Command line: [exonerate -m p2g --showtargetgff -q ./proteins/SPP00000018_1.0.fa -t ./subsequences/SPP00000018_1.0_1_genomic.fa_exonerate.fa]
Hostname: [luke]

C4 Alignment:
------------
         Query: SPP00000018_1.0 # Protein # Selenoprotein N (SelN) # Homo sapiens # Complete
        Target: gi|357434190|gb|JH378173.1|:subseq(791427,314534) Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00069, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 2568
   Query range: 61 -> 590
  Target range: 164546 -> 149999

     62 : GluLeuAlaLeuLysThrLeuGlyThrAspGlyLeuPheLeuPheSerSerLeuAspT :     81
          |||! !||||||||||||||||||||||||||||||||||||||||||||||||||||
          GluSerAlaLeuLysThrLeuGlyThrAspGlyLeuPheLeuPheSerSerLeuAspT
 164546 : GAATCAGCGCTGAAGACCTTGGGAACAGATGGCCTTTTTCTCTTTTCCTCCTTGGACA : 164489

     82 : hrAspGlyAspMetTyrIleSerProGluGluPheLysProIleAlaGluLysLeuTh :    100
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          hrAspGlyAspMetTyrIleSerProGluGluPheLysProIleAlaGluLysLeuTh
 164488 : CTGACGGGGACATGTACATCAGCCCCGAGGAGTTCAAGCCCATTGCTGAGAAGCTAAC : 164432

    101 : r{G}  >>>> Target Intron 1 >>>>  {ly}SerCysSerValThrGlnThr :    108
          |{|}            853 bp           {||}|||! !!!!|||||||||.!!
          r{G}++                         ++{ly}SerTyrCysValThrGlnAla
 164431 : A{G}gt.........................ag{GG}TCTTATTGTGTCACCCAGGCT : 163555

    109 : GlyValGlnTrpCysSerHisSerSerLeuGlnProGlnLeuProTrpLeuAsnUnkS :    128
          |||! !|||||||||!:!|||||||||||||||||||||!!!! !|||||||||   |
          GlyGlyGlnTrpCysAsnHisSerSerLeuGlnProGlnPheHisTrpLeuAsn***S
 163554 : GGAGGGCAGTGGTGTAATCACAGCTCACTGCAGCCTCAATTTCACTGGCTCAATTGAT : 163495

    129 : erSerCysLeuSerLeuLeu{A}  >>>> Target Intron 2 >>>>  {rg}Se :    136
          ||||||||||||||||||||{|}           3043 bp           {||}||
          erSerCysLeuSerLeuLeu{A}++                         ++{rg}Se
 163494 : CATCCTGCCTCAGTCTCCTG{A}gt.........................ag{GG}TC : 160428

    137 : rThrProAlaAlaSerCysGluGluGluGluLeuProProAspProSerGluGluThr :    155
          |||||||! !||||||! !|||||||||||||||||||||||||||||||||||||||
          rThrProGluAlaSerTyrGluGluGluGluLeuProProAspProSerGluGluThr
 160427 : AACTCCTGAGGCCAGCTACGAGGAGGAGGAGCTGCCCCCTGACCCTAGCGAGGAGACG : 160371

    156 : LeuThrIleGluAlaArgPheGlnProLeuLeuProGluThrMetThrLysSerLysA :    175
          ||||||:!!|||||||||||||||||||||||||||||||||||||||||||||||||
          LeuThrValGluAlaArgPheGlnProLeuLeuProGluThrMetThrLysSerLysA
 160370 : CTCACCGTAGAAGCCCGATTCCAGCCTCTGCTCCCGGAGACCATGACCAAGAGCAAAG : 160311

    176 : spGlyPheLeuGly  >>>> Target Intron 3 >>>>  ValSerArgLeuAla :    184
          ||||||||||||||           3308 bp           ||||||||||||.!!
          spGlyPheLeuGly++                         ++ValSerArgLeuThr
 160310 : ATGGCTTCTTAGGGgt.........................agGTCTCCCGCCTCACC : 156976

