genewise output
Score 356.38 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

gi|299471650|em  168 REDAAEYFSGNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEG 
                     R++ A+YFSGN  +PG  P AH Y G QFG+FAGQLGDG A  LGE+   
                     RDNIAQYFSGNVTLPGMVPAAHCYAGTQFGNFAGQLGDGRATNLGEITN 
supercont1.1171 8035 cgaagcttagagaccgagcggcttggactgatggctgggcgaatggaaa 
                     gaatcaatggatctcgttcccagacgcatgatcgatgaggccatgatca 
                     actacgcctctgtgacggtcacccctagccctcagaatgagctatgcgc 


gi|299471650|em  217 PSG-RWEIQFKGAGLTPYSRSA                          G 
                       G +WE+Q+KGAGLTPYSR+A                          G 
                     KRGQKWELQLKGAGLTPYSRTA          D:D[gac]        G 
supercont1.1171 8182 acgcatgcctagggtacttaagGGTGCGTT  Intron 1   CAGACg 
                     aggaagatatagcgtccacgcc <1-----[8249 : 8675]-1>  g 
                     agcgagggggattggcgtcgaa                          c 


gi|299471650|em  240 RKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQ 
                     R V RSSIRE++CSE MH LGI TTRAA+LVTSDT V RD +Y G+ I+ 
                     RAVFRSSIREYICSEHMHALGIATTRAASLVTSDTLVVRDPMYDGHTIE 
supercont1.1171 8681 cggtcttacgtatagcacgcgagaacggtcgatgacggcgcatggcaag 
                     gcttgcctgaatggaatactgtcccgcccttccactttgactaagacta 
                     gttcggctcgccccatgcagttacacaccaccactggaaccgtcaccaa 


gi|299471650|em  289 ERASIVTRLAPTFLRFGSFEIFKPRDPRTGRD                  
                     E++++V RLAP+FLRFGS+E+F   D RTGR                   
                     EQSTVVLRLAPSFLRFGSWEVFLGEDERTGRA                  
supercont1.1171 8828 gctaggtccgcttcctgttggtcggggaagcg                  
                     aacctttgtcccttgtgcgatttgaaagcggc                  
                     agcaagagacagccctcggggtgcgcagtatg                  


gi|299471650|em  321                           PSAGND--ALRLQMLEYAIGRFF 
                                               PSAG +   L  QML++ +   + 
                               G:G[ggg]        PSAGAEHFPLAKQMLDHVVSTHY 
supercont1.1171 8924 GGTATGTC  Intron 2   CAGGGctggggctccgacacgcggtact 
                      <1-----[8925 : 9310]-1>  cccgcaatctcaattaattccaa 
                                               ggttggcttgcgggaccagctcc 


gi|299471650|em  343 PGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQ                
                     P   AA  +    RY+A+++E V  TAE  AKWQ                
                     PDIWAA-HDNDTDRYIAFFQELVDRTAETCAKWQ                
supercont1.1171 9382 cgatgg cgagagatagttcgtggcaggatgatc                
                     catgcc aaaacagatcttaattagccacgcaga                
                     tccgtc tcccacactcccgagctcgagcttggg                


gi|299471650|em  377                        CVGFTHGVLNTDNMSILGLTIDYGPY 
                                             VGF HGVLNTDNMSILGLTIDYGPY 
                                            GVGFVHGVLNTDNMSILGLTIDYGPY 
supercont1.1171 9481 GTGTGGC  Intron 3   TAGgggtgcggcaagaaaacgcaagtgct 
                     <0-----[9481 : 9996]-0>gtgttagttacaatgttgtctaagca 
                                            tagtgctgccatcgtcgggctctagt 


gi|299471650|em  403 GFMDFFDPKFVPNGSDGGGRYSYERQPEMCK                   
                     GFM +FD  +VPN SD  GRY Y+ QP +CK                   
                     GFMGYFDSDMVPNHSDTTGRYRYQNQPGICK                   
supercont1.117110075 gtagttgtgagcactgaagctctcaccgata                   
                     gttgatacattcaacaccggagaaaacgtga                   
                     ccgacttgtgcctcaccaagtacgcggtcta                   


gi|299471650|em  434                           NLHKFAEAV--APALPLSDSTAA 
                                               NL ++A+A+     + +S+ +   
                                W:W[tgg]       NLTRLAQALDTSGVICMSNLSPV 
supercont1.117110168 TGGTAAGGG  Intron 4   CAGGataccgcgtgatggatatactcg 
                       <2-----[10170:10403]-2> atcgtcactaccgttgtcatcct 
                                               cggaggggaccatctcgtcgaag 


gi|299471650|em  456 LEKYDGLFKGYYEEGMRRK                       LGLF-SV 
                     +E YD +++ +Y   M  K                       LGL+ SV 
                     IENYDAVLRRHYSATMLAK                       LGLIRSV 
supercont1.117110474 agatgggtccctagaacgaGTAAGTC  Intron 5   CAGcgcactg 
                     taaaacttggaagccttca<0-----[10531:10910]-0>tgttgct 
                     agccccgacatctacgaag                       gtatgta 


gi|299471650|em  481 EEDDDGLFESLFATMADTSADFTGTFRELAQL                  
                     EE D  L   LFATM DT  D+T  FRELA +                  
                     EESDRELVSELFATMNDTGCDMTALFRELADV                  
supercont1.117110932 ggtgcgcgtgctgaaagagtgaagctcgtggg                  
                     aacagattcattcctaacggatccttgatcat                  
                     gacctgggtggtccgtcggtcgtggctgagcg                  


