T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=96
*
 BAD AVG GOOD
*
PHYCAscaffold_1   :  96
SECP43.DROSO.gi   :  96
cons              :  96

PHYCAscaffold_1   -------LWMGDIQMHWDETFIASLFTTAVEQPV-IKLIRDKVTG
SECP43.DROSO.gi   MASVHCQLWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTG

cons                     ****.:: :  *.** : * .  *:*. ::*:*:* **


PHYCAscaffold_1   YPAGYGFLEFPTQQGAQQVLEAYNGQLIRLANTMHRFRMNWGAGG
SECP43.DROSO.gi   EPAGYCFVNFISDDHALDAMHKLNGKPIPGTNPIVRFRLNSASNS

cons               **** *::* ::: * :.:.  **: *  :*.: ***:* .:..


PHYCAscaffold_1   RRIETSD-DHSIFVGDLAPDVTDELLLSTFNARFTSVRGAKVVID
SECP43.DROSO.gi   YKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVILD

cons               ::  .: :.*::****:.** *  * ..*.::***:: ***::*


PHYCAscaffold_1   PITRMSKGFGFVRFGSKEEADQALQTMNGV-YCSSRPMRVSVATE
SECP43.DROSO.gi   SLG-FSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICNAVP

cons              .:  :***:****** ::* ..**  ***    .::*:::. *. 


PHYCAscaffold_1   RNKSRQQRAEQDGCRPHGHGLGVAAGANSTFSLWSS---------
SECP43.DROSO.gi   KPKSELGGAVGEGNTNYGYGSGMTAAGGTDYSQYYDPTSTYWQGY

cons              : **.   *  :*   :*:* *::*...: :* : .         


PHYCAscaffold_1   ---------------------------------------------
SECP43.DROSO.gi   QAWQGYYEQAGASITDAAAYYQQAMSQSHSNPQTLAQHAEAWSAQ

cons                                                           


PHYCAscaffold_1   ---------------------------------------------
SECP43.DROSO.gi   RSAQYEQQQQQQTASAANGAEDENGLVEHKFVLDVDKLNREAIDA

cons                                                           


PHYCAscaffold_1   ---------------------P
SECP43.DROSO.gi   DRRLYDALESSKWLPIEQLEVF

cons