    185 : LeuSerGlyLeuArgAsnTrpThrAlaAlaAlaSerProSerAlaValPheAlaThrA :    204
          ||||||||||||||||||||||||.!!||||||||||||!!!||||||||||||.!!|
          LeuSerGlyLeuArgAsnTrpThrThrAlaAlaSerProArgAlaValPheAlaAlaA
 156975 : CTGTCTGGCCTCCGAAACTGGACGACTGCAGCCTCACCGAGGGCAGTGTTTGCCGCCC : 156916

    205 : rgHisPheGlnProPheLeuProProProGlyGlnGluLeuGlyGluProTrpTrpIl :    223
          ||||||||||||||||||||||||||||||||||||||||||||:!!|||||||||||
          rgHisPheGlnProPheLeuProProProGlyGlnGluLeuGlyLysProTrpTrpIl
 156915 : GCCACTTCCAGCCCTTCCTTCCCCCGCCAGGCCAGGAGCTGGGCAAGCCCTGGTGGAT : 156859

    224 : eIleProSerGluLeuSerMetPheThrGlyTyrLeuSerAsnAsnArgPheTyrPro :    242
          |||||||||||||||||||:!:||||||||||||||||||||||||||||||||||||
          eIleProSerGluLeuSerValPheThrGlyTyrLeuSerAsnAsnArgPheTyrPro
 156858 : CATCCCCAGTGAGCTGAGCGTCTTCACTGGCTACCTGTCCAACAACCGCTTCTATCCG : 156802

    243 : ProProProLysGlyLysGlu  >>>> Target Intron 4 >>>>  ValIleIl :    252
          |||||||||||||||||||||            232 bp           ||||||||
          ProProProLysGlyLysGlu++                         ++ValIleIl
 156801 : CCGCCGCCCAAGGGCAAGGAGgt.........................agGTCATCAT : 156540

    253 : eHisArgLeuLeuSerMetPheHisProArgProPheValLysThrArgPheAlaPro :    271
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          eHisArgLeuLeuSerMetPheHisProArgProPheValLysThrArgPheAlaPro
 156539 : CCACCGGCTCCTGAGCATGTTCCACCCAAGGCCCTTCGTGAAGACCCGCTTTGCCCCT : 156483

    272 : GlnGlyAlaValAlaCysLeuThrAlaIleSerAspPheTyrTyrThrValMetPhe{ :    291
          |||||||||||||||||||||||||||:!!|||||||||||||||||||||||||||{
          GlnGlyAlaValAlaCysLeuThrAlaValSerAspPheTyrTyrThrValMetPhe{
 156482 : CAGGGGGCGGTGGCCTGCCTGACTGCCGTCAGTGACTTCTACTACACTGTGATGTTC{ : 156423

    292 : Ar}  >>>> Target Intron 5 >>>>  {g}IleHisAlaGluPheGlnLeuSe :    299
          ||}            518 bp           {|}|||||||||||||||||||||||
          Ar}++                         ++{g}IleHisAlaGluPheGlnLeuSe
 156422 : CG}gt.........................ag{G}ATCCACGCCGAGTTCCAGCTCAG : 155881

    300 : rGluProProAspPheProPheTrpPheSerProAlaGlnPheThrGlyHisIleIle :    318
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          rGluProProAspPheProPheTrpPheSerProAlaGlnPheThrGlyHisIleIle
 155880 : TGAGCCGCCCGACTTCCCCTTCTGGTTCTCCCCTGCCCAGTTCACCGGCCACATCATC : 155824

    319 : LeuSerLysAspAlaThrHisValArgAspPheArgLeuPheValProAsnHis{Ar} :    337
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||{||}
          LeuSerLysAspAlaThrHisValArgAspPheArgLeuPheValProAsnHis{Ar}
 155823 : CTCTCCAAAGATGCCACCCATGTCCGCGACTTCCGGCTCTTCGTCCCCAACCAC{AG} : 155767

    338 :   >>>> Target Intron 6 >>>>  {g}SerLeuAsnValAspMetGluTrpLe :    346
                     1685 bp           {|}||||||||||||||||||||||||||
          ++                         ++{g}SerLeuAsnValAspMetGluTrpLe
 155766 : gt.........................ag{G}TCTCTGAATGTGGACATGGAGTGGCT : 154055

