T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=90
*
BAD AVG GOOD
*
gi|340503345|gb : 90
OPtRNAsecMUS.gi : 90
cons : 90
gi|340503345|gb ------------ISPQYIKSQ-NSFQTFSNTIKILLSRQLFPHPL
OPtRNAsecMUS.gi MNPESFAAGERRVSPAYVRQGCEARRAHEHLIRLLLEQGKCPEDG
cons :** *::. :: ::..: *::**.: *.
gi|340503345|gb PD-LEIELLISQLSLMDTNNFSQKIGVGEREGRIIS-IVQKRHFY
OPtRNAsecMUS.gi WDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYR
cons * :**:: :*::**:*** : ********: * :* :**:
gi|340503345|gb MSHGIGRSGNLSAEQPKAPGSSLILKITEFLVKDMLKLVGLCKKS
OPtRNAsecMUS.gi FIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLNVIKLAGVHSVA
cons : *******::** ****.****: ***: ** :::**.*: . :
gi|340503345|gb RNLLILPAATGMACFLTLMALKKNISEKKYVIWSRIDQKTCLKCI
OPtRNAsecMUS.gi -SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSM
cons . :::* ****: * :::*::: .: **:**.*****:*:*.:
gi|340503345|gb LAANLEPYVLELVI-GDKLCSDVEKLGKLLENNDFKKVLCVFSTT
OPtRNAsecMUS.gi VTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTT
cons ::*.:** *:* *: **:* :*:: : ::: . :::**:.***
gi|340503345|gb SCFAPRIPDNITEIGRICFVNNIPHIVNNAYGLC-AKIVNLINET
OPtRNAsecMUS.gi ACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQ-
cons :*****:**.: *:. ** :***:******* :* ::**::
gi|340503345|gb YSKNHRIDAIISSTDKNFLVPVGGAIIYGENK-LIKEINENYPGR
OPtRNAsecMUS.gi GARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPGR
cons :: ****::.* ****:******** * *: :*::*.: ****
gi|340503345|gb ASLSPIIDLFITFLSTGREKW-ELLNIRKENLIYLKEKLNVLLK-
OPtRNAsecMUS.gi ASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEA
cons ** ** :*::**:** * . : :**: *** ::**. :*: * :
gi|340503345|gb YEERVLST-ENSISVGFTLKNIKN-KNISILELGGILYNKRIMGG
OPtRNAsecMUS.gi HNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGA
cons ::**:*.* .*.**:.:***.*.. :: :: :**.:*:.::: *.
gi|340503345|gb RIIINNEKVLKIDNLFKNYGCSNDFYTELPYMTVACAIGMEKKEI
OPtRNAsecMUS.gi RAVPLGNVQTVSGHTFRGFMSHADNYP-CAYLNAAAAIGMKMQDV
cons * : .: .: *:.: . * *. .*:..*.****: :::
gi|340503345|gb DMFLIKLEGI-----------------------------------
OPtRNAsecMUS.gi DLFIKRLDKCLNIVRKEQTRASVVSGADRNKAEDADIEEMALKLD
cons *:*: :*:
gi|340503345|gb -----------N
OPtRNAsecMUS.gi DVLGDVGQGPAL
cons