TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000053_1.0 # Protein # Selenoprotein K1 (SelK1) #
Leishmania Braziliensis 
         (117 letters)

Database: L.tarentolae/genome.fa 
           7267 sequences; 31,598,840 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Lt_contig96  |  | 1 to 9672                                           152   4e-38

>Lt_contig96  |  | 1 to 9672
          Length = 9672

 Score =  152 bits (384), Expect = 4e-38
 Identities = 79/117 (67%), Positives = 83/117 (70%)
 Frame = +1

Query: 1   MAYIHNGRVVEKKPFTVRGFLLAFWGMLSLFARTLFTTQPMTQVVEEYQHXXXXXXXXXX 60
           MAYIHNGRVVEKKPFT+RGFL+A W  LSLFA+TLFTTQPMTQVVEEYQH          
Sbjct: 193 MAYIHNGRVVEKKPFTMRGFLVALWTALSLFAQTLFTTQPMTQVVEEYQHPVPRAPNAAA 372

Query: 61  XDGGILGSLRAMLNRRXXXXXXXXXXXXXXXXXXVNRRGGNVHTLPKAPISGGXASG 117
             GGILGSLRAMLNRR                  VNRRGGNVHTLPKAP+SGG ASG
Sbjct: 373 NGGGILGSLRAMLNRRGGGGQALGRGRDSGWAAAVNRRGGNVHTLPKAPMSGGCASG 543


  Database: L.tarentolae/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 31,598,840
  Number of sequences in database:  7267
  
Lambda     K      H
   0.324    0.140    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,104,479
Number of Sequences: 7267
Number of extensions: 24797
Number of successful extensions: 147
Number of sequences better than 1.0e-04: 1
Number of HSP's better than  0.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of query: 117
length of database: 10,532,946
effective HSP length: 86
effective length of query: 31
effective length of database: 9,907,984
effective search space: 307147504
effective search space used: 307147504
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 96 (41.6 bits)