    347 : uTyrGlyAlaSerGluSerSerAsnMetGluValAspIleGlyTyrIleProGln  > :    365
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||   
          uTyrGlyAlaSerGluSerSerAsnMetGluValAspIleGlyTyrIleProGln++ 
 154054 : TTATGGGGCCAGTGAAAGCAGCAACATGGAGGTGGACATTGGCTACATACCCCAGgt. : 153996

    366 : >>> Target Intron 7 >>>>  MetGluLeuGluAlaThrGlyProSerValPr :    375
                   155 bp           ||||||||||||||||||||||||||||||||
                                  ++MetGluLeuGluAlaThrGlyProSerValPr
 153995 : ........................agATGGAGCTGGAGGCCACGGGCCCCTCAGTGCC : 153813

    376 : oSerValIleLeuAspGluAspGlySerMetIleAspSerHisLeuProSerGlyGlu :    394
          ||||:!!|||||||||||||||||||||:!!|||||||||||||||||||||||||||
          oSerMetIleLeuAspGluAspGlySerValIleAspSerHisLeuProSerGlyGlu
 153812 : CTCCATGATCCTGGATGAGGATGGCAGCGTGATTGACAGCCACCTGCCCTCGGGGGAG : 153756

    395 : ProLeuGlnPheValPheGluGluIleLysTrpGlnGlnGluLeuSerTrpGluGluA :    414
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          ProLeuGlnPheValPheGluGluIleLysTrpGlnGlnGluLeuSerTrpGluGluA
 153755 : CCCCTGCAGTTTGTGTTTGAGGAGATCAAGTGGCAGCAGGAGCTGAGCTGGGAGGAGG : 153696

    415 : laAlaArgArgLeuGluValAlaMetTyrProPheLysLys  >>>> Target Int :    428
          |||||||| !!||||||||||||||||||||||||||||||            691 b
          laAlaArgCysLeuGluValAlaMetTyrProPheLysLys++               
 153695 : CCGCCCGCTGCCTGGAGGTGGCCATGTACCCCTTCAAGAAGgt............... : 153652

    429 : ron 8 >>>>  ValSerTyrLeuProPheThrGluAlaPheAspArgAlaLysAlaG :    443
          p           ||||||||||||||||||||||||||||||||||||||||||||||
                    ++ValSerTyrLeuProPheThrGluAlaPheAspArgAlaLysAlaG
 153651 : ..........agGTCTCCTACTTGCCATTCACTGAGGCCTTCGACCGAGCCAAGGCTG : 152918

    444 : luAsnLysLeuValHisSerIleLeuLeuTrpGlyAlaLeuAspAspGlnSerCysUn :    462
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
          luAsnLysLeuValHisSerIleLeuLeuTrpGlyAlaLeuAspAspGlnSerCys**
 152917 : AGAACAAGCTGGTGCATTCGATCCTGTTGTGGGGGGCCCTGGACGACCAGTCCTGCTG : 152861

    463 : k{G}  >>>> Target Intron 9 >>>>  {ly}SerGlyArgThrLeuArgGlu :    470
           {|}           1097 bp           {||}|||||||||||||||||||||
          *{G}++                         ++{ly}SerGlyArgThrLeuArgGlu
 152860 : A{G}gt.........................ag{GT}TCGGGGCGGACTCTCCGGGAG : 151740

    471 : ThrValLeuGluSerSerProIleLeuThrLeuLeuAsnGluSerPheIleSerThrT :    490
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          ThrValLeuGluSerSerProIleLeuThrLeuLeuAsnGluSerPheIleSerThrT
 151739 : ACCGTCCTGGAAAGTTCGCCCATCCTCACCCTGCTCAACGAGAGCTTCATCAGCACCT : 151680

    491 : rpSerLeuValLysGluLeuGluGluLeuGln  >>>> Target Intron 10 >> :    501
          ||||||||||||||||||||||||||||||||             82 bp        
          rpSerLeuValLysGluLeuGluGluLeuGln++                        
 151679 : GGTCCCTGGTGAAGGAGCTGGAAGAGCTGCAGgt........................ : 151645

