T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=89
*
 BAD AVG GOOD
*
scaffold_3_subs   :  89
SPP00000091_1.0   :  89
cons              :  89

scaffold_3_subs   -------------------------------DYDIIIIGAGASGM
SPP00000091_1.0   MSTIKFLRSSTHNALRSSLGWCRLAASRPRYDYDLVVLGGGSAGL

cons                                             ***::::*.*::*:


scaffold_3_subs   FASGTTSMLGSKTLLLDLSNNNTNSNSNNTNNVGGDCTNYACVPS
SPP00000091_1.0   ACAKEAAGCGARVLCFDYVKPTP---VGTKWGIGGTCVNVGCIPK

cons               .:  ::  *::.* :*  : ..    ... .:** *.* .*:*.


scaffold_3_subs   KA-------------------------------------------
SPP00000091_1.0   KLMHQASLLGEAVHEAVAYGWNVDDTNIRPDWRKLVRSVQNHIKS

cons              *                                            


scaffold_3_subs   ---------------------------------------------
SPP00000091_1.0   VNWVTRVDLRDKKVEYVNSMATFRDSHTIEYVAMPGAEHRQVTSE

cons                                                           


scaffold_3_subs   ---------------------------------------------
SPP00000091_1.0   YVVVAVGGRPRYPDIPGAVELGITSDDIFSYEREPGRTLVVGAGY

cons                                                           


scaffold_3_subs   ---------------------------------------------
SPP00000091_1.0   VGLECACFLKGLGYEPTVMVRSIVLRGFDRQMSELLAAMMTERGI

cons                                                           


scaffold_3_subs   ---------------------------------------------
SPP00000091_1.0   PFLGTTIPKAVERQADGRLLVRYRNTTTQMDGSDVFDTVLWAIGR

cons                                                           


scaffold_3_subs   ---------------------------------------------
SPP00000091_1.0   KGLIEDLNLDAAGVKTHDDKIVVDAAEATSVPHIFAVGDIIYGRP

cons                                                           


scaffold_3_subs   ---------------------------------------------
SPP00000091_1.0   ELTPVAILSGRLLARRLFAGSTQLMDYADVATTVFTPLEYSCVGM

cons                                                           


scaffold_3_subs   ---------------------------------------------
SPP00000091_1.0   SEETAIELRGADNIEVFHGYYKPTEFFIPQKSVRHCYLKAVAEVS

cons                                                           


scaffold_3_subs   ---------------------------------------------
SPP00000091_1.0   GDQKILGLHYIGPVAGEVIQGFAAALKTGLTVKTLLNTVGIHPTT

cons                                                           


scaffold_3_subs   -----------------------V
SPP00000091_1.0   AEEFTRLSITKRSGRDPTPASCCS

cons