T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=97
*
 BAD AVG GOOD
*
gi|328872098|gb   :  97
OPtRNAsecMUS.gi   :  97
cons              :  97

gi|328872098|gb   ---------------------------------------RLPDKG
OPtRNAsecMUS.gi   MNPESFAAGERRVSPAYVRQGCEARRAHEHLIRLLLEQGKCPEDG

cons                                                     : *:.*


gi|328872098|gb   WDDQFIRWFLNDIAKMDSNNYVENAGVGEREGRIHSRIVQERHFG
OPtRNAsecMUS.gi   WDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYR

cons              **:. :. **:::* *****:: *.********: * :* .**: 


gi|328872098|gb   LAHGIGRSGDISEQQPKAAGSSLVQRLCSYLVMDSMSVAGLNSIG
OPtRNAsecMUS.gi   FIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLNVIKLAGVHSVA

cons              : **********  *********:::: . **:: :.:**::*:.


gi|328872098|gb   ECLVLPMATGMTIALTLMTFTKHCRPPTAKYVIWPRIDQKSCLKA
OPtRNAsecMUS.gi   SCFVVPMATGMSLTLCFLTL-RHKR-PKAKYIIWPRIDQKSCFKS

cons              .*:*:******:::* ::*: :* * *.***:**********:*:


gi|328872098|gb   IATAGLVPVVIENVLQGDVITTDLEAIENKIIELGPENVVCVYST
OPtRNAsecMUS.gi   MVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHST

cons              :.***: ********:** : ***:*:* ** *****:::*::**


gi|328872098|gb   TSCFAPRVPDRIIEISELCYKYNVGHIINNAYGLQCSKIVHAINE
OPtRNAsecMUS.gi   TACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQ

cons              *:*********: *:: :* :*:: *::*******.** :* *::


gi|328872098|gb   SCQSDKQRRVDAIIQSTDKNYMVPVGGAIITSPKKEKQQHKQKNY
OPtRNAsecMUS.gi   G---ARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMY

cons              .    :  *:**::** ***:*********:. ::   *. .* *


gi|328872098|gb   PGRANGSPILDLFITLLSMGRQGYKELLDERKQLLTYFRDQLASL
OPtRNAsecMUS.gi   PGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKL

cons              ****..** **::*****:* .**::**.***:::.*:  ** .*


gi|328872098|gb   SLQFPNCRLLDTPDNRISLGLALAVASGDQQKLSISMIGSKLFSR
OPtRNAsecMUS.gi   A-EAHNERLLQTPHNPISLAMTLKTIDGHHDK-AVTQLGSMLFTR

cons              : :  * ***:**.* ***.::* . .*.::* ::: :** **:*


gi|328872098|gb   SCSGARVIELPGSKKSVAGLDFESYGSHINNYHSSYLTVACAIGI
OPtRNAsecMUS.gi   QVSGARAVPL-GNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGM

cons              . ****.: * *. ::*:*  *..: ** :** .:**..*.***:


gi|328872098|gb   TKDDIDTFMKRLKKI------------------------------
OPtRNAsecMUS.gi   KMQDVDLFIKRLDKCLNIVRKEQTRASVVSGADRNKAEDADIEEM

cons              . :*:* *:***.*                               


gi|328872098|gb   ----------------L
OPtRNAsecMUS.gi   ALKLDDVLGDVGQGPAL

cons                              *