    502 : >>  AsnAsnGlnGluAsnSerSerHisGlnLysLeuAlaGlyLeuHisLeuGluLys :    518
              !:!|||||||||||| !!:!!|||||||||||||||||||||||||||||||||
            ++SerAsnGlnGluAsnProAlaHisGlnLysLeuAlaGlyLeuHisLeuGluLys
 151644 : ..agAGCAACCAGGAGAACCCGGCCCACCAGAAGCTGGCTGGCCTGCACCTGGAGAAG : 151514

    519 : TyrSerPheProValGluMetMetIleCysLeuProAsnGlyThrVal  >>>> Tar :    535
          ||||||||||||||||||||||||:!!|||||||||||||||||||||          
          TyrSerPheProValGluMetMetValCysLeuProAsnGlyThrVal++        
 151513 : TACAGCTTCCCCGTGGAGATGATGGTCTGCCTGCCCAATGGCACCGTGgt........ : 151461

    536 : get Intron 11 >>>>  ValHisHisIleAsnAlaAsnTyrPheLeuAspIleTh :    547
            1296 bp           ||||||||||||||||||||||||||||||||||||||
                            ++ValHisHisIleAsnAlaAsnTyrPheLeuAspIleTh
 151460 : ..................agGTCCACCACATCAACGCCAACTACTTCTTGGACATCAC : 150131

    548 : rSerValLysProGluGluIleGluSerAsnLeuPheSerPheSerSerThrPheGlu :    566
          ||||:!!||||||||||||||||||||||||||||||||||||||| !!|||||||||
          rSerMetLysProGluGluIleGluSerAsnLeuPheSerPheSerProThrPheGlu
 150130 : CTCCATGAAGCCCGAGGAAATCGAGAGCAATCTCTTCAGCTTCTCACCCACCTTTGAA : 150074

    567 : AspProSerThrAlaThrTyrMetGlnPheLeuLysGluGlyLeuArgArgGlyLeuP :    586
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          AspProSerThrAlaThrTyrMetGlnPheLeuLysGluGlyLeuArgArgGlyLeuP
 150073 : GACCCGTCCACGGCCACCTACATGCAGTTCCTGAAGGAGGGGCTCCGGCGCGGCCTGC : 150014

    587 : roLeuLeuGlnPro :    590
          ||||||||||||||
          roLeuLeuGlnPro
 150013 : CCCTGCTCCAGCCC : 150000

