genewise output
Score 356.18 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000033_1.0  139 FFYPLVEDPYMMGRIACANVLSDLYAMGITECDNMLMLLSVSQSMSEEE 
                     FF+PLV+DPY++G+IACANVLSDLY++GI +CDNMLMLL+ S  M+ E+ 
                     FFFPLVDDPYFQGKIACANVLSDLYSFGIEDCDNMLMLLACSTDMTAEQ 
gi|93569092|gb|20000 tttctgggcttcgaagtgagttgctttgaggtgaatattgttagaaggc 
                     tttcttaacatagatcgcattcatactgtaagaatttttcgccatccaa 
                     ctcgatttatcatatatcttaatttatttattttgagaaatattgaaaa 


SPP00000033_1.0  188 REKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPWIIIGGVATVVCQPNEF 
                     R+  + LM++GF D A   G+ V+GGQTV NPW I+GGVAT + + NEF 
                     RQWSSKLMIQGFNDQAICAGSKVSGGQTVKNPWPIVGGVATSILKTNEF 
gi|93569092|gb|20147 actttataacgtagcgatggaagaggcagaactcagggggatataaagt 
                     gagccatttagtaaactgcggatgggactaacgcttggtcccttacaat 
                     aagagaggaaacttgatcattattttacagtaggattttatctagccat 


SPP00000033_1.0  237 IMPDSAVVGDVLVLTKPLGTQVAVNAHQWLDNPERWNKVKMVVSREEVE 
                     I P +AV GDVLVLTKPLGTQV VN HQWL  PERW K+  + + EE E 
                     IKPVNAVPGDVLVLTKPLGTQVCVNFHQWLSKPERWEKINTITNAEECE 
gi|93569092|gb|20294 aacgaggcgggtgtaaccgacgtgatcctttacgctgaaaaaaagggtg 
                     tactactcgattttcactgcatgtataagtcacaggaatactcacaaga 
                     agagttcctcaaaacgtacaattacttagataaatgagccatataaata 


SPP00000033_1.0  286 LAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGILGHSQNLAKQQR 
                       +  A ++MA LNR  A LM  +NAHAATD+TGFGILGHS NLA+ Q  
                     QVFNYATLSMARLNRVGARLMKKYNAHAATDVTGFGILGHSTNLAQNQL 
gi|93569092|gb|20441 cgtatgactagataagggacaaatagcggaggagtgatgctaatgcacc 
                     attaacctctcgtagtgcgttaaaacacccatcgtgttgaccatcaaat 
                     aacctaagagaagtgacaaagagttttccctcttctagttattgtatac 


SPP00000033_1.0  335 NEVSFVIHNLPIIAKMAAVSK-ASGRFGLLQGTSAETSGGLLICLPREQ 
                       + F IH LPII  M  +    +  F LL+GTSAETSGGLLI + RE  
                     LPIRFEIHTLPIIKHMKKLEDHLNHPFKLLKGTSAETSGGLLISMSREN 
gi|93569092|gb|20588 tcactgacatcaaacaaatggctacctattagatggatggttatatcga 
                     tctgtatactcttaataataaataactattagcccaccggtttctcgaa 
                     aatttattaaactatgaggattattacaaaattatattttaatagtcat 


SPP00000033_1.0  383 AARFCSEIKSSKYGEGHQAWIVGIV-------EKGNRTARIIDKPRVIE 
                     A  FC EI      E   AWI+G V        +   T+ I++ P++IE 
                     AEAFCKEIYEI---EKQPAWIIGDVIDQSSNYDRSKNTSIILENPKIIE 
gi|93569092|gb|20735 gggttagatga   gaccgtaagggagcttatgataaataatgacaaag 
                     cactgaataat   aaaccgttgattaaccaaagcaacctttaacatta 
                     tatttaactat   aaaatgctttactacatttatattactaataatta 


SPP00000033_1.0  425 VLP                                               
                     V P                                               
                     VEP                                               
gi|93569092|gb|20873 ggc                                               
                     tac                                               
                     taa                                               


//
>gi|93569092|gb|CM000152.2|:subseq(5721658,50000).pep
FFFPLVDDPYFQGKIACANVLSDLYSFGIEDCDNMLMLLACSTDMTAEQRQWSSKLMIQG
FNDQAICAGSKVSGGQTVKNPWPIVGGVATSILKTNEFIKPVNAVPGDVLVLTKPLGTQV
CVNFHQWLSKPERWEKINTITNAEECEQVFNYATLSMARLNRVGARLMKKYNAHAATDVT
GFGILGHSTNLAQNQLLPIRFEIHTLPIIKHMKKLEDHLNHPFKLLKGTSAETSGGLLIS
MSRENAEAFCKEIYEIEKQPAWIIGDVIDQSSNYDRSKNTSIILENPKIIEVEP
//
>gi|93569092|gb|CM000152.2|:subseq(5721658,50000).[20000:20881].sp
TTCTTTTTCCCGTTAGTTGATGATCCATATTTCCAAGGTAAAATTGCATGTGCCAATGTT
TTATCAGATCTTTATTCATTTGGTATTGAAGATTGTGATAATATGTTAATGTTATTAGCA
TGTTCAACTGATATGACAGCAGAACAAAGACAATGGTCATCGAAATTGATGATACAAGGA
TTCAATGATCAGGCAATTTGCGCAGGTAGTAAAGTTAGTGGTGGTCAAACCGTAAAGAAT
CCATGGCCGATAGTTGGTGGTGTTGCAACTTCCATTTTAAAGACCAACGAATTTATAAAG
CCAGTGAATGCTGTCCCCGGTGACGTATTAGTATTAACCAAGCCTCTAGGCACACAAGTT
TGTGTAAACTTTCATCAATGGTTATCTAAACCAGAACGTTGGGAAAAGATCAACACAATT
ACAAATGCAGAAGAATGTGAACAAGTATTCAACTATGCAACACTGTCAATGGCAAGATTG
AATAGGGTAGGCGCAAGACTAATGAAAAAGTATAATGCTCATGCCGCCACCGATGTCACT
GGTTTCGGTATATTGGGTCATTCAACTAATTTGGCTCAAAATCAACTCTTACCAATTCGT
TTTGAAATTCATACATTACCAATCATTAAACATATGAAAAAGTTGGAAGATCATTTAAAT
CATCCATTCAAATTATTAAAAGGTACTTCAGCTGAAACTTCTGGTGGTTTATTAATTTCA
ATGTCTCGCGAAAATGCTGAAGCTTTTTGTAAAGAAATCTATGAAATTGAAAAACAACCA
GCTTGGATCATTGGTGATGTAATCGATCAATCCTCAAATTATGATAGATCTAAAAATACT
TCAATCATTTTAGAAAATCCAAAAATTATTGAAGTTGAACCA
//
gi|93569092|gb|CM000152.2|:subseq(5721658,50000)	GeneWise	match	20000	20881	364.17	+	.	gi|93569092|gb|CM000152.2|:subseq(5721658,50000)-genewise-prediction-1
gi|93569092|gb|CM000152.2|:subseq(5721658,50000)	GeneWise	cds	20000	20881	0.00	+	0	gi|93569092|gb|CM000152.2|:subseq(5721658,50000)-genewise-prediction-1
//