T-COFFEE, Version_8.99(Fri Feb 18 08:27:45 CET 2011 - Revision 596)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=95
*
 BAD AVG GOOD
*
PHYCAscaffold_1   :  95
SPP00000038_1.0   :  94
cons              :  95

PHYCAscaffold_1   -----LNVNVGVLGHVDSGKTSLVRALSTQLST
SPP00000038_1.0   MAGRRVNVNVGVLGHIDSGKTALARALSTTAST

cons                   :*********:*****:*.*****  **


PHYCAscaffold_1   AALDKHPQSQQRGITLDLGFSSFLLKPSAQVKP
SPP00000038_1.0   AAFDKQPQSRERGITLDLGFSCFSVPLPARLRS

cons              **:**:***::**********.* :  .*:::.


PHYCAscaffold_1   CL--------------KPCLQVTLVDCPGHASL
SPP00000038_1.0   SLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASL

cons              .*              :* **************


PHYCAscaffold_1   FRTILGGVAIIDTVLLVIDCRKGLQAQTIESLL
SPP00000038_1.0   IRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLV

cons              :***:**. *** ::****  **:*:*: *.*:


PHYCAscaffold_1   LATLIAKRSVVVALTKTDLVPSAERDNVIGKCS
SPP00000038_1.0   IGQ-IACQKLVVVLNKIDLLPEGKRQAAIDKMT

cons              :.  ** :.:**.*.* **:*..:*: .*.* :


PHYCAscaffold_1   HEVRSFMATNFNFHDTSSIPVVPVAV----GSN
SPP00000038_1.0   KKMQKTL-ENTKFRGAPIIPVAAKPGGPEAPET

cons              ::::. :  * :*:.:. ***.. .      ..


PHYCAscaffold_1   QDPQGIPQLLEALNANLQVPERDHSGSFCLAVD
SPP00000038_1.0   EAPQGIPELIELLTSQISIPTRDPSGPFLMSVD

cons              : *****:*:* *.:::.:* ** **.* ::**


PHYCAscaffold_1   HCFSVPGNGTILTGTVLSGALERGDELELLPLG
SPP00000038_1.0   HCFSIKGQGTVMTGTILSGSISLGDSVEIPALK

cons              ****: *:**::***:***::. **.:*: .* 


PHYCAscaffold_1   AKVKVKTLQVFKKDVAKCSQGDRVGLRVNGLDP
SPP00000038_1.0   VVKKVKSMQMFHMPITSAMQGDRLGICVTQFDP

cons              .  ***::*:*:  ::.. ****:*: *. :**


PHYCAscaffold_1   ALVERALAVSPPGSLTPVTQVVIPVTKVPFFHE
SPP00000038_1.0   KLLERGLVCA-PESLHTVHAALISVEKIPYFRG

cons               *:**.*. : * ** .*  .:*.* *:*:*: 


PHYCAscaffold_1   ISCKSGGKCHVTVGHTTIIAMATFF--------
SPP00000038_1.0   -PLQTKAKFHITVGHETVMGRLMFFSPAPDNFD

cons               . :: .* *:**** *::.   **        


PHYCAscaffold_1   ---------------------------------
SPP00000038_1.0   QEPILDSFNFSQEYLFQEQYLSKDLTPAVTDND

cons                                               


PHYCAscaffold_1   ---------------------------------
SPP00000038_1.0   EADKKAGQATEGHCPRQQWALVEFEKPVTCPRL

cons                                               


PHYCAscaffold_1   ---------------------------------
SPP00000038_1.0   CLVIGSRLDADIHTNTCRLAFHGILLHGLEDRN

cons                                               


PHYCAscaffold_1   ---------------------------------
SPP00000038_1.0   YADSFLPRLKVYKLKHKHGLVERAMDDYSVIGR

cons                                               


PHYCAscaffold_1   ---------------------------------
SPP00000038_1.0   SLFKKETNIQLFVGLKVHLSTGELGIIDSAFGQ

cons                                               


PHYCAscaffold_1   ---------------------------------
SPP00000038_1.0   SGKFKIHIPGGLSPESKKILTPALKKRARAGRG

cons                                               


PHYCAscaffold_1   ---------------------------------
SPP00000038_1.0   EATRQEESAERSEPSQHVVLSLTFKRYVFDTHK

cons                                               


PHYCAscaffold_1   -----T
SPP00000038_1.0   RMVQSP

cons                   .