TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000033_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Homo sapiens # Complete
         (448 letters)

Database: /cursos/BI/genomes/project_2013/Saimiri_boliviensis/genome.f
a 
           2685 sequences; 2,608,572,064 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|JH378141.1| Saimiri boliviensis boliviensis unplaced genomic ...   724   0.0  
gb|JH378183.1| Saimiri boliviensis boliviensis unplaced genomic ...   508   e-142
gb|JH378160.1| Saimiri boliviensis boliviensis unplaced genomic ...   295   e-105
gb|JH378111.1| Saimiri boliviensis boliviensis unplaced genomic ...   342   3e-92
gb|JH378112.1| Saimiri boliviensis boliviensis unplaced genomic ...   291   5e-77
gb|JH378155.1| Saimiri boliviensis boliviensis unplaced genomic ...   288   3e-76
gb|JH378126.1| Saimiri boliviensis boliviensis unplaced genomic ...   119   3e-25
gb|JH378150.1| Saimiri boliviensis boliviensis unplaced genomic ...    94   4e-25
gb|JH378144.1| Saimiri boliviensis boliviensis unplaced genomic ...   114   1e-23

>gb|JH378141.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00037,
                whole genome shotgun sequence
          Length = 19344684

 Score =  724 bits (1869), Expect = 0.0
 Identities = 368/413 (89%), Positives = 371/413 (89%)
 Frame = +1

Query: 26       LTLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKGXGCKVPQEALLKLLAGLTRPDVRPPL 85
                LTLGR+FSNYRPFEPQALGLS SWRLTGFSGMKG GCKVPQE LLKLLAGLTRPDVRPPL
Sbjct: 10046806 LTLGRNFSNYRPFEPQALGLSASWRLTGFSGMKG*GCKVPQETLLKLLAGLTRPDVRPPL 10046985

Query: 86       GRGLVGGQEEASQEAGLPAGAGPSPTFPALGIGMDSCVIPLRHGGLSLVQTTDFFYPLVE 145
                G GL GGQEEASQE G    AGPSPTFPALGIGMDSCVIPLRHGGLSLVQTTDFFYPLVE
Sbjct: 10046986 GGGLEGGQEEASQETG----AGPSPTFPALGIGMDSCVIPLRHGGLSLVQTTDFFYPLVE 10047153

Query: 146      DPYMMGRIACANVLSDLYAMGITECDNXXXXXXXXXXXXXXXREKVTPLMVKGFRDXXXX 205
                DPYMMGRIACANVLSDLYAMGITECDN               REKVTPLMVKGFRD    
Sbjct: 10047154 DPYMMGRIACANVLSDLYAMGITECDNMLMLLSVSQSMSEEEREKVTPLMVKGFRDAAEE 10047333

Query: 206      XXXXXXXXXXXXNPWIIIGGVATVVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVNAHQW 265
                            NPWIIIGGVATVVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVNAHQW
Sbjct: 10047334 GGTAVTGGQTVVNPWIIIGGVATVVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVNAHQW 10047513

Query: 266      LDNPERWNKVKMVVSREEVELAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGILGH 325
                LDNPERWNKVKMV+SREEVELAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGILGH
Sbjct: 10047514 LDNPERWNKVKMVISREEVELAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGILGH 10047693

Query: 326      SQNLAKQQRNEVSFVIHNLPIIAKMAAVSKASGRFGLLQGTSAETSGGLLICLPREQAAR 385
                SQNLAKQQRNEVSFVIHNLPIIAKMAAVSKASGRFGLL+GTSAETSGGLLICLPREQAAR
Sbjct: 10047694 SQNLAKQQRNEVSFVIHNLPIIAKMAAVSKASGRFGLLRGTSAETSGGLLICLPREQAAR 10047873

Query: 386      FCSEIKSSKYGEGHQAWIVGIVEKGNRTARIIDKPRVIEVLPRGATAAVLAPD 438
                FCSEIKSSKYGEGHQAWIVGIVEKGNRTARIIDKPRVIEVLPRGATAA LAPD
Sbjct: 10047874 FCSEIKSSKYGEGHQAWIVGIVEKGNRTARIIDKPRVIEVLPRGATAAALAPD 10048032


>gb|JH378183.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00079,
               whole genome shotgun sequence
          Length = 10412959

