TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000056_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Anopheles gambiae # Complete
         (369 letters)

Database: L.donovani_BPK282A1/genome.fa 
           36 sequences; 32,444,998 total letters

Searching....................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

contig_36                                                             235   4e-62

>contig_36
          Length = 2713248

 Score =  235 bits (600), Expect = 4e-62
 Identities = 142/370 (38%), Positives = 199/370 (53%), Gaps = 14/370 (3%)
 Frame = -1

Query: 2       FKPESYGLSHDFRLTKFSTLRGXGSKVPQDVLNRLLAGVYGEQLGDKDGKGPNKEEGVGI 61
               F P S GL  +F+LT ++ L+G   K+PQ  L  LL  +     G KD           +
Sbjct: 2120613 FDPVSLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQEL-STTPGQKD-----------V 2120470

Query: 62      GLDSSVIALKHD------LFLVQSVDFFYPLIDDPFMLGKIALANVVSDVFAVGATEIDQ 115
               G+D S++ L H       LFLV + DFF+P + DPF+ G+I  ANV+SD++++G  + D 
Sbjct: 2120469 GMDCSIVPLHHTNSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDLYSMGIPDCDT 2120290

Query: 116     IKLIVTAPTEFTEQEREVVVPMVMQGFLEAAKACNAPVQIGSIAENPWCVIGGAASAVCH 175
               + +++ A TE  E ER +    +M+GF E A+     V  G    NPW +IGG A AV  
Sbjct: 2120289 MLMLLAASTEMDEHERLITTREIMKGFAERARLATTTVTGGQTVMNPWPLIGGVAMAVVS 2120110

Query: 176     RSELIMPYNAQ-PGDALVLTKPLGTQLATNAYIWMGEQQSDSWAQLRERFTVADIEQTYR 234
                +E++ P      GD LVLTKPLG Q+A N   W+          +    +  +IE+ Y 
Sbjct: 2120109 EAEMVRPAGLLCAGDILVLTKPLGCQVAVNLKQWLLRPSPLYEEAIAGHISPEEIEELYN 2119930

Query: 235     IALESMSRLNKTGAELMKKYGAHAATDVTGFGLYGHAENLASHQTA-----DVDFHLDTL 289
               +A +SM RLN+ GA LM+K+GAH ATDVTGFG+ GHA N  + QT       +   L+ L
Sbjct: 2119929 MATDSMRRLNREGARLMRKHGAHGATDVTGFGILGHANNFGAAQTVGDAPRSLCLVLERL 2119750

Query: 290     PIIKNVREIAETLGRGAKLLAGKAVETSGGLLICLPREAAA-GFCEEYRRCTKH-EAWIV 347
               P+ K     ++ +    +LL G + ETSGGLL+  P   AA  FC E         +WIV
Sbjct: 2119749 PMFKTAVAASKRMNDKYRLLEGYSAETSGGLLVAFPSTTAAEAFCAELTAIDGGCPSWIV 2119570

Query: 348     GHVEKGARGV 357
               GHVE  A  V
Sbjct: 2119569 GHVEDRAANV 2119540


  Database: L.donovani_BPK282A1/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 32,444,998
  Number of sequences in database:  36
  
Lambda     K      H
   0.319    0.136    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,571,537
Number of Sequences: 36
Number of extensions: 216108
Number of successful extensions: 1305
Number of sequences better than 1.0e-04: 1
Number of HSP's better than  0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1186
Number of HSP's gapped (non-prelim): 317
length of query: 369
length of database: 10,814,999
effective HSP length: 102
effective length of query: 267
effective length of database: 10,811,327
effective search space: 2886624309
effective search space used: 2886624309
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 105 (45.1 bits)