genewise output
Score 1031.01 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000018_1.0   62 ELALKTLGTDGLFLFSSLDTDGDMYISPEEFKPIAEKLT           
                     E ALKTLGTDGLFLFSSLDTDGDMYISPEEFKPIAEKLT           
                     ESALKTLGTDGLFLFSSLDTDGDMYISPEEFKPIAEKLT           
gi|357434190|-164546 gtgcaatgaggctcttttgagggataacggtacaggaca           
                     acctactgcagttttcctacagatatgcaatactcaatc           
                     aagggcgaatcttctccgctcgcgccccggcgcttggaa           


SPP00000018_1.0  101                           SCSVTQTGVQWCSHSSLQPQLPW 
                                               S  VTQ G QWC+HSSLQPQ  W 
                               G:G[ggg]        SYCVTQAGGQWCNHSSLQPQFHW 
gi|357434190|-164429 GGTACCAG  Intron 1   CAGGGtttgacgggcttacatcccctct 
                      <1-----[164428:16357-1>  cagtcacggaggaagctacatag 
                                               tttccgtagggttccaggtatcg 


SPP00000018_1.0  125 LNXSSCLSLL                          STPAASCEEEELP 
                     LNXSSCLSLL                          STP AS EEEELP 
                     LNXSSCLSLL          R:R[agg]        STPEASYEEEELP 
gi|357434190|-163504 cattttcaccAGTAACGG  Intron 2   TAGGGtacggatggggcc 
                     tagccgtgtt <1-----[163473:16043-1>  cccacgaaaaatc 
                     ctaaccctcg                          attgcccgggggc 


SPP00000018_1.0  149 PDPSEETLTIEARFQPLLPETMTKSKDGFLG                   
                     PDPSEETLT+EARFQPLLPETMTKSKDGFLG                   
                     PDPSEETLTVEARFQPLLPETMTKSKDGFLG                   
gi|357434190|-160389 cgcaggacagggctcccccgaaaaaaggttg                   
                     cacgaactctacgtacttcactcagaagttg                   
                     tctcgggccaacacgtgcggcgcgcatccag                   


SPP00000018_1.0  180                        VSRLALSGLRNWTAAASPSAVFATRH 
                                            VSRL LSGLRNWT AASP AVFA RH 
                                            VSRLTLSGLRNWTTAASPRAVFAARH 
gi|357434190|-160296 GTGAGCT  Intron 3   CAGgtccactgccataaggtcaggtggcc 
                     <0-----[160296:15698-0>tcgtctcgtgagccccccgcttccga 
                                            cccccgtccacggtacaggagtcccc 


SPP00000018_1.0  206 FQPFLPPPGQELGEPWWIIPSELSMFTGYLSNNRFYPPPPKGKE      
                     FQPFLPPPGQELG+PWWIIPSELS+FTGYLSNNRFYPPPPKGKE      
                     FQPFLPPPGQELGKPWWIIPSELSVFTGYLSNNRFYPPPPKGKE      
gi|357434190|-156910 tcctccccgcgcgacttaacagcagtagtctaacttccccagag      
                     tacttcccgaatgacggttcgatgttcgatcaagtaccccagaa      
                     cgcctcgacgggcgcggccctggccctccgccccctgggcgcgg      


SPP00000018_1.0  250                        VIIHRLLSMFHPRPFVKTRFAPQGAV 
                                            VIIHRLLSMFHPRPFVKTRFAPQGAV 
                                            VIIHRLLSMFHPRPFVKTRFAPQGAV 
gi|357434190|-156778 GTGAGGA  Intron 4   CAGgaaccccaatccactgaactgccggg 
                     <0-----[156778:15654-0>tttagttgttacgcttacgtccagct 
                                            ccccgcgcgccagccggcctctgggg 


SPP00000018_1.0  276 ACLTAISDFYYTVMF                          IHAEFQLS 
                     ACLTA+SDFYYTVMF                          IHAEFQLS 
                     ACLTAVSDFYYTVMF           R:R[cgg]       IHAEFQLS 
gi|357434190|-156468 gtcaggagtttagatCGGTGAGTG  Intron 5   CAGGacggtcca 
                     cgtcctgataacttt  <2-----[156421:15590-2> tacatatg 
                     ccgtcctcccctggc                          cccgcgct 