 Score =  508 bits (1309), Expect = e-142
 Identities = 264/406 (65%), Positives = 300/406 (73%), Gaps = 1/406 (0%)
 Frame = +3

Query: 30      RSFSNYRPFEPQALGLSPSWRLTGFSGMKGXGCKVPQEALLKLLAGLTRPDVRPPLGRGL 89
               R+ S +  F P++  L  S+RLT F+ +KG GCKVPQ+ L KLL  L             
Sbjct: 6916608 RTMSTWESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESL------------- 6916748

Query: 90      VGGQEEASQEAGLPAGAGPSPTFPALGIGMDSCVIPLRHGGLSLVQTTDFFYPLVEDPYM 149
                  QE   QE     GA      P LGIGMD+ VIPLRH GLSLVQTTD+ YP+V+DPYM
Sbjct: 6916749 ---QENHFQEDEQFLGA----ITPRLGIGMDTYVIPLRHSGLSLVQTTDYIYPIVDDPYM 6916907

Query: 150     MGRIACANVLSDLYAMGITECDNXXXXXXXXXXXXXXXREKVTPLMVKGFRDXXXXXXXX 209
               MGRIAC NVLSDLYAM +TECDN               R KV PL+++GF+D        
Sbjct: 6916908 MGRIACTNVLSDLYAMRVTECDNMLMLLGVSNKMTDRERNKVMPLIIQGFKDAAEEAGTS 6917087

Query: 210     XXXXXXXXNPWIIIGGVATVVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVNAHQWLDNP 269
                       NPWI++GGVAT VCQPNEFIMP++AV GDVLVLTKPLGTQVAV  HQWLD P
Sbjct: 6917088 VTGGQTVLNPWIVLGGVATTVCQPNEFIMPNNAVPGDVLVLTKPLGTQVAVAVHQWLDIP 6917267

Query: 270     ERWNKVKMVVSREEVELAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGILGHSQNL 329
               E+ NK+K+VV++E+VELAYQEAM NM  LNRTAAGLMHTFNAHAATDITGFGILGH QNL
Sbjct: 6917268 EKLNKIKLVVTQEDVELAYQEAMMNMLRLNRTAAGLMHTFNAHAATDITGFGILGHVQNL 6917447

Query: 330     AKQQRNEVSFVIHNLPIIAKMAAVSKASGR-FGLLQGTSAETSGGLLICLPREQAARFCS 388
               AKQQRNEVSF+IHNLP++AKMAAVSKA G  FGL+ GT  ETSGGLLICLPREQAARFC+
Sbjct: 6917448 AKQQRNEVSFIIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCA 6917627

Query: 389     EIKSSKYGEGHQAWIVGIVEKGNRTARIIDKPRVIEVLPRGATAAV 434
               EIKS KYGEGHQAWI+GIVEKGNRTA+IIDKPR+IEV P+ AT  V
Sbjct: 6917628 EIKSPKYGEGHQAWIIGIVEKGNRTAKIIDKPRIIEVAPQVATQNV 6917765


>gb|JH378160.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00056,
               whole genome shotgun sequence
          Length = 15574059

 Score =  295 bits (756), Expect(2) = e-105
 Identities = 174/283 (61%), Positives = 188/283 (66%), Gaps = 6/283 (2%)
 Frame = +2

Query: 99      EAGLPAGAGPSPTFPALGIGMDSCVIPLRHGGLSLVQTTDFF------YPLVEDPYMMGR 152
               E   P  +GP+P    L          LR GGLSLV+T DFF          E P   G 
Sbjct: 5901818 ERAQPRFSGPAPRDGLLRHA-------LRRGGLSLVRTMDFFDGAPSWCQRAE*PLRHGP 5901976

Query: 153     IACANVLSDLYAMGITECDNXXXXXXXXXXXXXXXREKVTPLMVKGFRDXXXXXXXXXXX 212
                 C  ++    +  ++E +                REKVTPLMVKGFRD           
Sbjct: 5901977 -DCGMLMLLSVSQSVSEEE----------------REKVTPLMVKGFRDVAEEGGPAVTG 5902105

Query: 213     XXXXXNPWIIIGGVATVVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVNAHQWLDNPERW 272
                    +PWI IGG A VV QPNEFIMP SAVVG  L +TKPLGTQVAVNAHQWLDNPER 
Sbjct: 5902106 GQTVGHPWIRIGGAAIVVGQPNEFIMPHSAVVGGALAVTKPLGTQVAVNAHQWLDNPERR 5902285

Query: 273     NKVKMVVSREEVELAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGILGHSQNLAKQ 332
               NKVKMVVS E+VELAYQEAMFNMATLNR AAGLMH FNAHAATDITG GILGHS NLAKQ
Sbjct: 5902286 NKVKMVVSGEQVELAYQEAMFNMATLNRAAAGLMHAFNAHAATDITGLGILGHS*NLAKQ 5902465

Query: 333     QRNEVSFVIHNLPIIAKMAAVSKASGRFGLLQGTSAETSGGLL 375
               QRNEVSFVIHNLPIIAKMA VSKASG+FGL QGTSAETSGGL+
Sbjct: 5902466 QRNEVSFVIHNLPIIAKMAVVSKASGQFGLPQGTSAETSGGLI 5902594



 Score =  110 bits (276), Expect(2) = e-105
 Identities = 55/65 (84%), Positives = 58/65 (89%)
 Frame = +3

Query: 374     LLICLPREQAARFCSEIKSSKYGEGHQAWIVGIVEKGNRTARIIDKPRVIEVLPRGATAA 433
               LLICLP EQAARFC EIKSSKY E HQAWIVGIVEKG++TARIIDKP VIEVLPRG+TAA
Sbjct: 5902593 LLICLPGEQAARFCFEIKSSKYRESHQAWIVGIVEKGSQTARIIDKP*VIEVLPRGSTAA 5902772

Query: 434     VLAPD 438
                L PD
Sbjct: 5902773 ALPPD 5902787



 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 49/87 (56%), Positives = 53/87 (60%)
 Frame = +1

Query: 26      LTLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKGXGCKVPQEALLKLLAGLTRPDVRPPL 85
               LTLGRS S+YRP EPQALGL  SWR +GFS MKG GCKVPQE  L+LLA           
Sbjct: 5901640 LTLGRSVSHYRPLEPQALGLRRSWRPSGFSCMKG*GCKVPQETPLRLLA----------- 5901786

Query: 86      GRGLVGGQEEASQEAGLPAGAGPSPTF 112
                    GG E AS E     GAGP+P F
Sbjct: 5901787 -----GGPEVASPE----TGAGPAPLF 5901840


>gb|JH378111.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00007,
                whole genome shotgun sequence
          Length = 46157118

 Score =  342 bits (877), Expect = 3e-92
 Identities = 169/248 (68%), Positives = 195/248 (78%), Gaps = 1/248 (0%)
 Frame = +3

Query: 188      REKVTPLMVKGFRDXXXXXXXXXXXXXXXXNPWIIIGGVATVVCQPNEFIMPDSAVVGDV 247
                R KV PL+++GF+D                NPWI++GG  T VCQPNEFIMPD+AV GDV
Sbjct: 39824001 RNKVMPLIIQGFKDTAEEAGTSVTGSQTVLNPWIVLGGATTTVCQPNEFIMPDNAVSGDV 39824180

Query: 248      LVLTKPLGTQVAVNAHQWLDNPERWNKVKMVVSREEVELAYQEAMFNMATLNRTAAGLMH 307
                LVLTKPLG +VAV  HQWLD PE+WNK+K+VV++E+ ELAYQEAM NMA LNRTAA LMH
Sbjct: 39824181 LVLTKPLGIRVAVAVHQWLDIPEKWNKIKLVVTQEDTELAYQEAMMNMARLNRTAAELMH 39824360

Query: 308      TFNAHAATDITGFGILGHSQNLAKQQRNEVSFVIHNLPIIAKMAAVSKA-SGRFGLLQGT 366
                TFN HAATDI GFGI GH+QNLAKQ+RN+V FVIHNLP+ AK AAVSKA    FGL+ GT
Sbjct: 39824361 TFNVHAATDIMGFGIWGHAQNLAKQRRNKVLFVIHNLPVWAKTAAVSKACRNMFGLMHGT 39824540

Query: 367      SAETSGGLLICLPREQAARFCSEIKSSKYGEGHQAWIVGIVEKGNRTARIIDKPRVIEVL 426
                  ET GGLLICL REQAARFC+ IKS KYGEGHQAWI+GI +KGN TA+IIDKPR++EV 
Sbjct: 39824541 CQET*GGLLICLSREQAARFCAVIKSPKYGEGHQAWIIGIADKGNCTAKIIDKPRIVEVA 39824720