vulgar: SPP00000018_1.0 61 590 . gi|357434190|gb|JH378173.1|:subseq(791427,314534) 164546 149999 - 2568 M 39 117 S 0 1 5 0 2 I 0 849 3 0 2 S 1 2 M 33 99 S 0 1 5 0 2 I 0 3039 3 0 2 S 1 2 M 44 132 5 0 2 I 0 3304 3 0 2 M 70 210 5 0 2 I 0 228 3 0 2 M 41 123 S 0 2 5 0 2 I 0 514 3 0 2 S 1 1 M 45 135 S 0 2 5 0 2 I 0 1681 3 0 2 S 1 1 M 27 81 5 0 2 I 0 151 3 0 2 M 63 189 5 0 2 I 0 687 3 0 2 M 35 105 S 0 1 5 0 2 I 0 1093 3 0 2 S 1 2 M 37 111 5 0 2 I 0 78 3 0 2 M 34 102 5 0 2 I 0 1292 3 0 2 M 56 168
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2012-12-02
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	gene	150000	164546	2568	-	.	gene_id 1 ; sequence SPP00000018_1.0 ; gene_orientation +
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	cds	164429	164546	.	-	.	
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	exon	164429	164546	.	-	.	insertions 0 ; deletions 0
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice5	164427	164428	.	-	.	intron_id 1 ; splice_site "GT"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	intron	163576	164428	.	-	.	intron_id 1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice3	163576	163577	.	-	.	intron_id 0 ; splice_site "AG"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	cds	163474	163575	.	-	.	
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	exon	163474	163575	.	-	.	insertions 0 ; deletions 0
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice5	163472	163473	.	-	.	intron_id 2 ; splice_site "GT"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	intron	160431	163473	.	-	.	intron_id 2
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice3	160431	160432	.	-	.	intron_id 1 ; splice_site "AG"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	cds	160297	160430	.	-	.	
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	exon	160297	160430	.	-	.	insertions 0 ; deletions 0
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice5	160295	160296	.	-	.	intron_id 3 ; splice_site "GT"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	intron	156989	160296	.	-	.	intron_id 3
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice3	156989	156990	.	-	.	intron_id 2 ; splice_site "AG"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	cds	156779	156988	.	-	.	
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	exon	156779	156988	.	-	.	insertions 0 ; deletions 0
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice5	156777	156778	.	-	.	intron_id 4 ; splice_site "GT"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	intron	156547	156778	.	-	.	intron_id 4
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice3	156547	156548	.	-	.	intron_id 3 ; splice_site "AG"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	cds	156422	156546	.	-	.	
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	exon	156422	156546	.	-	.	insertions 0 ; deletions 0
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice5	156420	156421	.	-	.	intron_id 5 ; splice_site "GT"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	intron	155904	156421	.	-	.	intron_id 5
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice3	155904	155905	.	-	.	intron_id 4 ; splice_site "AG"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	cds	155766	155903	.	-	.	
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	exon	155766	155903	.	-	.	insertions 0 ; deletions 0
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice5	155764	155765	.	-	.	intron_id 6 ; splice_site "GT"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	intron	154081	155765	.	-	.	intron_id 6
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice3	154081	154082	.	-	.	intron_id 5 ; splice_site "AG"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	cds	153999	154080	.	-	.	
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	exon	153999	154080	.	-	.	insertions 0 ; deletions 0
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice5	153997	153998	.	-	.	intron_id 7 ; splice_site "GT"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	intron	153844	153998	.	-	.	intron_id 7
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice3	153844	153845	.	-	.	intron_id 6 ; splice_site "AG"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	cds	153655	153843	.	-	.	
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	exon	153655	153843	.	-	.	insertions 0 ; deletions 0
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice5	153653	153654	.	-	.	intron_id 8 ; splice_site "GT"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	intron	152964	153654	.	-	.	intron_id 8
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice3	152964	152965	.	-	.	intron_id 7 ; splice_site "AG"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	cds	152858	152963	.	-	.	
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	exon	152858	152963	.	-	.	insertions 0 ; deletions 0
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice5	152856	152857	.	-	.	intron_id 9 ; splice_site "GT"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	intron	151761	152857	.	-	.	intron_id 9
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice3	151761	151762	.	-	.	intron_id 8 ; splice_site "AG"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	cds	151648	151760	.	-	.	
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	exon	151648	151760	.	-	.	insertions 0 ; deletions 0
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice5	151646	151647	.	-	.	intron_id 10 ; splice_site "GT"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	intron	151566	151647	.	-	.	intron_id 10
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice3	151566	151567	.	-	.	intron_id 9 ; splice_site "AG"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	cds	151464	151565	.	-	.	
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	exon	151464	151565	.	-	.	insertions 0 ; deletions 0
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice5	151462	151463	.	-	.	intron_id 11 ; splice_site "GT"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	intron	150168	151463	.	-	.	intron_id 11
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	splice3	150168	150169	.	-	.	intron_id 10 ; splice_site "AG"
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	cds	150000	150167	.	-	.	
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	exon	150000	150167	.	-	.	insertions 0 ; deletions 0
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	exonerate:protein2genome:local	similarity	150000	164546	2568	-	.	alignment_id 1 ; Query SPP00000018_1.0 ; Align 164547 62 117 ; Align 163574 102 99 ; Align 160429 136 132 ; Align 156989 180 210 ; Align 156547 250 123 ; Align 155903 292 135 ; Align 154080 338 81 ; Align 153844 365 189 ; Align 152964 428 105 ; Align 151759 464 111 ; Align 151566 501 102 ; Align 150168 535 168
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis