T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=99
*
 BAD AVG GOOD
*
SelI_Phytophtor   :  99
PHYCAscaffold_2   :  99
cons              :  99

SelI_Phytophtor   MSNATYESETAVEASQIHALKQRVRHRSIGDGKSTYFGKYVSQEG
PHYCAscaffold_2   MSKATYDPPTALEASQVHALKQRVRHRSTGDGKSTYFGKYVSQEG

cons              **:***:. **:****:*********** ****************


SelI_Phytophtor   SEKLRTYEYHGADNSLVYK-VLTPMNNFLVKLLPLWLAPNLITLI
PHYCAscaffold_2   SEKLLTYEYHGADNSLIYKHVLTPMNNFLVELLPLWLAPNLITLI

cons              **** ***********:** **********:**************


SelI_Phytophtor   GLILVGGSHTLFVFLCPFLVGDAPWWAMVVAALALFTYQTLDNLD
PHYCAscaffold_2   GLVLVGGTHTLFVFLCPLLEGDAPWWAMVVAGAALFGYQTLDNLD

cons              **:****:*********:* ***********. *** ********


SelI_Phytophtor   GKQARRTKSSSPLGLLFDHGCVALNVSVGTMTMASILQMGTTWRT
PHYCAscaffold_2   GKQARRTKSSSPLGLLFDHGCDALNVSVGTMTMASILQMGTTWRT

cons              ********************* ***********************


SelI_Phytophtor   LGFVLSGHFVFIFATWE-YYSGSLELPLYNGPTEGYLIGIALKLV
PHYCAscaffold_2   LGFVLSAHFVFIFATWEEYYSGSLELPIINGPTEGILIGIALKLF

cons              ******.********** *********: ****** ********.


SelI_Phytophtor   TAVVGVGFWNQEMIEGVQNNSLFVIVTMISSCFTLLVKYVGGLIF
PHYCAscaffold_2   TAVVGVDFWNEEIIDGVQNNSLFVIVTMISSCFTLLVKYV-----

cons              ******.***:*:*:*************************     


SelI_Phytophtor   CIPAVRFANLSMFCFITSVRNALHAVRLNQDSVLVAFTRLLPFVV
PHYCAscaffold_2   -----------------SVRNALHAVRLNQDSVLVAFTRLLPFLI

cons                               **************************::


SelI_Phytophtor   INTLAGLWALYSPSDIFSTHPRMFLWMLGLLNSKLVLHLMLAHLC
PHYCAscaffold_2   LNTLAGLWALYSPSDIFSTHPRMFLWMLGLLNSKLVLHLMLAHLC

cons              :********************************************


SelI_Phytophtor   GEEYHPFRKTLVPIFYVAGHCAFCMVEGIYDAINEELIVREFFFL
PHYCAscaffold_2   GEEYHPFRKTLVPIFYVAGHCAFCMLEGIYEAINEELIVREFFFL

cons              *************************:****:**************


SelI_Phytophtor   SLSAAVHIVITVVWEVKNVLGVSVFTIPHSSKFKLKTNSKPAAKS
PHYCAscaffold_2   SLAAYVHIVITVVWEVKNVLGVSVFTIP-----------------

cons              **:* ***********************                 


SelI_Phytophtor   SXFVGHAVG
PHYCAscaffold_2   ---------

cons