//
Making a D in phase 1 intron
Making a G in phase 1 intron
Making a W in phase 2 intron
>supercont1.1171:subseq(1485,19096).pep
RDNIAQYFSGNVTLPGMVPAAHCYAGTQFGNFAGQLGDGRATNLGEITNKRGQKWELQLK
GAGLTPYSRTADGRAVFRSSIREYICSEHMHALGIATTRAASLVTSDTLVVRDPMYDGHT
IEEQSTVVLRLAPSFLRFGSWEVFLGEDERTGRAGPSAGAEHFPLAKQMLDHVVSTHYPD
IWAAHDNDTDRYIAFFQELVDRTAETCAKWQGVGFVHGVLNTDNMSILGLTIDYGPYGFM
GYFDSDMVPNHSDTTGRYRYQNQPGICKWNLTRLAQALDTSGVICMSNLSPVIENYDAVL
RRHYSATMLAKLGLIRSVEESDRELVSELFATMNDTGCDMTALFRELADV
//
>supercont1.1171:subseq(1485,19096).[8035:11027].sp
CGAGACAATATAGCCCAGTACTTCAGTGGCAATGTGACTCTGCCAGGCATGGTGCCTGCC
GCACACTGCTACGCCGGTACACAGTTCGGCAACTTTGCCGGACAGTTAGGAGATGGGCGA
GCGACCAATTTAGGTGAGATCACGAACAAACGGGGCCAGAAATGGGAGCTGCAGTTGAAA
GGTGCTGGGTTGACCCCGTATTCCAGGACAGCAGACGGCCGGGCTGTTTTCCGGTCGTCC
ATTCGCGAGTACATCTGCAGCGAACATATGCACGCACTGGGTATTGCAACCACACGCGCA
GCCTCCCTAGTCACCTCAGACACTCTGGTGGTACGAGACCCCATGTATGACGGACACACC
ATAGAAGAACAGTCCACAGTAGTGTTACGGCTAGCCCCATCGTTCCTCCGCTTTGGCTCG
TGGGAGGTGTTTCTGGGCGAGGACGAAAGGACTGGACGTGCGGGGCCGTCGGCTGGTGCG
GAGCACTTTCCTCTGGCCAAGCAGATGCTAGACCACGTAGTGTCCACTCACTACCCTGAC
ATCTGGGCTGCCCATGACAACGACACAGACAGATACATTGCCTTCTTCCAGGAATTGGTC
GATCGCACGGCAGAGACCTGTGCTAAGTGGCAGGGTGTAGGGTTTGTGCACGGTGTGCTC
AACACAGATAACATGAGTATCCTGGGGCTGACCATTGACTATGGACCGTATGGCTTCATG
GGATACTTTGATTCGGATATGGTCCCCAATCACTCAGACACCACAGGACGGTATCGATAC
CAGAACCAGCCGGGTATCTGTAAATGGAACTTGACGCGACTGGCGCAGGCGTTAGACACC
TCAGGTGTCATTTGCATGTCTAACCTGTCACCAGTGATAGAGAACTACGACGCCGTGTTA
CGCCGACATTACAGTGCAACCATGCTAGCAAAGCTGGGTCTAATTCGGTCTGTAGAGGAA
TCCGACCGTGAGCTGGTGTCTGAGCTGTTTGCCACCATGAATGACACGGGGTGTGACATG
ACTGCGCTGTTCCGTGAGTTAGCGGACGTG
//
supercont1.1171:subseq(1485,19096)	GeneWise	match	8035	11027	358.37	+	.	supercont1.1171:subseq(1485,19096)-genewise-prediction-1
supercont1.1171:subseq(1485,19096)	GeneWise	cds	8035	8248	0.00	+	0	supercont1.1171:subseq(1485,19096)-genewise-prediction-1
supercont1.1171:subseq(1485,19096)	GeneWise	intron	8249	8675	0.00	+	.	supercont1.1171:subseq(1485,19096)-genewise-prediction-1
supercont1.1171:subseq(1485,19096)	GeneWise	cds	8676	8924	0.00	+	2	supercont1.1171:subseq(1485,19096)-genewise-prediction-1
supercont1.1171:subseq(1485,19096)	GeneWise	intron	8925	9310	0.00	+	.	supercont1.1171:subseq(1485,19096)-genewise-prediction-1
supercont1.1171:subseq(1485,19096)	GeneWise	cds	9311	9480	0.00	+	2	supercont1.1171:subseq(1485,19096)-genewise-prediction-1
supercont1.1171:subseq(1485,19096)	GeneWise	intron	9481	9996	0.00	+	.	supercont1.1171:subseq(1485,19096)-genewise-prediction-1
supercont1.1171:subseq(1485,19096)	GeneWise	cds	9997	10169	0.00	+	0	supercont1.1171:subseq(1485,19096)-genewise-prediction-1
supercont1.1171:subseq(1485,19096)	GeneWise	intron	10170	10403	0.00	+	.	supercont1.1171:subseq(1485,19096)-genewise-prediction-1
supercont1.1171:subseq(1485,19096)	GeneWise	cds	10404	10530	0.00	+	1	supercont1.1171:subseq(1485,19096)-genewise-prediction-1
supercont1.1171:subseq(1485,19096)	GeneWise	intron	10531	10910	0.00	+	.	supercont1.1171:subseq(1485,19096)-genewise-prediction-1
supercont1.1171:subseq(1485,19096)	GeneWise	cds	10911	11027	0.00	+	0	supercont1.1171:subseq(1485,19096)-genewise-prediction-1
//