SPP00000018_1.0  300 EPPDFPFWFSPAQFTGHIILSKDATHVRDFRLFVPNH             
                     EPPDFPFWFSPAQFTGHIILSKDATHVRDFRLFVPNH             
                     EPPDFPFWFSPAQFTGHIILSKDATHVRDFRLFVPNH             
gi|357434190|-155878 gccgtcttttcgctagcaactaggacgcgtcctgcac             
                     accatctgtcccatcgatttcaaccatgatgtttcaa             
                     ggcccccgcctcgccccccccatcctccccgcccccc             


SPP00000018_1.0  337                           SLNVDMEWLYGASESSNMEVDIG 
                                               SLNVDMEWLYGASESSNMEVDIG 
                                R:R[agg]       SLNVDMEWLYGASESSNMEVDIG 
gi|357434190|-155767 AGGTGGGAG  Intron 6   CAGGtcaggagtctggagaaaagggag 
                       <2-----[155765:15408-2> ctatatagtagcgaggatatatg 
                                               tgtgcgggttgctacccgggctc 


SPP00000018_1.0  361 YIPQ                       MELEATGPSVPSVILDEDGSMI 
                     YIPQ                       MELEATGPSVPS+ILDEDGS+I 
                     YIPQ                       MELEATGPSVPSMILDEDGSVI 
gi|357434190|-154010 taccGTGAGTG  Intron 7   CAGagcggagctgctaacggggaga 
                     atca<0-----[153998:15384-0>tataccgcctcctttaaaggtt 
                     cacg                       ggggcgccagccgcgtgtccgt 


SPP00000018_1.0  387 DSHLPSGEPLQFVFEEIKWQQELSWEEAARRLEVAMYPFKK         
                     DSHLPSGEPLQFVFEEIKWQQELSWEEAAR LEVAMYPFKK         
                     DSHLPSGEPLQFVFEEIKWQQELSWEEAARCLEVAMYPFKK         
gi|357434190|-153777 gaccctggccctgtggaatccgcatggggctcgggatctaa         
                     agatccgactatttaatagaaatggaaccggtatctactaa         
                     cccgcgggcggtgtggcggggggcgggccccgggcgcccgg         


SPP00000018_1.0  428                        VSYLPFTEAFDRAKAENKLVHSILLW 
                                            VSYLPFTEAFDRAKAENKLVHSILLW 
                                            VSYLPFTEAFDRAKAENKLVHSILLW 
gi|357434190|-153654 GTGAGGC  Intron 8   CAGgtttctaggtgcgaggaacgctactt 
                     <0-----[153654:15296-0>tcatctcactagcacaaattactttg 
                                            cccgactgcccacgtgcgggtgcggg 


SPP00000018_1.0  454 GALDDQSCX                          SGRTLRETVLESSP 
                     GALDDQSCX                          SGRTLRETVLESSP 
                     GALDDQSCX          G:G[ggt]        SGRTLRETVLESSP 
gi|357434190|-152885 ggcggctttGGTGAGGG  Intron 9   CAGGTtgcaccgagcgatc 
                     gctaaacgg <1-----[152857:15176-1>  cggctgacttagcc 
                     gcgccgcca                          gggtcggccgatgc 


SPP00000018_1.0  478 ILTLLNESFISTWSLVKELEELQ                       NNQ 
                     ILTLLNESFISTWSLVKELEELQ                       +NQ 
                     ILTLLNESFISTWSLVKELEELQ                       SNQ 
gi|357434190|-151716 acaccagataaattcgagcggccGTGAGTG  Intron 10  CAGaac 
                     ttcttaagttgcgcttaataata<0-----[151647:15156-0>gaa 
                     cccgccgcccccgcgggggaggg                       ccg 


