T-COFFEE, Version_8.99(Fri Feb 18 08:27:45 CET 2011 - Revision 596)
Cedric Notredame
CPU TIME:0 sec.
SCORE=99
*
BAD AVG GOOD
*
PHYCAscaffold_8 : 99
PHYCAscaffold_8 : 99
PHYCAscaffold_8 : 99
PHYCAscaffold_8 : 99
PHYCAscaffold_8 : 99
PHYCAscaffold_8 : 99
PHYCAscaffold_8 : 99
cons : 99
PHYCAscaffold_8 ----AEETNYDYDLVVIGGGSGGLACSKEAASF
PHYCAscaffold_8 --------NYDYDLVVIGGGSGGLACSKEAASF
PHYCAscaffold_8 --------NYDYDLVVIGGGSGGLACSKEAASF
PHYCAscaffold_8 -----EETNYDYDLVVIGGGSGGLACSKEAASF
PHYCAscaffold_8 STADAEETNYDYDLVVIGGGSGGLACSKEAASF
PHYCAscaffold_8 -----EETNYDYDLVVIGGGSGGLACSKEAASF
PHYCAscaffold_8 --------NYDYDLVVIGGGSGGLACSKEAASF
cons *************************
PHYCAscaffold_8 GQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPK
PHYCAscaffold_8 GQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPK
PHYCAscaffold_8 GQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPK
PHYCAscaffold_8 GQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPK
PHYCAscaffold_8 GQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPK
PHYCAscaffold_8 GQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPK
PHYCAscaffold_8 GQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPK
cons *********************************
PHYCAscaffold_8 KLMHQSSLIGEVIHHDGANFGWNLSSGDGNAPT
PHYCAscaffold_8 KLMHQSSLIGEVIHHDGANFGWNLSSGDGNAPT
PHYCAscaffold_8 KLMHQSSLIGEVIHHDGANFGWNLSSGDGNAPT
PHYCAscaffold_8 KLMHQSSLIGEVIHHDGANFGWNLSSGDGNAPT
PHYCAscaffold_8 KLMHQSSLIGEVIHHDGANFGWNLSSGDGNAPT
PHYCAscaffold_8 KLMHQSSLIGEVIHHDGANFGWNLSSGDGNAPT
PHYCAscaffold_8 KLMHQSSLIGEVIHHDGANFGWT----------
cons **********************.
PHYCAscaffold_8 FNWKQLVSNVDGYIKSINFKYKVELRSKYVKYE
PHYCAscaffold_8 FNWKQLVSNVDGYIKSINFKYKVELRSKYVKYE
PHYCAscaffold_8 FNWKQLVSNVDGYIKSINFKYKVELRSKYVKYE
PHYCAscaffold_8 FNWKQLVSNVDGYIKSINFKYKVELRSKYVKYE
PHYCAscaffold_8 FNWKQLVSNVDGYIKSINFKYKVELRSKYVKYE
PHYCAscaffold_8 FNWKQLVSNVDGYIKSINFKYKVELRSKYVKYE
PHYCAscaffold_8 FNWKQLVSNVDGYIKSINFKYKVELRSKYVKYE
cons *********************************
PHYCAscaffold_8 NFLGSFVNPHTLELWHPRKGTKQITTRDVVIAV
PHYCAscaffold_8 NFLGSFVNPHTLELWHPRKGTKQITTRDVVIAV
PHYCAscaffold_8 NFLGSFVNPHTLELWHPRKGTKQITTRDVVIAV
PHYCAscaffold_8 NFLGSFVNPHTLELWHPRKGTKQITTRDVVIAV
PHYCAscaffold_8 NFLGSFVNPHTLELWHPRKGTKQITTRDVVIAV
PHYCAscaffold_8 NFLGSFVNPHTLELWHPRKGTKQITTRDVVIAV
PHYCAscaffold_8 NFLGSFVNPHTLELWHPRKGTKQITTRDVVIAV
cons *********************************
PHYCAscaffold_8 GGRPKELTCPGGEHAISSDDIFWMKKKEPGKTL
PHYCAscaffold_8 GGRPKELTCPGGEHAISSDDIFWMKKKEPGKTL
PHYCAscaffold_8 GGRPKELTCPGGEHAISSDDIFWMKKKEPGKTL
PHYCAscaffold_8 GGRPKELTCPGGEHAISSDDIFWMKKKEPGKTL
PHYCAscaffold_8 GGRPKELTCPGGEHAISSDDIFWMKKKEPGKTL
PHYCAscaffold_8 GGRPKELTCPGGEHAISSDDIFWMKKKEPGKTL
PHYCAscaffold_8 GGRPKELTCPGGEHAISSDDIFWMKKKEPGKTL
cons *********************************
PHYCAscaffold_8 VVGASYVALECAGFLKGMGYDVKVMVRSILLRG
PHYCAscaffold_8 VVGASYVALECAGFLKGMGYDVKVMVRSILLRG
PHYCAscaffold_8 VVGASYVALECAGFLKGMGYDVKVMVRSILLRG
PHYCAscaffold_8 VVGASYVALECAGFLKGMGYDVKVMVRSILLRG
PHYCAscaffold_8 VVGASYVALECAGFLKGMGYDVKVMVRSILLRG
PHYCAscaffold_8 VVGASYVALECAGFLKGMGYDVKVMVRSILLRG
PHYCAscaffold_8 VVGASYVALECAGFLKGMGYDVKVMVRSILLRG
cons *********************************
PHYCAscaffold_8 FDQDMADKIGEYMEVQSGIEFIRKTVPQSITKL
PHYCAscaffold_8 FDQDMADKIGEYME-------------------
PHYCAscaffold_8 FDQDMADKIGEYMEVQSGIEFIRKTVPQSITKL
PHYCAscaffold_8 FDQDMADKIGEYMEVQSGIEFIRKTVPQSITKL
PHYCAscaffold_8 FDQDMADKIGEYMEVQSGIEFIRKTVPQSITKL
PHYCAscaffold_8 FDQDMADKIGEYMEVQSGIEFIRKTVPQSITKL
PHYCAscaffold_8 FDQDMADKIGEYMEVQSGIEFIRKTV-------
cons **************
PHYCAscaffold_8 ENGQLLVKWTSEDGESCEEAFDTVLNATGRDPD
PHYCAscaffold_8 ---------------SCEEAFDTVLNATGRDPD
PHYCAscaffold_8 ENGQLLVKWTSEDGESCEEAFDTVLNATGRDPD
PHYCAscaffold_8 ENGQLLVKWTSEDGESCEEAFDTVLNATGRDPD
PHYCAscaffold_8 ENGQLLVKWTSEDGESCEEAFDTVLNATGRDPD
PHYCAscaffold_8 ENGQLLVKWTSEDGESCEEAFDTVLNATGRDPD
PHYCAscaffold_8 -------KWTSEDGESCEEAFDTVLNATGRDPD
cons ******************
PHYCAscaffold_8 VAKLNLDKAGVKLNEKSGRIWVKNEQTSTPNIY
PHYCAscaffold_8 VAKLNLDKAGVKLNEKSGRIWVKNEQTSTPNIY
PHYCAscaffold_8 VAKLNLDKAGVKLNEKSGRIWVKNEQTSTPNIY
PHYCAscaffold_8 VAKLNLDKAGVKLNEKSGRIWVKNEQTSTPNIY
PHYCAscaffold_8 VAKLNLDKAGVKLNEKSGRIWVKNEQTSTPNIY
PHYCAscaffold_8 VAKLNLDKAGVKLNEKSGRIWVKNEQTSTPNIY
PHYCAscaffold_8 VAKLNLDKAGVKLNEKSGRIWVKNEQTSTPNIY
cons *********************************
PHYCAscaffold_8 AIGDVIDAPELTPVAIQAGRLLSRRLYNNSTVQ
