T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=97
*
BAD AVG GOOD
*
gi|93569092|gb| : 97
OPtRNAsecMUS.gi : 97
cons : 97
gi|93569092|gb| ------------------------------------KKKKLPNIG
OPtRNAsecMUS.gi MNPESFAAGERRVSPAYVRQGCEARRAHEHLIRLLLEQGKCPEDG
cons :: * *: *
gi|93569092|gb| YNDKIIELILNEISLMDSNNFIENIGVGEREGRIYSGLVEKRHYG
OPtRNAsecMUS.gi WDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYR
cons :::. :**:*:*:::******: * ********: *.** :***
gi|93569092|gb| FAHGIGRSGDITEQQPKAAGSSLIQKLTHSLVLDAMKLAGLEQSS
OPtRNAsecMUS.gi FIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLNVIKLAGVH--S
cons * *********: *********::*:*:****:.:****:. *
gi|93569092|gb| LSNCLLLPMATGMTLALTMLTLKSINANNKRYVLWPRIDQKSCLK
OPtRNAsecMUS.gi VASCFVVPMATGMSLTLCFLTLRHKRP-KAKYIIWPRIDQKSCFK
cons ::.*:::******:*:* :***: .. : :*::*********:*
gi|93569092|gb| SIITAGLIPIVIPNQLDGDMIRTDLVAIEDKIKELGVDNILCVFS
OPtRNAsecMUS.gi SMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHS
cons *::***: *:** * *:** :**** *:* **:*** ::***:.*
gi|93569092|gb| TTSCFAPRVPDKIIEISEICKRYNIGHIINNAYGLQCSKILHNIS
OPtRNAsecMUS.gi TTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQ
cons **:********:: *:: ** .*:* *::*******.** :* *.
gi|93569092|gb| QACKLGRVDAFIQSTDKNFMVPVGGAIISGPNSEFIDQISRNYPG
OPtRNAsecMUS.gi QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPG
cons *..::**:***:** *************:* *. **::**: ***
gi|93569092|gb| RANSSPILDVFITLLSMGKQGWLNLLKERKELLIYFNEQLSKFAL
OPtRNAsecMUS.gi RASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAE
cons **.:** ***:*****:* .*: :*******:::*:. **.*:*
gi|93569092|gb| ENNEKLLNTINENKISFALTLSSNNFNNN----------------
OPtRNAsecMUS.gi AHNERLLQTP-HNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVS
cons :**:**:* .* **:*:**.: : :::
gi|93569092|gb| ---------------------------------------------
OPtRNAsecMUS.gi GARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQD
cons
gi|93569092|gb| ---------------------------------------------
OPtRNAsecMUS.gi VDLFIKRLDKCLNIVRKEQTRASVVSGADRNKAEDADIEEMALKL
cons
gi|93569092|gb| ----------EEI
OPtRNAsecMUS.gi DDVLGDVGQGPAL
cons :