SPP00000018_1.0  504 ENSSHQKLAGLHLEKYSFPVEMMICLPNGTV                   
                     EN +HQKLAGLHLEKYSFPVEMM+CLPNGTV                   
                     ENPAHQKLAGLHLEKYSFPVEMMVCLPNGTV                   
gi|357434190|-151556 gacgccacggcccgatatcggaagtccagag                   
                     aaccaaatcgtataaagtctatttgtcagct                   
                     gcgccgggtcgcgggccccggggccgctccg                   


SPP00000018_1.0  535                        VHHINANYFLDITSVKPEEIESNLFS 
                                            VHHINANYFLDITS+KPEEIESNLFS 
                                            VHHINANYFLDITSMKPEEIESNLFS 
gi|357434190|-151463 GTAGGCA  Intron 11  CAGgccaagatttgaataacggagaacta 
                     <0-----[151463:15016-0>taatacaattatcctacaatagattg 
                                            cccccccccgccccggcgacgctccc 


SPP00000018_1.0  561 FSSTFEDPSTATYMQFLKEGLRRGLPLLQP                    
                     FS TFEDPSTATYMQFLKEGLRRGLPLLQP                    
                     FSPTFEDPSTATYMQFLKEGLRRGLPLLQP                    
gi|357434190|-150089 ttcatggctagatactcaggcccgcccccc                    
                     tccctaacccccatattaagtgggtcttac                    
                     cacctacgcgcccggcggggcgccgcgcgc                    