Query: 427      PRGATAAV 434
                P+ AT  V
Sbjct: 39824721 PQVATQNV 39824744


>gb|JH378112.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00008,
                whole genome shotgun sequence
          Length = 45331107

 Score =  291 bits (745), Expect = 5e-77
 Identities = 147/164 (89%), Positives = 153/164 (93%)
 Frame = -2

Query: 275      VKMVVSREEVELAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGILGHSQNLAKQQR 334
                +KMVVSREEVELAYQEAMF MATLNRTAAGLMH FNAHAATDITG GI GHSQNL KQQR
Sbjct: 26374139 IKMVVSREEVELAYQEAMFRMATLNRTAAGLMHAFNAHAATDITGLGIPGHSQNLTKQQR 26373960

Query: 335      NEVSFVIHNLPIIAKMAAVSKASGRFGLLQGTSAETSGGLLICLPREQAARFCSEIKSSK 394
                NE+SFVIHNLPIIAK+AA SKASG+FGLLQGTSAETSGGLLICLPREQAARFCS+ KSSK
Sbjct: 26373959 NELSFVIHNLPIIAKVAAFSKASGQFGLLQGTSAETSGGLLICLPREQAARFCSKTKSSK 26373780

Query: 395      YGEGHQAWIVGIVEKGNRTARIIDKPRVIEVLPRGATAAVLAPD 438
                YGE HQ WIVGIVEKGNRTARIIDKPRVIE+LP GATAA LAPD
Sbjct: 26373779 YGESHQVWIVGIVEKGNRTARIIDKPRVIELLPCGATAAALAPD 26373648



 Score =  172 bits (437), Expect = 3e-41
 Identities = 115/259 (44%), Positives = 125/259 (48%), Gaps = 11/259 (4%)
 Frame = -3

Query: 26       LTLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKGXGCKVPQEALLKLLAGLTRPDVRPPL 85
                LTLG SFS  RPFEPQALGLSP+W+LTGFSG KG GCKVPQE LL LLAGLTRP    P 
Sbjct: 26374870 LTLGPSFSKSRPFEPQALGLSPAWQLTGFSGKKG*GCKVPQETLLTLLAGLTRPAWGGPY 26374691

Query: 86       GRGLVGGQEEASQEAGLPAGAGPSPTFPALGIGMDSCVIPLRHGGLSLVQTTDFFYPLVE 145
                  G   G  E        A   P+P F     G      P   G     +    F P  +
Sbjct: 26374690 WAGAWWGVRERRPRKPERA---PAPLFQPWASGWTPASSP*GTGACRWCRPRTSFTPWWK 26374520

Query: 146      DPYMMGRIACANVLSDLYAMGITECDNXXXXXXXXXXXXXXXREKVTPLMVKGFRDXXXX 205
                 P       C      L   G                      EKVTP MVKGFRD    
Sbjct: 26374519 IPT*WAHSWCQRA-E*LLRHGHY*V*QRVDVTQRRPEDE*GGTEKVTPFMVKGFRDSAEE 26374343

Query: 206      XXXXXXXXXXXXNPWIIIGGVATVVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVNAH-- 263
                            NPW++IGG AT  CQPNEFIMPDSAV G VLVLT PLGTQVAVNAH  
Sbjct: 26374342 GGTAVTGAQTVLNPWVLIGGGATAKCQPNEFIMPDSAVAGVVLVLTNPLGTQVAVNAHRM 26374163

Query: 264      ---------QWLDNPERWN 273
                         +W    +RW+
Sbjct: 26374162 AG*S*KME*RWWSPEKRWS 26374106


>gb|JH378155.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00051,
               whole genome shotgun sequence
          Length = 16417988

 Score =  288 bits (738), Expect = 3e-76
 Identities = 148/184 (80%), Positives = 159/184 (86%)
 Frame = -3

Query: 252     KPLGTQVAVNAHQWLDNPERWNKVKMVVSREEVELAYQEAMFNMATLNRTAAGLMHTFNA 311
               KPLGTQVAVNAHQWLDNPER  +VK+VVS E VELAYQEAM NMATL +TAAGLMHT NA
Sbjct: 1347510 KPLGTQVAVNAHQWLDNPERGKEVKLVVSGE*VELAYQEAMLNMATLIQTAAGLMHTVNA 1347331

