T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=97
*
BAD AVG GOOD
*
T.congo.pschr.1 : 97
OPtRNAsecMUS.gi : 97
cons : 97
T.congo.pschr.1 MDERALHLAESIVEPRYIQAGVESQRSVERTVRSILAQRRCPDEG
OPtRNAsecMUS.gi MNPESFAAGERRVSPAYVRQGCEARRAHEHLIRLLLEQGKCPEDG
cons *: .:: .* *.* *:: * *::*: *: :* :* * :**::*
T.congo.pschr.1 LNDCAIELLLHQIAMMDTNNFTAHVGAGEREGRVASTLVQRRYYN
OPtRNAsecMUS.gi WDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYR
cons ::.::**:**::*:**:*** .: *.*********:** **:*.
T.congo.pschr.1 LTHGVGRSGDICSDQPKAAGSSLLYKLTNHMVLDLLRQAGTPSLA
OPtRNAsecMUS.gi FIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLNVIKLAGVHSVA
cons : **:******.: ********** *:** :**:::: **. *:*
T.congo.pschr.1 SAAVIPMATGMTISLVLRSIAHHRDPPRFVIWTRVDQKTALKCIE
OPtRNAsecMUS.gi SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMV
cons *. *:******:::* : :: *:* .:::**.*:***:.:*.:
T.congo.pschr.1 LSGFIPVVVPLRRASVFLQAHVDDVAASIERVGGPTNVLCVLSTT
OPtRNAsecMUS.gi TAGFEPVVIENVLEGDELRTDLKAVEAKIQEL-GPEHILCLHSTT
cons :** ***: . *::.:. * *.*:.: ** ::**: ***
T.congo.pschr.1 SCFAPH-------------------------RVQSRSIMQRIDAA
OPtRNAsecMUS.gi ACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQG
cons :****: :** . *: *: .
T.congo.pschr.1 IRLGRVDAIVQSGDKNFLVPVGGAVLSGGRTE-VARATSLYAGRA
OPtRNAsecMUS.gi ARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPGRA
cons *:**:**:*** ****:******:::* . : :.:*.***
T.congo.pschr.1 SASPVVDLFITALSLGRSGFQRLWDARYFLRELLEQRLRDFARAR
OPtRNAsecMUS.gi SASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAH
cons **** :*::** **** **:::* . * : *. :*:.:*.*:
T.congo.pschr.1 EETL-----------------------------------------
OPtRNAsecMUS.gi NERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGAR
cons :* *
T.congo.pschr.1 ---------------------------------------------
OPtRNAsecMUS.gi AVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDL
cons
T.congo.pschr.1 ---------------------------------------------
OPtRNAsecMUS.gi FIKRLDKCLNIVRKEQTRASVVSGADRNKAEDADIEEMALKLDDV
cons
T.congo.pschr.1 ---------L
OPtRNAsecMUS.gi LGDVGQGPAL
cons *