T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=99
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BAD AVG GOOD
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contig_09_subse : 99
OPtRNAsecMUS.gi : 99
cons : 99
contig_09_subse MDDRSLKLAEDFVSARYIEAGRESLRATARIMRSILAQRCCPDEG
OPtRNAsecMUS.gi MNPESFAAGERRVSPAYVRQGCEARRAHEHLIRLLLEQGKCPEDG
cons *: .*: .* **. *:. * *: ** :::* :* * **::*
contig_09_subse LTDAAIELILRQLSLMDTNNLAHHVGGGEREGRVVSALVRMRHFH
OPtRNAsecMUS.gi WDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYR
cons ::::**:*::*::**:**: : * *******.**** **::
contig_09_subse LTHGIGRSGDLFSEQPKAAGSSLLYKITNVLMLDLIRQAGAPSTA
OPtRNAsecMUS.gi FIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLNVIKLAGVHSVA
cons : ********: : ********** **** *:*::*: **. *.*
contig_09_subse AAVVVPMATGMTLALVLRCVAKTHATPRYVIWPRIDQKTALKCID
OPtRNAsecMUS.gi SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMV
cons :..********:*:* : : :.:...:*:********:.:*.:
contig_09_subse AAGLVPVPTPTSSSSLFLECHVDDVAAAVNAVGGPSQVVCVLSTT
OPtRNAsecMUS.gi TAGFEPVVIENVLEGDELRTDLKAVEAKIQEL-GPEHILCLHSTT
cons :**: ** . .. *. .:. * * :: : **.:::*: ***
contig_09_subse SCFAPRLPDNTVAIAQYCKKAGIPYVVNNAYGVQSRRIMTRLDAA
OPtRNAsecMUS.gi ACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQG
cons :*****:**. :* * : .**:*******:** : * :: .
contig_09_subse QRLGRVDFVVQSGDKNFLVPVGGSIICSGDKERCKAVAALYAGRA
OPtRNAsecMUS.gi ARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPGRA
cons *:**:* .*** ****:*****:**.. :: : :: :*.***
contig_09_subse SMSPIVDLFITALSLGRRGMQTLWSDRYKCRARLIRQLRVFARER
OPtRNAsecMUS.gi SASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAH
cons * ** :*::** **** * :.* .:* : . * **: :*. :
contig_09_subse REVL-----------------------------------------
OPtRNAsecMUS.gi NERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGAR
cons .* *
contig_09_subse ---------------------------------------------
OPtRNAsecMUS.gi AVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDL
cons
contig_09_subse ---------------------------------------------
OPtRNAsecMUS.gi FIKRLDKCLNIVRKEQTRASVVSGADRNKAEDADIEEMALKLDDV
cons
contig_09_subse ---------L
OPtRNAsecMUS.gi LGDVGQGPAL
cons *