Referències

Articles

1. Hatfield DL, Berry MJ, and Gladyshev VN. Selenium: Its Molecular Biology and Role in Human Health, 2nd Ed., Springer-Verlag New York Inc., New York (2006).

2. Schomburg L, Schweizer U, Köhrle J. Selenium and selenoproteins in mammals: extraordinary, essential, enigmatic. Cellular and Molecular Life Sciences, 2004 May 27; 61: 1988– 1995.

3. Sergey V. Novoselov, Alexey V. Lobanov, Deame Hua, Marina V. Kasaikina, Dolph L. Hatfield, and Vadim N. Gladyshev. A highly efficient form of the selenocysteine insertion sequence element, PNAS, 2007; 104 (19): 7857-7862.

4. Diversity and functional plasticity of eukaryotic selenoproteins: identification and characterization of the SelJ family.Castellano S, Lobanov AV, Chapple C, Novoselov SV, Albrecht M, Hua D, Lescure A, Lengauer T, Krol A, Gladyshev VN, Guigó R.Proc Natl Acad Sci U S A. 2005 Nov 8;102(45):16188-93. Epub 2005 Oct 31.

5. Reeves MA, Hoffmann PR. The human selenoproteome. Cell Mol Life Sci. 2009 Apr 28; 66 (15): 2457-78.

6. Hammesfahr B, Odronitz F, Hellkamp M and Martin Kollmar (2011). diArk 2.0 provides detailed analyses of the ever increasing eukaryotic genome sequencing data. BMC Research Notes 4, 338. Disponible a: www.diark.org

7. Castellano S, Gladyshev VN, Guigó R and Berry MJ. SelenoDB 1.0: a database of selenoprotein genes, proteins and SECIS elements Nucleic Acids Res, 36, D339-D343 (2008). Disponible a: www.selenodb.org

8. Kryukov, G. V., Castellano, S., Novoselov, S. V., Lobanov, A. V., Zehtab, O., Guigo R, Gladyshev, V. N. Characterization of mammalian selenoproteomes (2003) Science, 300, 1439-1443. Disponible a: http://genome.unl.edu/SECISearch.html

9. Mariotti M, Guigo R - Selenoprofiles: profile-based scanning of eukaryotic genome sequences for selenoprotein genes.Bioinformatics. 2010 Nov 1;26(21):2656-63. Epub 2010 Sep 21

10. Novoselov SV, Lobanov AV, Hua D, Kasaikina MV, Hatfield DL, Gladyshev VN. A highly efficient form of the selenocysteine insertion sequence element in protozoan parasites and its use in mammalian cells. Proc Natl Acad Sci U S A. 2007 May 8;104(19):7857-62. Epub 2007 Apr 30.

Bases de dades

1. SelenoDB [web]. Disponible a: www.selenodb.org

2. SECISearch [web]. Disponible a: http://genome.unl.edu/SECISearch.html

3. NCBI [Web]. Disponible a: www.ncbi.nlm.nih.gov

4. Ensembl Genome Browser [web]. Disponible a: www.ensembl.org

Programes

1. NCBI BLAST. Basic Local Alignment Search Tool [web]. Disponible a: http://blast.ncbi.nlm.nih.gov/Blast.cgi

2. Exonerate. Disponible a: http://www.ebi.ac.uk/~guy/exonerate

3. Genewise. Disponible a: http://www.ebi.ac.uk/Tools/Wise2/index.html

4. T-coffee ebi [web]. Disponible a: http://www.ebi.ac.uk/Tools/msa/tcoffee

5. Jalview. Disponible a: http://www.jalview.org

6. SECISearch. Disponible a: http://genome.unl.edu/SECISearch.html

7. tRNAscan-SE 1.21. Disponible a: http://selab.janelia.org/tRNAscan-SE