T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=95
*
 BAD AVG GOOD
*
scaffold_3_subs   :  95
gi|323451867|gb   :  95
cons              :  95

scaffold_3_subs   -----------LDYDIIIIGAGASGMFASGTTSMLGSKTLLLDLS
gi|323451867|gb   MVDDGFTKEHGFDYDVVVVGGGSGGLACSKECAKLGAKVAVLDFV

cons                         :***::::*.*:.*: .*   : **:*. :**: 


scaffold_3_subs   NNNTNSNSNNTNNVGGDCTNYACVPSKAV----------------
gi|323451867|gb   K---PSPAGSTWGLGGTCVNVGCIPKKLMHTASIIGETLKDDAAA

cons              :    :..* .:** *.* .*:*.* :                


scaffold_3_subs   ---------------------------------------------
gi|323451867|gb   FGWKDAAAGAHDWESMKSTVQDHIKSLNFKYRVALREAGITYLNR

cons                                                           


scaffold_3_subs   ---------------------------------------------
gi|323451867|gb   LGEFEDKNTISLTDKKGNKTSVTAARFIVAVGGRPNKLGCPGGEH

cons                                                           


scaffold_3_subs   ---------------------------------------------
gi|323451867|gb   AIDSDDLFSLPKAPGRVLCVGGGYIALECGGFTAGMGYPTTCMVR

cons                                                           


scaffold_3_subs   ---------------------------------------------
gi|323451867|gb   SILLRGFDRECVGKIEAHIKHHGVQLQVGVTPAKIEKDAATGVLT

cons                                                           


scaffold_3_subs   ---------------------------------------------
gi|323451867|gb   VTDSGGGVHEYDTVLVATGRYADTAALGIDNVPGASANVNAKTKK

cons                                                           


scaffold_3_subs   ---------------------------------------------
gi|323451867|gb   LECVDEQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARRLFGG

cons                                                           


scaffold_3_subs   ---------------------------------------------
gi|323451867|gb   KTEPMDYECVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISE

cons                                                           


scaffold_3_subs   ---------------------------------------------
gi|323451867|gb   FAPLEYALSETRSERGDGCFAKLVVDKSTGKVVGFHYLGPNAGEI

cons                                                           


scaffold_3_subs   ---------------------------------------------
gi|323451867|gb   TQGFSIAMRKGATYADFISTVGIHPTVAEEFTSMTVTKSSGESAA

cons                                                           


scaffold_3_subs   ------
gi|323451867|gb   KGGCXG

cons