Query: 312     HAATDITGFGILGHSQNLAKQQRNEVSFVIHNLPIIAKMAAVSKASGRFGLLQGTSAETS 371
               HAAT ITGFGI GHSQNLAKQQRN+VSFV HNLP+IAKMAA+SK SG+F LLQGTSAETS
Sbjct: 1347330 HAATGITGFGIPGHSQNLAKQQRNDVSFVTHNLPVIAKMAAISKTSGQF*LLQGTSAETS 1347151

Query: 372     GGLLICLPREQAARFCSEIKSSKYGEGHQAWIVGIVEKGNRTARIIDKPRVIEVLPRGAT 431
                GLLICLP+E    FCSEI+SSKY EGHQ WI GIVEKGN+TA +IDKP VIEVLP  AT
Sbjct: 1347150 RGLLICLPKE*VDHFCSEIRSSKYREGHQGWIAGIVEKGNQTAWVIDKPGVIEVLPHVAT 1346971

Query: 432     AAVL 435
               AA L
Sbjct: 1346970 AAAL 1346959



 Score =  102 bits (255), Expect = 3e-20
 Identities = 69/145 (47%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
 Frame = -3

Query: 27      TLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKGXGCKVPQEALLKLLAGLTRPDVRPPLG 86
               +LGR+FS+ + F+PQA GLS SW LT  + + G           +  A  T     P   
Sbjct: 1348119 SLGRAFSSSQSFQPQAWGLSLSW*LT--ASLAG-----------RTEAARTCRRHYPNSW 1347979

Query: 87      RGLVGGQEEASQEAGLPA--GAGPSPTFPALGIGMDSCVIPLRHGGLSLVQTTDFFYPLV 144
               R   G     +     P   G GP P+  A GIGMDSCVIPLRH  LS VQTTDFFY L+
Sbjct: 1347978 RA*HGPHPAGTSCPRSPPTRGGGPWPSPSAQGIGMDSCVIPLRHEDLSQVQTTDFFYSLM 1347799

Query: 145     EDPYMMGRIACANVLSDLYAMGITE 169
               ED YMMG  ACA VL DL+AM I E
Sbjct: 1347798 EDSYMMGCTACAKVLRDLWAMVIAE 1347724


>gb|JH378126.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00022,
                whole genome shotgun sequence
          Length = 27210278

 Score =  119 bits (298), Expect = 3e-25
 Identities = 70/143 (48%), Positives = 83/143 (58%)
 Frame = -1

Query: 58       KGXGCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPALGI 117
                +G G KVPQ+ L KLL  L                 E   QE     GA      P LGI
Sbjct: 10876220 EGAGGKVPQDVLQKLLESL*----------------EHHFQEDEQFLGA----VMPRLGI 10876101

Query: 118      GMDSCVIPLRHGGLSLVQTTDFFYPLVEDPYMMGRIACANVLSDLYAMGITECDNXXXXX 177
                GMD  VIPLR GGLSLVQTTD+ Y +V+DPY+MGRIACANVLSDLY MG+TECDN     
Sbjct: 10876100 GMDKSVIPLRQGGLSLVQTTDYNYLIVDDPYVMGRIACANVLSDLYVMGVTECDNMLKLL 10875921

Query: 178      XXXXXXXXXXREKVTPLMVKGFR 200
                          R++V PL+++GF+
Sbjct: 10875920 GVSNKMTDRERDEVMPLIIQGFQ 10875852


>gb|JH378150.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00046,
               whole genome shotgun sequence
          Length = 17239664

 Score = 94.0 bits (232), Expect(2) = 4e-25
 Identities = 73/211 (34%), Positives = 103/211 (48%), Gaps = 9/211 (4%)
 Frame = -2

Query: 188     REKVTPLMVKGFRDXXXXXXXXXXXXXXXXNPWIIIGGVATVVCQPNEFIMPDSAVVGDV 247
               R+KV  L+++GF+D                N WI++G V T   Q        SA  G  
Sbjct: 3191635 RDKVMLLIIQGFKDIAEEAGVSVMSGQT*-NSWIVLGAVTTTTAQ*MYHARQFSAK-GCP 3191462

