T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=95
*
 BAD AVG GOOD
*
scaffold_61_sub   :  95
scaffold_61_sub   :  95
cons              :  95

scaffold_61_sub   ------LVVIGGGSGGMAAAKEAALLGAKVALCDFVKPSPEGTTW
scaffold_61_sub   SSFLRKLVVIGGGSGGMAAAKEAALLGAKVALCDFVKPSPEGTTW

cons                    ***************************************


scaffold_61_sub   GLGGTCVNVGCIPKKLFHIGATLRESIQADANFFGISSVGVKPDE
scaffold_61_sub   GLGGTCVNVGCIPKKLFHIGATLRESIQADANFFGISSVG-----

cons              ****************************************     


scaffold_61_sub   MGQPPTLKTDQNWMAVKDNIQNYIRSLNFKYRVGLREKSVQYLNK
scaffold_61_sub   --------TDQNWMAVKDNIQNYIRSLNFKYRVGLREKSVQYLNK

cons                      *************************************


scaffold_61_sub   LASFKDDHTVELVDKKGQTSEITASRFLVATGGRPTPLDCEGGDL
scaffold_61_sub   LASFKDDHTVELVDKKGQTSEITASRFLVATGGRPTPLDCEGGDL

cons              *********************************************


scaffold_61_sub   AISSDDVFFLDKDPGKTLCVGASYISLECAGFLAGMSKDVTVAVR
scaffold_61_sub   AISSDDVFFLDKDPGKTLCVGASYISLECAGFLAGMSKDVTVAVR

cons              *********************************************


scaffold_61_sub   SILLRGFDRECSERIGDYMKEHGVKFKTKVTPSKLERVENDRIKV
scaffold_61_sub   SILLRGFDRECSERIGDYMKEHGVKFKTKVTPSKLERVE------

cons              ***************************************      


scaffold_61_sub   TFSDGTDDVYDTVLGAVGRTADTIKLRLESVNVDTNPKNRKIKTI
scaffold_61_sub   ---------YDTVLGAVGRTADTIKLRLESVNVDTNPKNRKIKTI

cons                       ************************************


scaffold_61_sub   NEQSSCPNIYAIGDVMDGCPELTPVAIQAGKALARRLYGGSKEPM
scaffold_61_sub   NEQSSCPNIYAIGDVMDGCPELTPVAIQAGKALARRLYGGSKEPM

cons              *********************************************


scaffold_61_sub   DYINICTTVFTPIEYACIGLSEEDAIAKHGKDGIEVYHREFLPLE
scaffold_61_sub   DYINICTTVFTPIEYACIGLSEEDAIAKHGKDGIEVYHREFLPLE

cons              *********************************************


scaffold_61_sub   WSLSRHDSNAFAKILVDKKSSDEQVVGIQIXGPNAGEIMQGYGVS
scaffold_61_sub   WSLSRHDSNAFAKILVDKKSSDEQVVGIQI------ELVPM-LER

cons              ******************************      *::      


scaffold_61_sub   MKNGLTYR---------------------------QLTDTVGIHP
scaffold_61_sub   LCRGMVYQXRMVXHTDSLLIQLVFIQHHQKNLXHYLLLRVVAMTP

cons              : .*:.*:                            *  .*.: *


scaffold_61_sub   TSSEELVTLSITKSSGDDAAAGGC
scaffold_61_sub   ------------------LLVDAE

cons                                  ...