//
Making a G in phase 1 intron
Making a R in phase 1 intron
Making a R in phase 2 intron
Making a R in phase 2 intron
Making a G in phase 1 intron
>gi|357434190|gb|JH378173.1|:subseq(791427,314534).pep
ESALKTLGTDGLFLFSSLDTDGDMYISPEEFKPIAEKLTGSYCVTQAGGQWCNHSSLQPQ
FHWLNXSSCLSLLRSTPEASYEEEELPPDPSEETLTVEARFQPLLPETMTKSKDGFLGVS
RLTLSGLRNWTTAASPRAVFAARHFQPFLPPPGQELGKPWWIIPSELSVFTGYLSNNRFY
PPPPKGKEVIIHRLLSMFHPRPFVKTRFAPQGAVACLTAVSDFYYTVMFRIHAEFQLSEP
PDFPFWFSPAQFTGHIILSKDATHVRDFRLFVPNHRSLNVDMEWLYGASESSNMEVDIGY
IPQMELEATGPSVPSMILDEDGSVIDSHLPSGEPLQFVFEEIKWQQELSWEEAARCLEVA
MYPFKKVSYLPFTEAFDRAKAENKLVHSILLWGALDDQSCXGSGRTLRETVLESSPILTL
LNESFISTWSLVKELEELQSNQENPAHQKLAGLHLEKYSFPVEMMVCLPNGTVVHHINAN
YFLDITSMKPEEIESNLFSFSPTFEDPSTATYMQFLKEGLRRGLPLLQP
//
>gi|357434190|gb|JH378173.1|:subseq(791427,314534).[164546:149998].sp
GAATCAGCGCTGAAGACCTTGGGAACAGATGGCCTTTTTCTCTTTTCCTCCTTGGACACT
GACGGGGACATGTACATCAGCCCCGAGGAGTTCAAGCCCATTGCTGAGAAGCTAACAGGG
TCTTATTGTGTCACCCAGGCTGGAGGGCAGTGGTGTAATCACAGCTCACTGCAGCCTCAA
TTTCACTGGCTCAATTGATCATCCTGCCTCAGTCTCCTGAGGTCAACTCCTGAGGCCAGC
TACGAGGAGGAGGAGCTGCCCCCTGACCCTAGCGAGGAGACGCTCACCGTAGAAGCCCGA
TTCCAGCCTCTGCTCCCGGAGACCATGACCAAGAGCAAAGATGGCTTCTTAGGGGTCTCC
CGCCTCACCCTGTCTGGCCTCCGAAACTGGACGACTGCAGCCTCACCGAGGGCAGTGTTT
GCCGCCCGCCACTTCCAGCCCTTCCTTCCCCCGCCAGGCCAGGAGCTGGGCAAGCCCTGG
TGGATCATCCCCAGTGAGCTGAGCGTCTTCACTGGCTACCTGTCCAACAACCGCTTCTAT
CCGCCGCCGCCCAAGGGCAAGGAGGTCATCATCCACCGGCTCCTGAGCATGTTCCACCCA
AGGCCCTTCGTGAAGACCCGCTTTGCCCCTCAGGGGGCGGTGGCCTGCCTGACTGCCGTC
AGTGACTTCTACTACACTGTGATGTTCCGGATCCACGCCGAGTTCCAGCTCAGTGAGCCG
CCCGACTTCCCCTTCTGGTTCTCCCCTGCCCAGTTCACCGGCCACATCATCCTCTCCAAA
GATGCCACCCATGTCCGCGACTTCCGGCTCTTCGTCCCCAACCACAGGTCTCTGAATGTG
GACATGGAGTGGCTTTATGGGGCCAGTGAAAGCAGCAACATGGAGGTGGACATTGGCTAC
ATACCCCAGATGGAGCTGGAGGCCACGGGCCCCTCAGTGCCCTCCATGATCCTGGATGAG
GATGGCAGCGTGATTGACAGCCACCTGCCCTCGGGGGAGCCCCTGCAGTTTGTGTTTGAG
GAGATCAAGTGGCAGCAGGAGCTGAGCTGGGAGGAGGCCGCCCGCTGCCTGGAGGTGGCC
ATGTACCCCTTCAAGAAGGTCTCCTACTTGCCATTCACTGAGGCCTTCGACCGAGCCAAG
GCTGAGAACAAGCTGGTGCATTCGATCCTGTTGTGGGGGGCCCTGGACGACCAGTCCTGC
TGAGGTTCGGGGCGGACTCTCCGGGAGACCGTCCTGGAAAGTTCGCCCATCCTCACCCTG
CTCAACGAGAGCTTCATCAGCACCTGGTCCCTGGTGAAGGAGCTGGAAGAGCTGCAGAGC
AACCAGGAGAACCCGGCCCACCAGAAGCTGGCTGGCCTGCACCTGGAGAAGTACAGCTTC
CCCGTGGAGATGATGGTCTGCCTGCCCAATGGCACCGTGGTCCACCACATCAACGCCAAC
TACTTCTTGGACATCACCTCCATGAAGCCCGAGGAAATCGAGAGCAATCTCTTCAGCTTC
TCACCCACCTTTGAAGACCCGTCCACGGCCACCTACATGCAGTTCCTGAAGGAGGGGCTC
CGGCGCGGCCTGCCCCTGCTCCAGCCC
//
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	match	164546	150000	1031.01	-	.	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	cds	164546	164429	0.00	-	0	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	intron	164428	163576	0.00	-	.	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	cds	163575	163474	0.00	-	2	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	intron	163473	160431	0.00	-	.	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	cds	160430	160297	0.00	-	2	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	intron	160296	156989	0.00	-	.	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	cds	156988	156779	0.00	-	0	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	intron	156778	156547	0.00	-	.	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	cds	156546	156422	0.00	-	0	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	intron	156421	155904	0.00	-	.	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	cds	155903	155766	0.00	-	1	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	intron	155765	154081	0.00	-	.	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	cds	154080	153999	0.00	-	1	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	intron	153998	153844	0.00	-	.	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	cds	153843	153655	0.00	-	0	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	intron	153654	152964	0.00	-	.	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	cds	152963	152858	0.00	-	0	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	intron	152857	151761	0.00	-	.	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	cds	151760	151648	0.00	-	2	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	intron	151647	151566	0.00	-	.	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	cds	151565	151464	0.00	-	0	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	intron	151463	150168	0.00	-	.	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
gi|357434190|gb|JH378173.1|:subseq(791427,314534)	GeneWise	cds	150167	150000	0.00	-	0	gi|357434190|gb|JH378173.1|:subseq(791427,314534)-genewise-prediction-1
//