Query: 248     LVLTKPLG-------TQVAVNAHQWLDNPERWNKVKMVVSREEVELAYQEAMFNMATLNR 300
                V   P G       T V     QWLD+PE+ NK+K+VV+ E VELA  +A+ NM   NR
Sbjct: 3191461 GVCKTPGGHKW*GLCTTVTCVK*QWLDSPEK*NKIKLVVTHEAVELA*HKAIMNMVQFNR 3191282

Query: 301     TAAGLMHTFNAHAATD-ITGFGILGHSQNLAKQQRNEVSFVIHNLPIIAKMAAVSKASGR 359
                A+    +      T    GFG +  +   ++     + F    +P++AKMA +SKA G 
Sbjct: 3191281 KASSCTQSVPMQPRTSWALGFGAMYRT*PSSRGTGCPL*FT--RVPVLAKMAVMSKAYGN 3191108

Query: 360     -FGLLQGTSAETSGGLLICLPREQAARFCSE 389
                F L+ GT  +T G +LI LP EQ A FC++
Sbjct: 3191107 TFSLMHGTCPKTPGDILISLPHEQTAWFCAD 3191015



 Score = 45.8 bits (107), Expect(2) = 4e-25
 Identities = 22/37 (59%), Positives = 25/37 (67%)
 Frame = -3

Query: 389     EIKSSKYGEGHQAWIVGIVEKGNRTARIIDKPRVIEV 425
               +IKS K G GHQAWI+GIVE GN  A I D+    EV
Sbjct: 3191019 QIKSPKCGGGHQAWIIGIVETGNHVAGITDQRWTTEV 3190909


>gb|JH378144.1| Saimiri boliviensis boliviensis unplaced genomic scaffold scaffold00040,
               whole genome shotgun sequence
          Length = 18451090

 Score =  114 bits (285), Expect = 1e-23
 Identities = 54/63 (85%), Positives = 58/63 (92%)
 Frame = -2

Query: 372     GGLLICLPREQAARFCSEIKSSKYGEGHQAWIVGIVEKGNRTARIIDKPRVIEVLPRGAT 431
               GGLLICLPREQAARFC+EIKS KYGEGHQAWI+GIVEKGNRTARIIDKPR+IEV P+ AT
Sbjct: 5707275 GGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVAT 5707096

Query: 432     AAV 434
                 V
Sbjct: 5707095 QNV 5707087



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 30/35 (85%), Positives = 34/35 (97%)
 Frame = -2

Query: 116     GIGMDSCVIPLRHGGLSLVQTTDFFYPLVEDPYMM 150
               GIGMD+CVIPLRHGGLSLVQTTD+ YP+V+DPYMM
Sbjct: 5727603 GIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMM 5727499



 Score = 50.4 bits (119), Expect = 2e-04
 Identities = 34/69 (49%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
 Frame = -2

Query: 107     GPSPTFPALGIGMDSCVIPLRHGGLSLVQTTDFFYPLVEDPYMM---GRIACANVLSDLY 163
               GP P  P  G    S    L HG  S+  + D   P+V     +   GRIACANVLSDLY
Sbjct: 5725017 GPHPVAPTPGKSPVSLWSSL-HGSHSV--SADGKSPVVLSHISLSSQGRIACANVLSDLY 5724847

Query: 164     AMGITECDN 172
               AMG+TECDN
Sbjct: 5724846 AMGVTECDN 5724820



 Score = 48.1 bits (113), Expect = 0.001
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = -1

Query: 30      RSFSNYRPFEPQALGLSPSWRLTGFSGMKGXGCKVPQEALLKLLAGL 76
               R+ S    F P++  L  S+RLT F+ +KG GCKVPQ+ L KLL  L
Sbjct: 5735014 RTMSTRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESL 5734874


  Database: /cursos/BI/genomes/project_2013/Saimiri_boliviensis/genome
  .fa
    Posted date:  Oct 24, 2012  8:25 PM
  Number of letters in database: 2,608,572,064
  Number of sequences in database:  2685
  
Lambda     K      H
   0.320    0.136    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,156,794,193
Number of Sequences: 2685
Number of extensions: 17644844
Number of successful extensions: 69270
Number of sequences better than 1.0e-03: 9
Number of HSP's better than  0.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 136
Number of HSP's that attempted gapping in prelim test: 56624
Number of HSP's gapped (non-prelim): 35601
length of query: 448
length of database: 869,524,021
effective HSP length: 134
effective length of query: 314
effective length of database: 869,164,231
effective search space: 272917568534
effective search space used: 272917568534
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)