T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=99
*
BAD AVG GOOD
*
Lt_contig6577_s : 99
OPtRNAsecMUS.gi : 99
cons : 99
Lt_contig6577_s MDDRSLKLAEDFVPARYIDAGGESLRSTARILRCILAQRRCPDEA
OPtRNAsecMUS.gi MNPESFAAGERRVSPAYVRQGCEARRAHEHLIRLLLEQGKCPEDG
cons *: .*: .* *.. *: * *: *: :::* :* * :**::.
Lt_contig6577_s LTDAAIELILRQLSLMDTNNFAHHVGGGEREGRVVSALVRMRHFH
OPtRNAsecMUS.gi WDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYR
cons ::::**:*::*::**:*** : * *******.**** **::
Lt_contig6577_s LTHGIGRSGDLFSEQPKAAGSSLLYKITNVLMLDLLRQAGAPSTA
OPtRNAsecMUS.gi FIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLNVIKLAGVHSVA
cons : ********: : ********** **** *:*:::: **. *.*
Lt_contig6577_s AAVVVPMSTGMTLALVLRCVAKSRTEERYVIWPRIDQKTALKCID
OPtRNAsecMUS.gi SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMV
cons :..****:***:*:* : : :.*.: :*:********:.:*.:
Lt_contig6577_s AAGLIPVPVQLRPAVTLARSADPWVSANRDSLGRDKVVCVLSTTS
OPtRNAsecMUS.gi TAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTA
cons :**: ** :: *: *.*: :.** ::::*: ***:
Lt_contig6577_s CFAPRLPDNTVGIAQYCKEAGIPYVVNNAYGVQSRRIMTRLDAAQ
OPtRNAsecMUS.gi CFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGA
cons *****:**. :* * : .**:*******:** : * :: .
Lt_contig6577_s RLGRVDFVVQSGDKNFLVPVGGSIISSSDKARCQAVAALYAGRAS
OPtRNAsecMUS.gi RVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPGRAS
cons *:**:* .*** ****:*****:**:. ::. * :: :*.****
Lt_contig6577_s MSPIVDLFITALSLGRRGMQALWSDRYRCRARLIRQLREFARERR
OPtRNAsecMUS.gi ASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHN
cons ** :*::** **** * : * .:* . . * **:::*. :.
Lt_contig6577_s EVL------------------------------------------
OPtRNAsecMUS.gi ERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARA
cons * *
Lt_contig6577_s ---------------------------------------------
OPtRNAsecMUS.gi VPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLF
cons
Lt_contig6577_s ---------------------------------------------
OPtRNAsecMUS.gi IKRLDKCLNIVRKEQTRASVVSGADRNKAEDADIEEMALKLDDVL
cons
Lt_contig6577_s --------L
OPtRNAsecMUS.gi GDVGQGPAL
cons *