaAlaLeuSerArgAlaLeu***Le
 150052 : ACTCGAGGTGATGCGTCTATGGGCGCAATGCTGCGGCCCTGAGCCGGGCGCTGTGACT : 150108

     61 : uGluAlaProGluLeuProValLysValAsnProThrLysProArgArgGlySerPhe :     79
          ||||!.!|||:!!||||||||||||:!!|||! !.!!|||||||||||||||!:!|||
          uGluValProGlnLeuProValLysMetAsnLeuAlaLysProArgArgGlyAsnPhe
 150109 : GGAGGTCCCACAGCTTCCAGTAAAGATGAACCTGGCCAAACCCCGGAGGGGAAACTTC : 150165

     80 : GluValThrLeuLeuArg :     85
          :!!||||||||||||!:!
          LysValThrLeuLeuGln
 150166 : AAGGTGACGCTGCTGCAG : 150185

vulgar: SPP00000014_1.0 21 85 . gi|357434081|gb|JH378282.1|:subseq(741359,300280) 149993 150185 + 219 M 64 192
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2012-11-14
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
gi|357434081|gb|JH378282.1|:subseq(741359,300280)	exonerate:protein2genome:local	gene	149994	150185	219	+	.	gene_id 1 ; sequence SPP00000014_1.0 ; gene_orientation .
gi|357434081|gb|JH378282.1|:subseq(741359,300280)	exonerate:protein2genome:local	cds	149994	150185	.	+	.	
gi|357434081|gb|JH378282.1|:subseq(741359,300280)	exonerate:protein2genome:local	exon	149994	150185	.	+	.	insertions 0 ; deletions 0
gi|357434081|gb|JH378282.1|:subseq(741359,300280)	exonerate:protein2genome:local	similarity	149994	150185	219	+	.	alignment_id 1 ; Query SPP00000014_1.0 ; Align 149994 22 192
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis