T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=99
*
 BAD AVG GOOD
*
scaffold_3_subs   :  99
SPP00000080_1.0   :  99
cons              :  99

scaffold_3_subs   ---------------------------------------------
SPP00000080_1.0   MAAMVAAMVAALRGPSRRFRPRTRALTRGTRGAASAAGGRQSFDL

cons                                                           


scaffold_3_subs   ---------------------------------------------
SPP00000080_1.0   LVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCV

cons                                                           


scaffold_3_subs   ---------------------------------------------
SPP00000080_1.0   NVGCIPKKLMHQAALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAV

cons                                                           


scaffold_3_subs   ---------------------------------------------
SPP00000080_1.0   QNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKAT

cons                                                           


scaffold_3_subs   ---------------------------------------------
SPP00000080_1.0   LLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESPGKTS

cons                                                           


scaffold_3_subs   ---------------------------------------------
SPP00000080_1.0   VPAAEDVALECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEH

cons                                                           


scaffold_3_subs   ------------------------------------------DAL
SPP00000080_1.0   MESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTV

cons                                                        *::


scaffold_3_subs   IMCIGRNPNVQTLQLEKANVAYDDKTGILVKNSLRSKTNRRVFAC
SPP00000080_1.0   LWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYAI

cons              : .*** *:.:**:****.:: : *.  :: :: .:.:  :::* 


scaffold_3_subs   GD-------------------------------------------
SPP00000080_1.0   GDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVYHAYYKP

cons              **                                           


scaffold_3_subs   ---------------------------------------------
SPP00000080_1.0   LEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFA

cons                                                           


scaffold_3_subs   ---------------------------------------------
SPP00000080_1.0   LGIKCGASYAQVMQTVGIHPTCSEEVVKLHISKRSGLEPTVTGCX

cons                                                           


scaffold_3_subs   -
SPP00000080_1.0   G

cons