T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=98
*
 BAD AVG GOOD
*
Contig19987_sub   :  98
OPtRNAsecMUS.gi   :  98
cons              :  98

Contig19987_sub   ---------------------------------------------
OPtRNAsecMUS.gi   MNPESFAAGERRVSPAYVRQGCEARRAHEHLIRLLLEQGKCPEDG

cons                                                           


Contig19987_sub   ---------------------------------------------
OPtRNAsecMUS.gi   WDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYR

cons                                                           


Contig19987_sub   ---------------------------------------------
OPtRNAsecMUS.gi   FIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLNVIKLAGVHSVA

cons                                                           


Contig19987_sub   ---------------------------------------------
OPtRNAsecMUS.gi   SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMV

cons                                                           


Contig19987_sub   ---------------------------------------------
OPtRNAsecMUS.gi   TAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTA

cons                                                           


Contig19987_sub   -------------------------VNNAYGLQDHAVCQGITQAA
OPtRNAsecMUS.gi   CFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGA

cons                                       ********.    : * *.*


Contig19987_sub   KKGRIDAIIQSTDKNFMVPVGGAIIAGPDEKFMNAIAKNYPGRAS
OPtRNAsecMUS.gi   RVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPGRAS

cons              : *****::** *************** :* *:: *:* ******


Contig19987_sub   GSPVLDLFITLISLGRDGYEKLLHERKEMYNYLKEKMSAIAKKYG
OPtRNAsecMUS.gi   ASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHN

cons              .** **::***:*** .**.***:*****: **. ::. :*: :.


Contig19987_sub   ERLLLTPHNPV----------------------------------
OPtRNAsecMUS.gi   ERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARA

cons              **** *****:                                  


Contig19987_sub   ---------------------------------------------
OPtRNAsecMUS.gi   VPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLF

cons                                                           


Contig19987_sub   ---------------------------------------------
OPtRNAsecMUS.gi   IKRLDKCLNIVRKEQTRASVVSGADRNKAEDADIEEMALKLDDVL

cons                                                           


Contig19987_sub   --------S
OPtRNAsecMUS.gi   GDVGQGPAL

cons