PHYCAscaffold_8 AIGDVIDAPELTPVAIQAGRLLSRRLYNNSTVQ
PHYCAscaffold_8 AIGDVIDAPELTPVAIQAGRLLSRRLYNNSTVQ
PHYCAscaffold_8 AIGDVIDAPELTPVAIQAGRLLSRRLYNNSTVQ
PHYCAscaffold_8 AIGDVIDAPELTPVAIQAGRLLSRRLYNNSTVQ
PHYCAscaffold_8 AIGDVIDAPELTPVAIQAGRLLSRRLYNNSTVQ
PHYCAscaffold_8 AIGDVIDAPELTPVAIQAGRLLSRRLYNNSTVQ
cons *********************************
PHYCAscaffold_8 MDYEKVCTAVFTPIEYGCCGMSEEDSKERFGED
PHYCAscaffold_8 MDYEKVCTAVFTPIEYGCCGMSEEDSKERFGED
PHYCAscaffold_8 MDYEKVCTAVFTPIEYGCCGMSEEDSKERFGED
PHYCAscaffold_8 MDYEKVCTAVFTPIEYGCCGMSEEDSKERFGED
PHYCAscaffold_8 MDYEKVCTAVFTPIEYGCCGMS-----------
PHYCAscaffold_8 MDYEKVCTAVFTPIEYGCCGMSEEDSKERFGED
PHYCAscaffold_8 MDYEKVCTAVFTPIEYGCCGMSEEDSKERFGED
cons **********************
PHYCAscaffold_8 NIEVYHTNFVPLEWSLSTDTRTAAESCYLKVIC
PHYCAscaffold_8 NIEVYHTNFVPLEWSLSTDTRTAAESCYLKVIC
PHYCAscaffold_8 NIEVYHTNFVPLEWSLSTDTRTAAESCYLKVIC
PHYCAscaffold_8 NIEVYHTNFVPLEWSLSTDTRTAAESCYLKVIC
PHYCAscaffold_8 -----------------------AESCYLKVIC
PHYCAscaffold_8 NIEVYHTNFVPLEWSLSTDTRTAAESCYLKVIC
PHYCAscaffold_8 NIEVYHTNFVPLEWSLSTDTRTAAESCYLKVIC
cons **********
PHYCAscaffold_8 DKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGF
PHYCAscaffold_8 DKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGF
PHYCAscaffold_8 DKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGF
PHYCAscaffold_8 DKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGF
PHYCAscaffold_8 DKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGF
PHYCAscaffold_8 DKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGF
PHYCAscaffold_8 DKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGF
cons *********************************
PHYCAscaffold_8 TYDQMVDTVGIHPTTAESFTTLEVTKSSGGATT
PHYCAscaffold_8 TYDQMVDTVGIHPTTAESFTTLEVTKS------
PHYCAscaffold_8 TYDQMVDTVGIHPTTAESFTTLEVTKSSGGATT
PHYCAscaffold_8 TYDQMVDTVGIHPTTAESFTTLEVTKSSGGATT
PHYCAscaffold_8 TYDQMVDTVGIHPTTAESFTTLEVTKSSGGATT
PHYCAscaffold_8 TYDQMVDTVGIHPTTAESFTTLEVTKSSGGATT
PHYCAscaffold_8 TYDQMVDTVGIHPTTAESFTTLEVTKSSGGATT
cons ***************************
PHYCAscaffold_8 GGGCXG
PHYCAscaffold_8 ----SG
PHYCAscaffold_8 GGGCXG
PHYCAscaffold_8 GGGCXG
PHYCAscaffold_8 GGGCXG
PHYCAscaffold_8 GGGCXG
PHYCAscaffold_8 GGGCXG
cons *